RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 ISL2Q96A47 359 aa3.93□□□□□ -1.78
CPNE3-204ENST00000517862 MISP3Q96FF7 219 aa3.93□□□□□ -1.78
CPNE3-204ENST00000517862 CCDC136Q96JN2 1154 aa3.93□□□□□ -1.78
CPNE3-204ENST00000517862 DHRS1Q96LJ7 313 aa3.93□□□□□ -1.78
CPNE3-204ENST00000517862 TBC1D32Q96NH3 1257 aa3.93□□□□□ -1.78
CPNE3-204ENST00000517862 FANCD2OSQ96PS1 177 aa3.93□□□□□ -1.78
CPNE3-204ENST00000517862 NELL2Q99435 816 aa3.93□□□□□ -1.78
CPNE3-204ENST00000517862 OSBPL5Q9H0X9 879 aaPredicted RBP3.93□□□□□ -1.78
CPNE3-204ENST00000517862 MROH8Q9H579 483 aa3.93□□□□□ -1.78
CPNE3-204ENST00000517862 DISC1Q9NRI5 854 aa3.93□□□□□ -1.78
CPNE3-204ENST00000517862 CRIM1Q9NZV1 1036 aa3.93□□□□□ -1.78
CPNE3-204ENST00000517862 MAGEC2Q9UBF1 373 aaPredicted RBP3.93□□□□□ -1.78
CPNE3-204ENST00000517862 DIS3Q9Y2L1 958 aaKnown RBP3.93□□□□□ -1.78
CPNE3-204ENST00000517862 MYH7BA7E2Y1 1941 aa3.93□□□□□ -1.78
CPNE3-204ENST00000517862 ADGRA3Q8IWK6 1321 aa3.93□□□□□ -1.78
CPNE3-204ENST00000517862 KNTC1P50748 2209 aa3.93□□□□□ -1.78
CPNE3-204ENST00000517862 MYH15Q9Y2K3 1946 aa3.92□□□□□ -1.78
CPNE3-204ENST00000517862 DNAJC25-GNG10A0A024R161 153 aa3.92□□□□□ -1.78
CPNE3-204ENST00000517862 FANCGO15287 622 aa3.92□□□□□ -1.78
CPNE3-204ENST00000517862 DLX3O60479 287 aa3.92□□□□□ -1.78
CPNE3-204ENST00000517862 JMJD7P0C870 316 aa3.92□□□□□ -1.78
CPNE3-204ENST00000517862 FGFR1P11362 822 aa3.92□□□□□ -1.78
CPNE3-204ENST00000517862 CXCL12P48061 93 aa3.92□□□□□ -1.78
CPNE3-204ENST00000517862 RAB27AP51159 221 aa3.92□□□□□ -1.78
CPNE3-204ENST00000517862 HMGA2P52926 109 aa3.92□□□□□ -1.78
CPNE3-204ENST00000517862 TMPRSS3P57727 454 aa3.92□□□□□ -1.78
CPNE3-204ENST00000517862 HNRNPUQ00839 825 aaKnown RBP eCLIP3.92□□□□□ -1.78
CPNE3-204ENST00000517862 SATB1Q01826 763 aa3.92□□□□□ -1.78
CPNE3-204ENST00000517862 SEMG2Q02383 582 aa3.92□□□□□ -1.78
CPNE3-204ENST00000517862 ITKQ08881 620 aa3.92□□□□□ -1.78
CPNE3-204ENST00000517862 CCDC173Q0VFZ6 552 aa3.92□□□□□ -1.78
CPNE3-204ENST00000517862 AIMP1Q12904 312 aaKnown RBP3.92□□□□□ -1.78
CPNE3-204ENST00000517862 SEMA3BQ13214 749 aa3.92□□□□□ -1.78
CPNE3-204ENST00000517862 BTG3Q14201 252 aaPredicted RBP3.92□□□□□ -1.78
CPNE3-204ENST00000517862 PLS1Q14651 629 aa3.92□□□□□ -1.78
CPNE3-204ENST00000517862 NFKBIBQ15653 356 aa3.92□□□□□ -1.78
CPNE3-204ENST00000517862 TRIP6Q15654 476 aaKnown RBP3.92□□□□□ -1.78
CPNE3-204ENST00000517862 SMTNL2Q2TAL5 461 aa3.92□□□□□ -1.78
CPNE3-204ENST00000517862 SPATS1Q496A3 300 aa3.92□□□□□ -1.78
CPNE3-204ENST00000517862 CDC42EP5Q6NZY7 148 aa3.92□□□□□ -1.78
CPNE3-204ENST00000517862 SPNS3Q6ZMD2 512 aa3.92□□□□□ -1.78
CPNE3-204ENST00000517862 TMPRSS7Q7RTY8 843 aa3.92□□□□□ -1.78
CPNE3-204ENST00000517862 C14orf80Q86SX3 495 aa3.92□□□□□ -1.78
CPNE3-204ENST00000517862 WFDC3Q8IUB2 231 aa3.92□□□□□ -1.78
CPNE3-204ENST00000517862 LINC01465Q8N7H1 131 aa3.92□□□□□ -1.78
CPNE3-204ENST00000517862 RNF214Q8ND24 703 aa3.92□□□□□ -1.78
CPNE3-204ENST00000517862 BVESQ8NE79 360 aa3.92□□□□□ -1.78
CPNE3-204ENST00000517862 CHST13Q8NET6 341 aa3.92□□□□□ -1.78
CPNE3-204ENST00000517862 DBF4BQ8NFT6 615 aa3.92□□□□□ -1.78
CPNE3-204ENST00000517862 WDR66Q8TBY9 1149 aa3.92□□□□□ -1.78
CPNE3-204ENST00000517862 ZNF507Q8TCN5 953 aa3.92□□□□□ -1.78
CPNE3-204ENST00000517862 PPP1R13LQ8WUF5 828 aa3.92□□□□□ -1.78
CPNE3-204ENST00000517862 CYB5D2Q8WUJ1 264 aa3.92□□□□□ -1.78
CPNE3-204ENST00000517862 AFG1LQ8WV93 481 aa3.92□□□□□ -1.78
CPNE3-204ENST00000517862 MRGPRX3Q96LB0 322 aa3.92□□□□□ -1.78
CPNE3-204ENST00000517862 C8orf48Q96LL4 319 aa3.92□□□□□ -1.78
CPNE3-204ENST00000517862 TRIM8Q9BZR9 551 aa3.92□□□□□ -1.78
CPNE3-204ENST00000517862 SPATC1LQ9H0A9 340 aa3.92□□□□□ -1.78
CPNE3-204ENST00000517862 AP5M1Q9H0R1 490 aa3.92□□□□□ -1.78
CPNE3-204ENST00000517862 GBP3Q9H0R5 595 aa3.92□□□□□ -1.78
CPNE3-204ENST00000517862 CPNE5Q9HCH3 593 aa3.92□□□□□ -1.78
CPNE3-204ENST00000517862 ADAMTS6Q9UKP5 1117 aa3.92□□□□□ -1.78
CPNE3-204ENST00000517862 AKT3Q9Y243 479 aa3.92□□□□□ -1.78
CPNE3-204ENST00000517862 TRAF6Q9Y4K3 522 aa3.92□□□□□ -1.78
CPNE3-204ENST00000517862 GON4LQ3T8J9 2241 aa3.92□□□□□ -1.78
CPNE3-204ENST00000517862 ROCK2O75116 1388 aaKnown RBP3.91□□□□□ -1.78
CPNE3-204ENST00000517862 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.91□□□□□ -1.78
CPNE3-204ENST00000517862 ATP9AO75110 1047 aa3.91□□□□□ -1.78
CPNE3-204ENST00000517862 PPM1BO75688 479 aa3.91□□□□□ -1.78
CPNE3-204ENST00000517862 RPP40O75818 363 aaKnown RBP3.91□□□□□ -1.78
CPNE3-204ENST00000517862 ADH5P11766 374 aa3.91□□□□□ -1.78
CPNE3-204ENST00000517862 HLA-EP13747 358 aa3.91□□□□□ -1.78
CPNE3-204ENST00000517862 CD247P20963 164 aa3.91□□□□□ -1.78
CPNE3-204ENST00000517862 GNALP38405 381 aa3.91□□□□□ -1.78
CPNE3-204ENST00000517862 CAP2P40123 477 aa3.91□□□□□ -1.78
CPNE3-204ENST00000517862 NEK2P51955 445 aa3.91□□□□□ -1.78
CPNE3-204ENST00000517862 EPHB1P54762 984 aa3.91□□□□□ -1.78
CPNE3-204ENST00000517862 OXCT1P55809 520 aa3.91□□□□□ -1.78
CPNE3-204ENST00000517862 RHBDL3P58872 404 aa3.91□□□□□ -1.78
CPNE3-204ENST00000517862 ERVFC1P60507 584 aa3.91□□□□□ -1.78
CPNE3-204ENST00000517862 GPC5P78333 572 aa3.91□□□□□ -1.78
CPNE3-204ENST00000517862 HNRNPDQ14103 355 aaKnown RBP3.91□□□□□ -1.78
CPNE3-204ENST00000517862 MAP7Q14244 749 aa3.91□□□□□ -1.78
CPNE3-204ENST00000517862 STAT4Q14765 748 aa3.91□□□□□ -1.78
CPNE3-204ENST00000517862 NTRK3Q16288 839 aa3.91□□□□□ -1.78
CPNE3-204ENST00000517862 MAP9Q49MG5 647 aa3.91□□□□□ -1.78
CPNE3-204ENST00000517862 SLC44A4Q53GD3 710 aa3.91□□□□□ -1.78
CPNE3-204ENST00000517862 SGO2Q562F6 1265 aa3.91□□□□□ -1.78
CPNE3-204ENST00000517862 TRIM61Q5EBN2 209 aa3.91□□□□□ -1.78
CPNE3-204ENST00000517862 EXOSC6Q5RKV6 272 aaKnown RBP3.91□□□□□ -1.78
CPNE3-204ENST00000517862 HP1BP3Q5SSJ5 553 aaPredicted RBP3.91□□□□□ -1.78
CPNE3-204ENST00000517862 TMEM63BQ5T3F8 832 aa3.91□□□□□ -1.78
CPNE3-204ENST00000517862 GORABQ5T7V8 394 aa3.91□□□□□ -1.78
CPNE3-204ENST00000517862 RSPO2Q6UXX9 243 aaPredicted RBP3.91□□□□□ -1.78
CPNE3-204ENST00000517862 C15orf52Q6ZUT6 534 aaKnown RBP3.91□□□□□ -1.78
CPNE3-204ENST00000517862 TOGARAM2Q6ZUX3 1019 aa3.91□□□□□ -1.78
CPNE3-204ENST00000517862 DYMQ7RTS9 669 aa3.91□□□□□ -1.78
CPNE3-204ENST00000517862 MAMDC2Q7Z304 686 aaPredicted RBP3.91□□□□□ -1.78
CPNE3-204ENST00000517862 TLK2Q86UE8 772 aa3.91□□□□□ -1.78
CPNE3-204ENST00000517862 TRIM59Q8IWR1 403 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms