RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 CBWD6Q4V339 395 aa11.39□□□□□ -0.59
PCDHGA1-202ENST00000517417 CBWD3Q5JTY5 395 aa11.39□□□□□ -0.59
PCDHGA1-202ENST00000517417 CBWD5Q5RIA9 395 aa11.39□□□□□ -0.59
PCDHGA1-202ENST00000517417 RASIP1Q5U651 963 aa11.39□□□□□ -0.59
PCDHGA1-202ENST00000517417 TRIM72Q6ZMU5 477 aa11.39□□□□□ -0.59
PCDHGA1-202ENST00000517417 RAB44Q7Z6P3 723 aaPredicted RBP11.39□□□□□ -0.59
PCDHGA1-202ENST00000517417 TRIM55Q9BYV6 548 aa11.39□□□□□ -0.59
PCDHGA1-202ENST00000517417 ALG13Q9NP73 1137 aaKnown RBP11.39□□□□□ -0.59
PCDHGA1-202ENST00000517417 STAP1Q9ULZ2 295 aa11.39□□□□□ -0.59
PCDHGA1-202ENST00000517417 COL14A1Q05707 1796 aaKnown RBP11.38□□□□□ -0.59
PCDHGA1-202ENST00000517417 ASTN1O14525 1302 aa11.38□□□□□ -0.59
PCDHGA1-202ENST00000517417 MAP3K7O43318 606 aa11.38□□□□□ -0.59
PCDHGA1-202ENST00000517417 HAUS5O94927 633 aa11.38□□□□□ -0.59
PCDHGA1-202ENST00000517417 AP1B1Q10567 949 aa11.38□□□□□ -0.59
PCDHGA1-202ENST00000517417 C2CD6Q53TS8 623 aa11.38□□□□□ -0.59
PCDHGA1-202ENST00000517417 ANKMY2Q8IV38 441 aa11.38□□□□□ -0.59
PCDHGA1-202ENST00000517417 RBBP8NLQ8NC74 664 aaPredicted RBP11.38□□□□□ -0.59
PCDHGA1-202ENST00000517417 ATXN2LQ8WWM7 1075 aaKnown RBP11.38□□□□□ -0.59
PCDHGA1-202ENST00000517417 VPS39Q96JC1 886 aa11.38□□□□□ -0.59
PCDHGA1-202ENST00000517417 RXFP1Q9HBX9 757 aa11.38□□□□□ -0.59
PCDHGA1-202ENST00000517417 MYH10P35580 1976 aa11.38□□□□□ -0.59
PCDHGA1-202ENST00000517417 NCANO14594 1321 aa11.38□□□□□ -0.59
PCDHGA1-202ENST00000517417 GOLGA8RI6L899 631 aa11.38□□□□□ -0.59
PCDHGA1-202ENST00000517417 ARP10275 920 aa11.38□□□□□ -0.59
PCDHGA1-202ENST00000517417 PDGFRAP16234 1089 aa11.38□□□□□ -0.59
PCDHGA1-202ENST00000517417 MARCKSL1P49006 195 aa11.38□□□□□ -0.59
PCDHGA1-202ENST00000517417 MOXD1Q6UVY6 613 aa11.38□□□□□ -0.59
PCDHGA1-202ENST00000517417 MAGEB18Q96M61 343 aa11.38□□□□□ -0.59
PCDHGA1-202ENST00000517417 MOV10L1Q9BXT6 1211 aaKnown RBP11.38□□□□□ -0.59
PCDHGA1-202ENST00000517417 COL1A1P02452 1464 aaPredicted RBP11.38□□□□□ -0.59
PCDHGA1-202ENST00000517417 CFAP69A5D8W1 941 aa11.38□□□□□ -0.59
PCDHGA1-202ENST00000517417 HLA-DRAP01903 254 aa11.38□□□□□ -0.59
PCDHGA1-202ENST00000517417 CTSHP09668 335 aa11.38□□□□□ -0.59
PCDHGA1-202ENST00000517417 RARAP10276 462 aa11.38□□□□□ -0.59
PCDHGA1-202ENST00000517417 CACNB2Q08289 660 aaPredicted RBP11.38□□□□□ -0.59
PCDHGA1-202ENST00000517417 ARSHQ5FYA8 562 aa11.38□□□□□ -0.59
PCDHGA1-202ENST00000517417 THEM5Q8N1Q8 247 aa11.38□□□□□ -0.59
PCDHGA1-202ENST00000517417 WHRNQ9P202 907 aa11.38□□□□□ -0.59
PCDHGA1-202ENST00000517417 HAO1Q9UJM8 370 aa11.38□□□□□ -0.59
PCDHGA1-202ENST00000517417 BAG5Q9UL15 447 aa11.38□□□□□ -0.59
PCDHGA1-202ENST00000517417 ATP8B3O60423 1300 aa11.37□□□□□ -0.59
PCDHGA1-202ENST00000517417 ZWINTO95229 277 aa11.37□□□□□ -0.59
PCDHGA1-202ENST00000517417 PRELID2Q8N945 189 aa11.37□□□□□ -0.59
PCDHGA1-202ENST00000517417 ALG3Q92685 438 aa11.37□□□□□ -0.59
PCDHGA1-202ENST00000517417 LRGUKQ96M69 825 aa11.37□□□□□ -0.59
PCDHGA1-202ENST00000517417 TUBB6Q9BUF5 446 aa11.37□□□□□ -0.59
PCDHGA1-202ENST00000517417 FSD1LQ9BXM9 530 aa11.37□□□□□ -0.59
PCDHGA1-202ENST00000517417 NPHS2Q9NP85 383 aa11.37□□□□□ -0.59
PCDHGA1-202ENST00000517417 OLFML3Q9NRN5 406 aa11.37□□□□□ -0.59
PCDHGA1-202ENST00000517417 CTNNAL1Q9UBT7 734 aa11.37□□□□□ -0.59
PCDHGA1-202ENST00000517417 HACL1Q9UJ83 578 aa11.37□□□□□ -0.59
PCDHGA1-202ENST00000517417 GTF3C4Q9UKN8 822 aa11.37□□□□□ -0.59
PCDHGA1-202ENST00000517417 NR2E1Q9Y466 385 aa11.37□□□□□ -0.59
PCDHGA1-202ENST00000517417 UBR2Q8IWV8 1755 aa11.37□□□□□ -0.59
PCDHGA1-202ENST00000517417 NUP188Q5SRE5 1749 aa11.37□□□□□ -0.59
PCDHGA1-202ENST00000517417 TNPO2O14787 897 aaKnown RBP11.37□□□□□ -0.59
PCDHGA1-202ENST00000517417 HSPA4LO95757 839 aa11.37□□□□□ -0.59
PCDHGA1-202ENST00000517417 MYBL1P10243 752 aa11.37□□□□□ -0.59
PCDHGA1-202ENST00000517417 MAGEA4P43358 317 aa11.37□□□□□ -0.59
PCDHGA1-202ENST00000517417 PID1Q7Z2X4 250 aa11.37□□□□□ -0.59
PCDHGA1-202ENST00000517417 KDELC2Q7Z4H8 507 aa11.37□□□□□ -0.59
PCDHGA1-202ENST00000517417 CRLF3Q8IUI8 442 aa11.37□□□□□ -0.59
PCDHGA1-202ENST00000517417 TMEM59LQ9UK28 342 aa11.37□□□□□ -0.59
PCDHGA1-202ENST00000517417 CCDC195A0A1B0GUA6 201 aa11.37□□□□□ -0.59
PCDHGA1-202ENST00000517417 C6orf222P0C671 652 aaPredicted RBP11.37□□□□□ -0.59
PCDHGA1-202ENST00000517417 CAP2P40123 477 aa11.37□□□□□ -0.59
PCDHGA1-202ENST00000517417 TSPY1Q01534 308 aa11.37□□□□□ -0.59
PCDHGA1-202ENST00000517417 IL1RL1Q01638 556 aa11.37□□□□□ -0.59
PCDHGA1-202ENST00000517417 OCRLQ01968 901 aa11.37□□□□□ -0.59
PCDHGA1-202ENST00000517417 ATG16L1Q676U5 607 aa11.37□□□□□ -0.59
PCDHGA1-202ENST00000517417 TRIM67Q6ZTA4 783 aa11.37□□□□□ -0.59
PCDHGA1-202ENST00000517417 WDR75Q8IWA0 830 aaKnown RBP11.37□□□□□ -0.59
PCDHGA1-202ENST00000517417 CYP2W1Q8TAV3 490 aa11.37□□□□□ -0.59
PCDHGA1-202ENST00000517417 TLCD1Q96CP7 247 aa11.37□□□□□ -0.59
PCDHGA1-202ENST00000517417 ATXN7L3BQ96GX2 97 aa11.37□□□□□ -0.59
PCDHGA1-202ENST00000517417 MCEEQ96PE7 176 aa11.37□□□□□ -0.59
PCDHGA1-202ENST00000517417 CYTH2Q99418 400 aa11.37□□□□□ -0.59
PCDHGA1-202ENST00000517417 UNC45AQ9H3U1 944 aa11.37□□□□□ -0.59
PCDHGA1-202ENST00000517417 KCNMB3Q9NPA1 279 aa11.37□□□□□ -0.59
PCDHGA1-202ENST00000517417 SPDYE2BA6NHP3 402 aa11.37□□□□□ -0.59
PCDHGA1-202ENST00000517417 GOLGA8CPA6NN73 597 aa11.37□□□□□ -0.59
PCDHGA1-202ENST00000517417 FAM86B1E9PN63 330 aa11.37□□□□□ -0.59
PCDHGA1-202ENST00000517417 DDX3YO15523 660 aaKnown RBP11.37□□□□□ -0.59
PCDHGA1-202ENST00000517417 ZBTB24O43167 697 aaPredicted RBP11.37□□□□□ -0.59
PCDHGA1-202ENST00000517417 TTC4O95801 387 aa11.37□□□□□ -0.59
PCDHGA1-202ENST00000517417 S100BP04271 92 aaPredicted RBP11.37□□□□□ -0.59
PCDHGA1-202ENST00000517417 PAEPP09466 180 aa11.37□□□□□ -0.59
PCDHGA1-202ENST00000517417 FAM86B2P0C5J1 330 aa11.37□□□□□ -0.59
PCDHGA1-202ENST00000517417 SPDYE6P0CI01 402 aa11.37□□□□□ -0.59
PCDHGA1-202ENST00000517417 MXD4Q14582 209 aaPredicted RBP11.37□□□□□ -0.59
PCDHGA1-202ENST00000517417 POTEAQ6S8J7 498 aa11.37□□□□□ -0.59
PCDHGA1-202ENST00000517417 C6orf89Q6UWU4 347 aa11.37□□□□□ -0.59
PCDHGA1-202ENST00000517417 CRELD2Q6UXH1 353 aaPredicted RBP11.37□□□□□ -0.59
PCDHGA1-202ENST00000517417 ZNF720Q7Z2F6 126 aa11.37□□□□□ -0.59
PCDHGA1-202ENST00000517417 OR6J1Q8NGC5 347 aa11.37□□□□□ -0.59
PCDHGA1-202ENST00000517417 ZDHHC15Q96MV8 337 aa11.37□□□□□ -0.59
PCDHGA1-202ENST00000517417 POP1Q99575 1024 aaKnown RBP11.37□□□□□ -0.59
PCDHGA1-202ENST00000517417 SPON2Q9BUD6 331 aa11.37□□□□□ -0.59
PCDHGA1-202ENST00000517417 CYP26B1Q9NR63 512 aa11.37□□□□□ -0.59
PCDHGA1-202ENST00000517417 FAM49BQ9NUQ9 324 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms