RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, human

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLDND1-231	ENST00000515620	CDC45	O75419	566 aa		11.45	□□□□□ -0.58
CLDND1-231	ENST00000515620	MED24	O75448	989 aa		11.45	□□□□□ -0.58
CLDND1-231	ENST00000515620	HARS	P12081	509 aa	Known RBP	11.45	□□□□□ -0.58
CLDND1-231	ENST00000515620	ARSA	P15289	507 aa		11.45	□□□□□ -0.58
CLDND1-231	ENST00000515620	MAPK8	P45983	427 aa		11.45	□□□□□ -0.58
CLDND1-231	ENST00000515620	SIM1	P81133	766 aa	Predicted RBP	11.45	□□□□□ -0.58
CLDND1-231	ENST00000515620	RUNX3	Q13761	415 aa		11.45	□□□□□ -0.58
CLDND1-231	ENST00000515620	SYT13	Q7L8C5	426 aa		11.45	□□□□□ -0.58
CLDND1-231	ENST00000515620	PDZD3	Q86UT5	571 aa		11.45	□□□□□ -0.58
CLDND1-231	ENST00000515620	SKAP1	Q86WV1	359 aa		11.45	□□□□□ -0.58
CLDND1-231	ENST00000515620	PROSER1	Q86XN7	944 aa		11.45	□□□□□ -0.58
CLDND1-231	ENST00000515620	CATSPER3	Q86XQ3	398 aa		11.45	□□□□□ -0.58
CLDND1-231	ENST00000515620	PIP4P2	Q8N4L2	257 aa		11.45	□□□□□ -0.58
CLDND1-231	ENST00000515620	ATAD1	Q8NBU5	361 aa		11.45	□□□□□ -0.58
CLDND1-231	ENST00000515620	ACD	Q96AP0	544 aa		11.45	□□□□□ -0.58
CLDND1-231	ENST00000515620	ACAP3	Q96P50	834 aa		11.45	□□□□□ -0.58
CLDND1-231	ENST00000515620	GCNA	Q96QF7	691 aa		11.45	□□□□□ -0.58
CLDND1-231	ENST00000515620	NACC1	Q96RE7	527 aa		11.45	□□□□□ -0.58
CLDND1-231	ENST00000515620	LPIN3	Q9BQK8	851 aa		11.45	□□□□□ -0.58
CLDND1-231	ENST00000515620	FAM83C	Q9BQN1	747 aa		11.45	□□□□□ -0.58
CLDND1-231	ENST00000515620	TUFT1	Q9NNX1	390 aa		11.45	□□□□□ -0.58
CLDND1-231	ENST00000515620	EBF1	Q9UH73	591 aa		11.45	□□□□□ -0.58
CLDND1-231	ENST00000515620	ASB3	Q9Y575	518 aa		11.45	□□□□□ -0.58
CLDND1-231	ENST00000515620	IGSF10	Q6WRI0	2623 aa		11.45	□□□□□ -0.58
CLDND1-231	ENST00000515620	PHLPP2	Q6ZVD8	1323 aa		11.44	□□□□□ -0.58
CLDND1-231	ENST00000515620		K7ERI5	159 aa		11.44	□□□□□ -0.58
CLDND1-231	ENST00000515620	WNT7A	O00755	349 aa		11.44	□□□□□ -0.58
CLDND1-231	ENST00000515620	OAZ2	O95190	189 aa		11.44	□□□□□ -0.58
CLDND1-231	ENST00000515620	SEC24B	O95487	1268 aa		11.44	□□□□□ -0.58
CLDND1-231	ENST00000515620	DRD1	P21728	446 aa		11.44	□□□□□ -0.58
CLDND1-231	ENST00000515620	BCKDHB	P21953	392 aa		11.44	□□□□□ -0.58
CLDND1-231	ENST00000515620	WEE1	P30291	646 aa		11.44	□□□□□ -0.58
CLDND1-231	ENST00000515620	DHPS	P49366	369 aa	Predicted RBP	11.44	□□□□□ -0.58
CLDND1-231	ENST00000515620	CDR1	P51861	262 aa		11.44	□□□□□ -0.58
CLDND1-231	ENST00000515620	PSMD2	Q13200	908 aa		11.44	□□□□□ -0.58
CLDND1-231	ENST00000515620	GPR17	Q13304	367 aa		11.44	□□□□□ -0.58
CLDND1-231	ENST00000515620	COL28A1	Q2UY09	1125 aa		11.44	□□□□□ -0.58
CLDND1-231	ENST00000515620	USP39	Q53GS9	565 aa	Known RBP	11.44	□□□□□ -0.58
CLDND1-231	ENST00000515620	CENPP	Q6IPU0	288 aa		11.44	□□□□□ -0.58
CLDND1-231	ENST00000515620	USP37	Q86T82	979 aa		11.44	□□□□□ -0.58
CLDND1-231	ENST00000515620	ITIH5	Q86UX2	942 aa		11.44	□□□□□ -0.58
CLDND1-231	ENST00000515620	C11orf74	Q86VG3	221 aa		11.44	□□□□□ -0.58
CLDND1-231	ENST00000515620	CMTM8	Q8IZV2	173 aa		11.44	□□□□□ -0.58
CLDND1-231	ENST00000515620	TSTD1	Q8NFU3	115 aa		11.44	□□□□□ -0.58
CLDND1-231	ENST00000515620	PIGK	Q92643	395 aa		11.44	□□□□□ -0.58
CLDND1-231	ENST00000515620	ZNF274	Q96GC6	653 aa	Predicted RBP	11.44	□□□□□ -0.58
CLDND1-231	ENST00000515620	ACO2	Q99798	780 aa	Known RBP	11.44	□□□□□ -0.58
CLDND1-231	ENST00000515620	P2RY13	Q9BPV8	354 aa		11.44	□□□□□ -0.58
CLDND1-231	ENST00000515620	PTPRH	Q9HD43	1115 aa		11.44	□□□□□ -0.58
CLDND1-231	ENST00000515620	DAXX	Q9UER7	740 aa	Predicted RBP	11.44	□□□□□ -0.58
CLDND1-231	ENST00000515620	CCL26	Q9Y258	94 aa		11.44	□□□□□ -0.58
CLDND1-231	ENST00000515620	NUP205	Q92621	2012 aa		11.43	□□□□□ -0.58
CLDND1-231	ENST00000515620	ADAMTS20	P59510	1910 aa		11.43	□□□□□ -0.58
CLDND1-231	ENST00000515620	OR6C75	A6NL08	312 aa		11.43	□□□□□ -0.58
CLDND1-231	ENST00000515620		M0QZQ0	153 aa		11.43	□□□□□ -0.58
CLDND1-231	ENST00000515620	CDKL5	O76039	1030 aa		11.43	□□□□□ -0.58
CLDND1-231	ENST00000515620	LARGE1	O95461	756 aa		11.43	□□□□□ -0.58
CLDND1-231	ENST00000515620	MCF2	P10911	925 aa		11.43	□□□□□ -0.58
CLDND1-231	ENST00000515620	CDC25C	P30307	473 aa		11.43	□□□□□ -0.58
CLDND1-231	ENST00000515620	KRT2	P35908	639 aa		11.43	□□□□□ -0.58
CLDND1-231	ENST00000515620	GALK1	P51570	392 aa		11.43	□□□□□ -0.58
CLDND1-231	ENST00000515620	AMPD2	Q01433	879 aa		11.43	□□□□□ -0.58
CLDND1-231	ENST00000515620	LMAN2	Q12907	356 aa		11.43	□□□□□ -0.58
CLDND1-231	ENST00000515620	BFSP1	Q12934	665 aa		11.43	□□□□□ -0.58
CLDND1-231	ENST00000515620	VEPH1	Q14D04	833 aa		11.43	□□□□□ -0.58
CLDND1-231	ENST00000515620	FBXO43	Q4G163	708 aa		11.43	□□□□□ -0.58
CLDND1-231	ENST00000515620	TRIM61	Q5EBN2	209 aa		11.43	□□□□□ -0.58
CLDND1-231	ENST00000515620	ANO7	Q6IWH7	933 aa		11.43	□□□□□ -0.58
CLDND1-231	ENST00000515620	RUFY3	Q7L099	469 aa		11.43	□□□□□ -0.58
CLDND1-231	ENST00000515620	EZH1	Q92800	747 aa	Predicted RBP	11.43	□□□□□ -0.58
CLDND1-231	ENST00000515620	KIFAP3	Q92845	792 aa		11.43	□□□□□ -0.58
CLDND1-231	ENST00000515620	MTMR9	Q96QG7	549 aa		11.43	□□□□□ -0.58
CLDND1-231	ENST00000515620	SEPT5	Q99719	369 aa	Predicted RBP	11.43	□□□□□ -0.58
CLDND1-231	ENST00000515620	TCHP	Q9BT92	498 aa		11.43	□□□□□ -0.58
CLDND1-231	ENST00000515620	TARS2	Q9BW92	718 aa	Known RBP	11.43	□□□□□ -0.58
CLDND1-231	ENST00000515620	SLC46A2	Q9BY10	475 aa		11.43	□□□□□ -0.58
CLDND1-231	ENST00000515620	OXCT2	Q9BYC2	517 aa	Predicted RBP	11.43	□□□□□ -0.58
CLDND1-231	ENST00000515620	MRPL4	Q9BYD3	311 aa	Known RBP	11.43	□□□□□ -0.58
CLDND1-231	ENST00000515620	IL21	Q9HBE4	155 aa		11.43	□□□□□ -0.58
CLDND1-231	ENST00000515620	EVL	Q9UI08	416 aa	Predicted RBP	11.43	□□□□□ -0.58
CLDND1-231	ENST00000515620	ATG2B	Q96BY7	2078 aa		11.43	□□□□□ -0.58
CLDND1-231	ENST00000515620	CACNA1E	Q15878	2313 aa		11.43	□□□□□ -0.58
CLDND1-231	ENST00000515620	FREM2	Q5SZK8	3169 aa		11.42	□□□□□ -0.58
CLDND1-231	ENST00000515620	STK36	Q9NRP7	1315 aa		11.42	□□□□□ -0.58
CLDND1-231	ENST00000515620	CCDC169	A6NNP5	214 aa		11.42	□□□□□ -0.58
CLDND1-231	ENST00000515620	ENG	P17813	658 aa		11.42	□□□□□ -0.58
CLDND1-231	ENST00000515620	NMT1	P30419	496 aa	Known RBP	11.42	□□□□□ -0.58
CLDND1-231	ENST00000515620	AVPR1A	P37288	418 aa		11.42	□□□□□ -0.58
CLDND1-231	ENST00000515620	IRX6	P78412	446 aa	Predicted RBP	11.42	□□□□□ -0.58
CLDND1-231	ENST00000515620	SPAG1	Q07617	926 aa		11.42	□□□□□ -0.58
CLDND1-231	ENST00000515620	TAF12	Q16514	161 aa		11.42	□□□□□ -0.58
CLDND1-231	ENST00000515620	SEZ6	Q53EL9	994 aa		11.42	□□□□□ -0.58
CLDND1-231	ENST00000515620	OVOS1	Q6IE37	1185 aa		11.42	□□□□□ -0.58
CLDND1-231	ENST00000515620	CC2D1A	Q6P1N0	951 aa	Predicted RBP	11.42	□□□□□ -0.58
CLDND1-231	ENST00000515620	MPZL3	Q6UWV2	235 aa		11.42	□□□□□ -0.58
CLDND1-231	ENST00000515620	DSTYK	Q6XUX3	929 aa		11.42	□□□□□ -0.58
CLDND1-231	ENST00000515620	ARMCX6	Q7L4S7	300 aa		11.42	□□□□□ -0.58
CLDND1-231	ENST00000515620	TTC30A	Q86WT1	665 aa		11.42	□□□□□ -0.58
CLDND1-231	ENST00000515620	CHCHD4	Q8N4Q1	142 aa		11.42	□□□□□ -0.58
CLDND1-231	ENST00000515620	MAB21L3	Q8N8X9	362 aa		11.42	□□□□□ -0.58

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