RNA–Protein interactions for RNA: ENST00000518060.5

SPIDR-205, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SPIDR, Length 482 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-205ENST00000518060 ATL3Q6DD88 541 aa11.4□□□□□ -0.58
SPIDR-205ENST00000518060 TANGO2Q6ICL3 276 aa11.4□□□□□ -0.58
SPIDR-205ENST00000518060 CENPPQ6IPU0 288 aa11.4□□□□□ -0.58
SPIDR-205ENST00000518060 UNC13DQ70J99 1090 aa11.4□□□□□ -0.58
SPIDR-205ENST00000518060 NT5DC4Q86YG4 428 aa11.4□□□□□ -0.58
SPIDR-205ENST00000518060 CBWD2Q8IUF1 395 aa11.4□□□□□ -0.58
SPIDR-205ENST00000518060 CCDC105Q8IYK2 499 aa11.4□□□□□ -0.58
SPIDR-205ENST00000518060 GRAMD1CQ8IYS0 662 aa11.4□□□□□ -0.58
SPIDR-205ENST00000518060 CSGALNACT2Q8N6G5 542 aa11.4□□□□□ -0.58
SPIDR-205ENST00000518060 C1orf127Q8N9H9 656 aa11.4□□□□□ -0.58
SPIDR-205ENST00000518060 DTWD2Q8NBA8 298 aa11.4□□□□□ -0.58
SPIDR-205ENST00000518060 SHDQ96IW2 340 aa11.4□□□□□ -0.58
SPIDR-205ENST00000518060 ANKRD36BP1Q96IX9 119 aa11.4□□□□□ -0.58
SPIDR-205ENST00000518060 GCNAQ96QF7 691 aa11.4□□□□□ -0.58
SPIDR-205ENST00000518060 ZFP14Q9HCL3 533 aa11.4□□□□□ -0.58
SPIDR-205ENST00000518060 AVENQ9NQS1 362 aaPredicted RBP11.4□□□□□ -0.58
SPIDR-205ENST00000518060 HSPBP1Q9NZL4 362 aa11.4□□□□□ -0.58
SPIDR-205ENST00000518060 CACNA1HO95180 2353 aa11.4□□□□□ -0.58
SPIDR-205ENST00000518060 ZNF233A6NK53 670 aa11.39□□□□□ -0.59
SPIDR-205ENST00000518060 KIAA0391O15091 583 aaKnown RBP11.39□□□□□ -0.59
SPIDR-205ENST00000518060 EIF3DO15371 548 aaKnown RBP eCLIP11.39□□□□□ -0.59
SPIDR-205ENST00000518060 HUS1O60921 280 aa11.39□□□□□ -0.59
SPIDR-205ENST00000518060 ECI2O75521 394 aa11.39□□□□□ -0.59
SPIDR-205ENST00000518060 VNN2O95498 520 aa11.39□□□□□ -0.59
SPIDR-205ENST00000518060 CYP11A1P05108 521 aa11.39□□□□□ -0.59
SPIDR-205ENST00000518060 KRT85P78386 507 aa11.39□□□□□ -0.59
SPIDR-205ENST00000518060 RBP5P82980 135 aa11.39□□□□□ -0.59
SPIDR-205ENST00000518060 SLC44A4Q53GD3 710 aa11.39□□□□□ -0.59
SPIDR-205ENST00000518060 TPRG1Q6ZUI0 275 aa11.39□□□□□ -0.59
SPIDR-205ENST00000518060 HS2ST1Q7LGA3 356 aa11.39□□□□□ -0.59
SPIDR-205ENST00000518060 ITIH5Q86UX2 942 aa11.39□□□□□ -0.59
SPIDR-205ENST00000518060 DCP1BQ8IZD4 617 aaKnown RBP11.39□□□□□ -0.59
SPIDR-205ENST00000518060 RDH13Q8NBN7 331 aa11.39□□□□□ -0.59
SPIDR-205ENST00000518060 SHKBP1Q8TBC3 707 aa11.39□□□□□ -0.59
SPIDR-205ENST00000518060 ZSCAN18Q8TBC5 510 aaPredicted RBP11.39□□□□□ -0.59
SPIDR-205ENST00000518060 ELSPBP1Q96BH3 223 aa11.39□□□□□ -0.59
SPIDR-205ENST00000518060 SPATA32Q96LK8 384 aa11.39□□□□□ -0.59
SPIDR-205ENST00000518060 ZSWIM3Q96MP5 696 aa11.39□□□□□ -0.59
SPIDR-205ENST00000518060 C7orf25Q9BPX7 421 aa11.39□□□□□ -0.59
SPIDR-205ENST00000518060 LPIN3Q9BQK8 851 aa11.39□□□□□ -0.59
SPIDR-205ENST00000518060 ZCWPW1Q9H0M4 648 aa11.39□□□□□ -0.59
SPIDR-205ENST00000518060 DNAJC25Q9H1X3 360 aa11.39□□□□□ -0.59
SPIDR-205ENST00000518060 ATXN3LQ9H3M9 355 aa11.39□□□□□ -0.59
SPIDR-205ENST00000518060 BRD9Q9H8M2 597 aa11.39□□□□□ -0.59
SPIDR-205ENST00000518060 SLC39A2Q9NP94 309 aa11.39□□□□□ -0.59
SPIDR-205ENST00000518060 AGPAT3Q9NRZ7 376 aa11.39□□□□□ -0.59
SPIDR-205ENST00000518060 ITGA11Q9UKX5 1188 aa11.39□□□□□ -0.59
SPIDR-205ENST00000518060 SIT1Q9Y3P8 196 aa11.39□□□□□ -0.59
SPIDR-205ENST00000518060 SNX9Q9Y5X1 595 aa11.39□□□□□ -0.59
SPIDR-205ENST00000518060 DOCK8Q8NF50 2099 aa11.39□□□□□ -0.59
SPIDR-205ENST00000518060 WDFY4Q6ZS81 3184 aa11.38□□□□□ -0.59
SPIDR-205ENST00000518060 UBE4BO95155 1302 aa11.38□□□□□ -0.59
SPIDR-205ENST00000518060 NRG2O14511 850 aaPredicted RBP11.38□□□□□ -0.59
SPIDR-205ENST00000518060 CLIC2O15247 247 aa11.38□□□□□ -0.59
SPIDR-205ENST00000518060 DLATP10515 647 aaKnown RBP11.38□□□□□ -0.59
SPIDR-205ENST00000518060 TNNI1P19237 187 aa11.38□□□□□ -0.59
SPIDR-205ENST00000518060 ACAT1P24752 427 aaKnown RBP11.38□□□□□ -0.59
SPIDR-205ENST00000518060 GDI1P31150 447 aa11.38□□□□□ -0.59
SPIDR-205ENST00000518060 VIPR2P41587 438 aa11.38□□□□□ -0.59
SPIDR-205ENST00000518060 TUFMP49411 452 aaKnown RBP11.38□□□□□ -0.59
SPIDR-205ENST00000518060 MYL7Q01449 175 aa11.38□□□□□ -0.59
SPIDR-205ENST00000518060 MYO1EQ12965 1108 aa11.38□□□□□ -0.59
SPIDR-205ENST00000518060 CUL4BQ13620 913 aa11.38□□□□□ -0.59
SPIDR-205ENST00000518060 ANGPT1Q15389 498 aa11.38□□□□□ -0.59
SPIDR-205ENST00000518060 ARHGAP15Q53QZ3 475 aa11.38□□□□□ -0.59
SPIDR-205ENST00000518060 GPR158Q5T848 1215 aa11.38□□□□□ -0.59
SPIDR-205ENST00000518060 GPIHBP1Q8IV16 184 aa11.38□□□□□ -0.59
SPIDR-205ENST00000518060 YAF2Q8IY57 180 aa11.38□□□□□ -0.59
SPIDR-205ENST00000518060 ADGRF2Q8IZF7 708 aa11.38□□□□□ -0.59
SPIDR-205ENST00000518060 PDCL2Q8N4E4 241 aa11.38□□□□□ -0.59
SPIDR-205ENST00000518060 LRRC52Q8N7C0 313 aa11.38□□□□□ -0.59
SPIDR-205ENST00000518060 GIPC2Q8TF65 315 aa11.38□□□□□ -0.59
SPIDR-205ENST00000518060 SMARCD2Q92925 531 aa11.38□□□□□ -0.59
SPIDR-205ENST00000518060 CCDC127Q96BQ5 260 aa11.38□□□□□ -0.59
SPIDR-205ENST00000518060 CHAMP1Q96JM3 812 aa11.38□□□□□ -0.59
SPIDR-205ENST00000518060 ASB16Q96NS5 453 aa11.38□□□□□ -0.59
SPIDR-205ENST00000518060 FNBP1Q96RU3 617 aa11.38□□□□□ -0.59
SPIDR-205ENST00000518060 TRMT61BQ9BVS5 477 aaKnown RBP11.38□□□□□ -0.59
SPIDR-205ENST00000518060 PLA2G2FQ9BZM2 168 aa11.38□□□□□ -0.59
SPIDR-205ENST00000518060 EXOC1Q9NV70 894 aa11.38□□□□□ -0.59
SPIDR-205ENST00000518060 DDX43Q9NXZ2 648 aaKnown RBP11.38□□□□□ -0.59
SPIDR-205ENST00000518060 SERTAD1Q9UHV2 236 aa11.38□□□□□ -0.59
SPIDR-205ENST00000518060 L1RE1Q9UN81 338 aa11.38□□□□□ -0.59
SPIDR-205ENST00000518060 MYH15Q9Y2K3 1946 aa11.38□□□□□ -0.59
SPIDR-205ENST00000518060 A0A1B0GVL5 298 aa11.37□□□□□ -0.59
SPIDR-205ENST00000518060 DPYSL4O14531 572 aa11.37□□□□□ -0.59
SPIDR-205ENST00000518060 PRPF40AO75400 957 aaKnown RBP11.37□□□□□ -0.59
SPIDR-205ENST00000518060 MICAL2O94851 1124 aa11.37□□□□□ -0.59
SPIDR-205ENST00000518060 PFKFB1P16118 471 aa11.37□□□□□ -0.59
SPIDR-205ENST00000518060 CD72P21854 359 aa11.37□□□□□ -0.59
SPIDR-205ENST00000518060 FCARP24071 287 aa11.37□□□□□ -0.59
SPIDR-205ENST00000518060 GABRR2P28476 465 aa11.37□□□□□ -0.59
SPIDR-205ENST00000518060 HOXD13P35453 343 aa11.37□□□□□ -0.59
SPIDR-205ENST00000518060 PRKCQQ04759 706 aa11.37□□□□□ -0.59
SPIDR-205ENST00000518060 SURF1Q15526 300 aa11.37□□□□□ -0.59
SPIDR-205ENST00000518060 SNRNP35Q16560 246 aaKnown RBP11.37□□□□□ -0.59
SPIDR-205ENST00000518060 DUOXA2Q1HG44 320 aa11.37□□□□□ -0.59
SPIDR-205ENST00000518060 STXBP5Q5T5C0 1151 aa11.37□□□□□ -0.59
SPIDR-205ENST00000518060 PHLDB3Q6NSJ2 640 aa11.37□□□□□ -0.59
SPIDR-205ENST00000518060 FRMD5Q7Z6J6 570 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms