RNA–Protein interactions for RNA: ENST00000515594.5

PHF3-212, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 3,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-212ENST00000515594 SETDB1Q15047 1291 aa13.63□□□□□ -0.23
PHF3-212ENST00000515594 NBPF20Q3BBV1 942 aa13.63□□□□□ -0.23
PHF3-212ENST00000515594 FNBP1LQ5T0N5 605 aa13.63□□□□□ -0.23
PHF3-212ENST00000515594 NLGN1Q8N2Q7 840 aa13.63□□□□□ -0.23
PHF3-212ENST00000515594 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.63□□□□□ -0.23
PHF3-212ENST00000515594 SLITRK1Q96PX8 696 aa13.63□□□□□ -0.23
PHF3-212ENST00000515594 NUDCD1Q96RS6 583 aa13.63□□□□□ -0.23
PHF3-212ENST00000515594 SMC6Q96SB8 1091 aa13.63□□□□□ -0.23
PHF3-212ENST00000515594 MIPEPQ99797 713 aa13.63□□□□□ -0.23
PHF3-212ENST00000515594 PDCD2LQ9BRP1 358 aa13.63□□□□□ -0.23
PHF3-212ENST00000515594 POLR3FQ9H1D9 316 aaPredicted RBP13.63□□□□□ -0.23
PHF3-212ENST00000515594 DENND2DQ9H6A0 471 aaPredicted RBP13.63□□□□□ -0.23
PHF3-212ENST00000515594 FEM1BQ9UK73 627 aa13.63□□□□□ -0.23
PHF3-212ENST00000515594 EXOC7Q9UPT5 735 aa13.63□□□□□ -0.23
PHF3-212ENST00000515594 CLUHO75153 1309 aa13.63□□□□□ -0.23
PHF3-212ENST00000515594 DNALI1O14645 258 aaPredicted RBP13.62□□□□□ -0.23
PHF3-212ENST00000515594 EDF1O60869 148 aaKnown RBP13.62□□□□□ -0.23
PHF3-212ENST00000515594 MAP3K6O95382 1288 aa13.62□□□□□ -0.23
PHF3-212ENST00000515594 SPARCL1Q14515 664 aa13.62□□□□□ -0.23
PHF3-212ENST00000515594 WDR44Q5JSH3 913 aa13.62□□□□□ -0.23
PHF3-212ENST00000515594 HHATQ5VTY9 493 aa13.62□□□□□ -0.23
PHF3-212ENST00000515594 ARHGEF16Q5VV41 709 aa13.62□□□□□ -0.23
PHF3-212ENST00000515594 C10orf82Q8WW14 230 aa13.62□□□□□ -0.23
PHF3-212ENST00000515594 FBXL18Q96ME1 805 aa13.62□□□□□ -0.23
PHF3-212ENST00000515594 TARS2Q9BW92 718 aaKnown RBP13.62□□□□□ -0.23
PHF3-212ENST00000515594 KANSL3Q9P2N6 904 aa13.62□□□□□ -0.23
PHF3-212ENST00000515594 CST3P01034 146 aaPredicted RBP13.62□□□□□ -0.23
PHF3-212ENST00000515594 GTF2H1P32780 548 aa13.62□□□□□ -0.23
PHF3-212ENST00000515594 CPA2P48052 419 aa13.62□□□□□ -0.23
PHF3-212ENST00000515594 PTP4A2Q12974 167 aa13.62□□□□□ -0.23
PHF3-212ENST00000515594 BAATQ14032 418 aaPredicted RBP13.62□□□□□ -0.23
PHF3-212ENST00000515594 TTC7BQ86TV6 843 aa13.62□□□□□ -0.23
PHF3-212ENST00000515594 LRRC6Q86X45 466 aa13.62□□□□□ -0.23
PHF3-212ENST00000515594 MAB21L3Q8N8X9 362 aa13.62□□□□□ -0.23
PHF3-212ENST00000515594 AVENQ9NQS1 362 aaPredicted RBP13.62□□□□□ -0.23
PHF3-212ENST00000515594 ZNF277Q9NRM2 450 aaPredicted RBP13.62□□□□□ -0.23
PHF3-212ENST00000515594 ZNF646O15015 1829 aaPredicted RBP13.62□□□□□ -0.23
PHF3-212ENST00000515594 ZBED4O75132 1171 aa13.62□□□□□ -0.23
PHF3-212ENST00000515594 EGFRP00533 1210 aa13.62□□□□□ -0.23
PHF3-212ENST00000515594 GLRA2P23416 452 aa13.62□□□□□ -0.23
PHF3-212ENST00000515594 TNFSF9P41273 254 aa13.62□□□□□ -0.23
PHF3-212ENST00000515594 CUL2Q13617 745 aa13.62□□□□□ -0.23
PHF3-212ENST00000515594 TAF5Q15542 800 aa13.62□□□□□ -0.23
PHF3-212ENST00000515594 ZACNQ401N2 412 aa13.62□□□□□ -0.23
PHF3-212ENST00000515594 DSTYKQ6XUX3 929 aa13.62□□□□□ -0.23
PHF3-212ENST00000515594 CDR2LQ86X02 465 aaPredicted RBP13.62□□□□□ -0.23
PHF3-212ENST00000515594 ABRAQ8N0Z2 381 aa13.62□□□□□ -0.23
PHF3-212ENST00000515594 CCHCR1Q8TD31 782 aa13.62□□□□□ -0.23
PHF3-212ENST00000515594 ZNF75CPQ92670 426 aaPredicted RBP13.62□□□□□ -0.23
PHF3-212ENST00000515594 VTI1AQ96AJ9 217 aa13.62□□□□□ -0.23
PHF3-212ENST00000515594 ST6GALNAC4Q9H4F1 302 aa13.62□□□□□ -0.23
PHF3-212ENST00000515594 CFAP69A5D8W1 941 aa13.61□□□□□ -0.23
PHF3-212ENST00000515594 LRRIQ4A6NIV6 560 aa13.61□□□□□ -0.23
PHF3-212ENST00000515594 H0YIN7 160 aa13.61□□□□□ -0.23
PHF3-212ENST00000515594 KIF1CO43896 1103 aaKnown RBP13.61□□□□□ -0.23
PHF3-212ENST00000515594 TCEA3O75764 348 aa13.61□□□□□ -0.23
PHF3-212ENST00000515594 SLC1A1P43005 524 aa13.61□□□□□ -0.23
PHF3-212ENST00000515594 MDH1BQ5I0G3 518 aa13.61□□□□□ -0.23
PHF3-212ENST00000515594 NLRP9Q7RTR0 991 aa13.61□□□□□ -0.23
PHF3-212ENST00000515594 FAM160B2Q86V87 743 aa13.61□□□□□ -0.23
PHF3-212ENST00000515594 CCDC125Q86Z20 511 aa13.61□□□□□ -0.23
PHF3-212ENST00000515594 RHPN2Q8IUC4 686 aa13.61□□□□□ -0.23
PHF3-212ENST00000515594 KATNAL2Q8IYT4 538 aa13.61□□□□□ -0.23
PHF3-212ENST00000515594 EMC1Q8N766 993 aa13.61□□□□□ -0.23
PHF3-212ENST00000515594 DTX3LQ8TDB6 740 aa13.61□□□□□ -0.23
PHF3-212ENST00000515594 TMC2Q8TDI7 906 aa13.61□□□□□ -0.23
PHF3-212ENST00000515594 FAM151AQ8WW52 585 aa13.61□□□□□ -0.23
PHF3-212ENST00000515594 NAF1Q96HR8 494 aaKnown RBP13.61□□□□□ -0.23
PHF3-212ENST00000515594 CFAP57Q96MR6 1250 aa13.61□□□□□ -0.23
PHF3-212ENST00000515594 MRIQ9BWK5 157 aa13.61□□□□□ -0.23
PHF3-212ENST00000515594 USH1CQ9Y6N9 552 aa13.61□□□□□ -0.23
PHF3-212ENST00000515594 LTBP4Q8N2S1 1624 aa13.61□□□□□ -0.23
PHF3-212ENST00000515594 PIK3R2O00459 728 aa13.61□□□□□ -0.23
PHF3-212ENST00000515594 C4BPAP04003 597 aaKnown RBP13.61□□□□□ -0.23
PHF3-212ENST00000515594 WEE2P0C1S8 567 aa13.61□□□□□ -0.23
PHF3-212ENST00000515594 TPBGLP0DKB5 382 aa13.61□□□□□ -0.23
PHF3-212ENST00000515594 GCLCP48506 637 aaPredicted RBP13.61□□□□□ -0.23
PHF3-212ENST00000515594 C15orf39Q6ZRI6 1047 aa13.61□□□□□ -0.23
PHF3-212ENST00000515594 APBB1IPQ7Z5R6 666 aaPredicted RBP13.61□□□□□ -0.23
PHF3-212ENST00000515594 ZBTB33Q86T24 672 aa13.61□□□□□ -0.23
PHF3-212ENST00000515594 OGFOD1Q8N543 542 aa13.61□□□□□ -0.23
PHF3-212ENST00000515594 FEZF2Q8TBJ5 459 aa13.61□□□□□ -0.23
PHF3-212ENST00000515594 TCP10LQ8TDR4 215 aa13.61□□□□□ -0.23
PHF3-212ENST00000515594 OSBPL1AQ9BXW6 950 aa13.61□□□□□ -0.23
PHF3-212ENST00000515594 PXMP2Q9NR77 195 aa13.61□□□□□ -0.23
PHF3-212ENST00000515594 RBAKQ9NYW8 714 aaPredicted RBP13.61□□□□□ -0.23
PHF3-212ENST00000515594 FBXO40Q9UH90 709 aa13.61□□□□□ -0.23
PHF3-212ENST00000515594 MAPK13O15264 365 aa13.6□□□□□ -0.23
PHF3-212ENST00000515594 PSTPIP1O43586 416 aa13.6□□□□□ -0.23
PHF3-212ENST00000515594 SMNDC1O75940 238 aaKnown RBP eCLIP13.6□□□□□ -0.23
PHF3-212ENST00000515594 RGS20O76081 388 aa13.6□□□□□ -0.23
PHF3-212ENST00000515594 MAN1A1P33908 653 aa13.6□□□□□ -0.23
PHF3-212ENST00000515594 YARSP54577 528 aaKnown RBP13.6□□□□□ -0.23
PHF3-212ENST00000515594 PRKCEQ02156 737 aa13.6□□□□□ -0.23
PHF3-212ENST00000515594 CAV1Q03135 178 aa13.6□□□□□ -0.23
PHF3-212ENST00000515594 PDK4Q16654 411 aa13.6□□□□□ -0.23
PHF3-212ENST00000515594 BBS9Q3SYG4 887 aa13.6□□□□□ -0.23
PHF3-212ENST00000515594 KHDC1Q4VXA5 237 aaKnown RBP13.6□□□□□ -0.23
PHF3-212ENST00000515594 RNASEH2BQ5TBB1 312 aaKnown RBP13.6□□□□□ -0.23
PHF3-212ENST00000515594 LIN9Q5TKA1 542 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms