RNA–Protein interactions for RNA: ENST00000515711.1

LMNA-224, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-224ENST00000515711 ZNF564Q8TBZ8 553 aaPredicted RBP12.72□□□□□ -0.37
LMNA-224ENST00000515711 RUBCNQ92622 972 aa12.72□□□□□ -0.37
LMNA-224ENST00000515711 HES6Q96HZ4 224 aa12.72□□□□□ -0.37
LMNA-224ENST00000515711 RPS6KC1Q96S38 1066 aa12.72□□□□□ -0.37
LMNA-224ENST00000515711 NUP85Q9BW27 656 aa12.72□□□□□ -0.37
LMNA-224ENST00000515711 RNF208Q9H0X6 261 aa12.72□□□□□ -0.37
LMNA-224ENST00000515711 MRPL47Q9HD33 250 aaKnown RBP12.72□□□□□ -0.37
LMNA-224ENST00000515711 OSGEPQ9NPF4 335 aa12.72□□□□□ -0.37
LMNA-224ENST00000515711 SLC38A7Q9NVC3 462 aa12.72□□□□□ -0.37
LMNA-224ENST00000515711 CNOT8Q9UFF9 292 aaKnown RBP12.72□□□□□ -0.37
LMNA-224ENST00000515711 KIAA1257Q9ULG3 409 aa12.72□□□□□ -0.37
LMNA-224ENST00000515711 POLIQ9UNA4 740 aa12.72□□□□□ -0.37
LMNA-224ENST00000515711 IPPQ9Y573 584 aa12.72□□□□□ -0.37
LMNA-224ENST00000515711 A0A0U1RQG5 324 aaPredicted RBP12.71□□□□□ -0.37
LMNA-224ENST00000515711 NCK2O43639 380 aa12.71□□□□□ -0.37
LMNA-224ENST00000515711 SRGAP2O75044 1071 aa12.71□□□□□ -0.37
LMNA-224ENST00000515711 CILPO75339 1184 aa12.71□□□□□ -0.37
LMNA-224ENST00000515711 MYCNP04198 464 aaPredicted RBP12.71□□□□□ -0.37
LMNA-224ENST00000515711 WEE2P0C1S8 567 aa12.71□□□□□ -0.37
LMNA-224ENST00000515711 ZSCAN20P17040 1043 aaPredicted RBP12.71□□□□□ -0.37
LMNA-224ENST00000515711 MCM3P25205 808 aa12.71□□□□□ -0.37
LMNA-224ENST00000515711 BMP8BP34820 402 aa12.71□□□□□ -0.37
LMNA-224ENST00000515711 THPOP40225 353 aa12.71□□□□□ -0.37
LMNA-224ENST00000515711 LRIT3Q3SXY7 679 aa12.71□□□□□ -0.37
LMNA-224ENST00000515711 CREG2Q8IUH2 290 aa12.71□□□□□ -0.37
LMNA-224ENST00000515711 UBL4BQ8N7F7 174 aa12.71□□□□□ -0.37
LMNA-224ENST00000515711 CAPZA3Q96KX2 299 aa12.71□□□□□ -0.37
LMNA-224ENST00000515711 FAM161BQ96MY7 647 aa12.71□□□□□ -0.37
LMNA-224ENST00000515711 TRAIPQ9BWF2 469 aa12.71□□□□□ -0.37
LMNA-224ENST00000515711 WNT8AQ9H1J5 351 aa12.71□□□□□ -0.37
LMNA-224ENST00000515711 LHX5Q9H2C1 402 aa12.71□□□□□ -0.37
LMNA-224ENST00000515711 SMYD3Q9H7B4 428 aa12.71□□□□□ -0.37
LMNA-224ENST00000515711 ERVK-5Q9HDB9 667 aa12.71□□□□□ -0.37
LMNA-224ENST00000515711 PARP2Q9UGN5 583 aa12.71□□□□□ -0.37
LMNA-224ENST00000515711 STRIP2Q9ULQ0 834 aa12.71□□□□□ -0.37
LMNA-224ENST00000515711 BARX2Q9UMQ3 279 aaPredicted RBP12.71□□□□□ -0.37
LMNA-224ENST00000515711 TANC1Q9C0D5 1861 aa12.71□□□□□ -0.37
LMNA-224ENST00000515711 GRIN2DO15399 1336 aa12.7□□□□□ -0.38
LMNA-224ENST00000515711 SMIM28A0A1B0GU29 152 aa12.7□□□□□ -0.38
LMNA-224ENST00000515711 KBTBD13C9JR72 458 aa12.7□□□□□ -0.38
LMNA-224ENST00000515711 CHRNA1P02708 482 aa12.7□□□□□ -0.38
LMNA-224ENST00000515711 CTSHP09668 335 aa12.7□□□□□ -0.38
LMNA-224ENST00000515711 VDRP11473 427 aa12.7□□□□□ -0.38
LMNA-224ENST00000515711 ITGA4P13612 1032 aa12.7□□□□□ -0.38
LMNA-224ENST00000515711 SLC1A1P43005 524 aa12.7□□□□□ -0.38
LMNA-224ENST00000515711 TAP1Q03518 808 aa12.7□□□□□ -0.38
LMNA-224ENST00000515711 PAK2Q13177 524 aa12.7□□□□□ -0.38
LMNA-224ENST00000515711 SV2CQ496J9 727 aa12.7□□□□□ -0.38
LMNA-224ENST00000515711 FBXO47Q5MNV8 452 aa12.7□□□□□ -0.38
LMNA-224ENST00000515711 C9orf57Q5W0N0 161 aa12.7□□□□□ -0.38
LMNA-224ENST00000515711 DNAAF5Q86Y56 855 aa12.7□□□□□ -0.38
LMNA-224ENST00000515711 C7orf61Q8IZ16 206 aa12.7□□□□□ -0.38
LMNA-224ENST00000515711 SMG8Q8ND04 991 aaKnown RBP12.7□□□□□ -0.38
LMNA-224ENST00000515711 COG1Q8WTW3 980 aa12.7□□□□□ -0.38
LMNA-224ENST00000515711 FAM122AQ96E09 287 aa12.7□□□□□ -0.38
LMNA-224ENST00000515711 CYFIP2Q96F07 1278 aa12.7□□□□□ -0.38
LMNA-224ENST00000515711 TMEM176AQ96HP8 235 aa12.7□□□□□ -0.38
LMNA-224ENST00000515711 ZMAT2Q96NC0 199 aaKnown RBP12.7□□□□□ -0.38
LMNA-224ENST00000515711 MMS19Q96T76 1030 aa12.7□□□□□ -0.38
LMNA-224ENST00000515711 NAP1L3Q99457 506 aaPredicted RBP12.7□□□□□ -0.38
LMNA-224ENST00000515711 APOL6Q9BWW8 343 aa12.7□□□□□ -0.38
LMNA-224ENST00000515711 MIS12Q9H081 205 aa12.7□□□□□ -0.38
LMNA-224ENST00000515711 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.7□□□□□ -0.38
LMNA-224ENST00000515711 CARD9Q9H257 536 aa12.7□□□□□ -0.38
LMNA-224ENST00000515711 FAM105AQ9NUU6 356 aa12.7□□□□□ -0.38
LMNA-224ENST00000515711 ADAM22Q9P0K1 906 aa12.7□□□□□ -0.38
LMNA-224ENST00000515711 TUBGCP4Q9UGJ1 667 aa12.7□□□□□ -0.38
LMNA-224ENST00000515711 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.7□□□□□ -0.38
LMNA-224ENST00000515711 ST3GAL5Q9UNP4 418 aa12.7□□□□□ -0.38
LMNA-224ENST00000515711 COG5Q9UP83 839 aa12.7□□□□□ -0.38
LMNA-224ENST00000515711 GIT1Q9Y2X7 761 aa12.7□□□□□ -0.38
LMNA-224ENST00000515711 HES2Q9Y543 173 aa12.7□□□□□ -0.38
LMNA-224ENST00000515711 V9GYY5 206 aaPredicted RBP12.7□□□□□ -0.38
LMNA-224ENST00000515711 A0A1W2PQ45 241 aaPredicted RBP12.69□□□□□ -0.38
LMNA-224ENST00000515711 A0A1W2PQY0 241 aa12.69□□□□□ -0.38
LMNA-224ENST00000515711 PGRMC1O00264 195 aaKnown RBP12.69□□□□□ -0.38
LMNA-224ENST00000515711 KCNK3O14649 394 aa12.69□□□□□ -0.38
LMNA-224ENST00000515711 ZNF185O15231 689 aa12.69□□□□□ -0.38
LMNA-224ENST00000515711 FAM163BP0C2L3 166 aa12.69□□□□□ -0.38
LMNA-224ENST00000515711 CD19P15391 556 aa12.69□□□□□ -0.38
LMNA-224ENST00000515711 SYN1P17600 705 aa12.69□□□□□ -0.38
LMNA-224ENST00000515711 MMP8P22894 467 aa12.69□□□□□ -0.38
LMNA-224ENST00000515711 AKAP5P24588 427 aa12.69□□□□□ -0.38
LMNA-224ENST00000515711 BRD2P25440 801 aaKnown RBP12.69□□□□□ -0.38
LMNA-224ENST00000515711 CTNNA2P26232 953 aa12.69□□□□□ -0.38
LMNA-224ENST00000515711 LRPAP1P30533 357 aa12.69□□□□□ -0.38
LMNA-224ENST00000515711 RAP1GAPP47736 663 aa12.69□□□□□ -0.38
LMNA-224ENST00000515711 TAF6P49848 677 aa12.69□□□□□ -0.38
LMNA-224ENST00000515711 GUCY2FP51841 1108 aa12.69□□□□□ -0.38
LMNA-224ENST00000515711 RAD23BP54727 409 aa12.69□□□□□ -0.38
LMNA-224ENST00000515711 GSCP56915 257 aaPredicted RBP12.69□□□□□ -0.38
LMNA-224ENST00000515711 NFX1Q12986 1120 aaKnown RBP12.69□□□□□ -0.38
LMNA-224ENST00000515711 TRIM71Q2Q1W2 868 aaKnown RBP12.69□□□□□ -0.38
LMNA-224ENST00000515711 LHX8Q68G74 356 aa12.69□□□□□ -0.38
LMNA-224ENST00000515711 UNC93AQ86WB7 457 aa12.69□□□□□ -0.38
LMNA-224ENST00000515711 PASD1Q8IV76 773 aa12.69□□□□□ -0.38
LMNA-224ENST00000515711 TDHQ8IZJ6 230 aa12.69□□□□□ -0.38
LMNA-224ENST00000515711 MMGT1Q8N4V1 131 aa12.69□□□□□ -0.38
LMNA-224ENST00000515711 SLC43A3Q8NBI5 491 aa12.69□□□□□ -0.38
LMNA-224ENST00000515711 ACTRT1Q8TDG2 376 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms