RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 LRRC8DQ7L1W4 858 aa9.74□□□□□ -0.85
CPNE4-213ENST00000515418 ACOT1Q86TX2 421 aa9.74□□□□□ -0.85
CPNE4-213ENST00000515418 CPNE8Q86YQ8 564 aa9.74□□□□□ -0.85
CPNE4-213ENST00000515418 LRRC52Q8N7C0 313 aa9.74□□□□□ -0.85
CPNE4-213ENST00000515418 DIS3LQ8TF46 1054 aaKnown RBP9.74□□□□□ -0.85
CPNE4-213ENST00000515418 C11orf70Q9BRQ4 267 aa9.74□□□□□ -0.85
CPNE4-213ENST00000515418 TRIM7Q9C029 511 aa9.74□□□□□ -0.85
CPNE4-213ENST00000515418 TSPYL2Q9H2G4 693 aaPredicted RBP9.74□□□□□ -0.85
CPNE4-213ENST00000515418 SMARCAL1Q9NZC9 954 aa9.74□□□□□ -0.85
CPNE4-213ENST00000515418 EHD2Q9NZN4 543 aa9.74□□□□□ -0.85
CPNE4-213ENST00000515418 PCDH10Q9P2E7 1040 aa9.74□□□□□ -0.85
CPNE4-213ENST00000515418 CNOT8Q9UFF9 292 aaKnown RBP9.74□□□□□ -0.85
CPNE4-213ENST00000515418 BARX2Q9UMQ3 279 aaPredicted RBP9.74□□□□□ -0.85
CPNE4-213ENST00000515418 SNX12Q9UMY4 172 aa9.74□□□□□ -0.85
CPNE4-213ENST00000515418 INPP5FQ9Y2H2 1132 aa9.74□□□□□ -0.85
CPNE4-213ENST00000515418 NCANO14594 1321 aa9.74□□□□□ -0.85
CPNE4-213ENST00000515418 SCN5AQ14524 2016 aa9.74□□□□□ -0.85
CPNE4-213ENST00000515418 CASTOR2A6NHX0 329 aa9.74□□□□□ -0.85
CPNE4-213ENST00000515418 PDE2AO00408 941 aaPredicted RBP9.74□□□□□ -0.85
CPNE4-213ENST00000515418 CTIFO43310 598 aaKnown RBP9.74□□□□□ -0.85
CPNE4-213ENST00000515418 CYP1A2P05177 515 aa9.74□□□□□ -0.85
CPNE4-213ENST00000515418 FGFR1P11362 822 aa9.74□□□□□ -0.85
CPNE4-213ENST00000515418 SELPP16109 830 aa9.74□□□□□ -0.85
CPNE4-213ENST00000515418 LMO2P25791 158 aa9.74□□□□□ -0.85
CPNE4-213ENST00000515418 GTF2F1P35269 517 aaKnown RBP eCLIP9.74□□□□□ -0.85
CPNE4-213ENST00000515418 CLCNKBP51801 687 aa9.74□□□□□ -0.85
CPNE4-213ENST00000515418 RNASE9P60153 205 aaKnown RBP9.74□□□□□ -0.85
CPNE4-213ENST00000515418 CENPCQ03188 943 aa9.74□□□□□ -0.85
CPNE4-213ENST00000515418 MESDQ14696 234 aa9.74□□□□□ -0.85
CPNE4-213ENST00000515418 MMS22LQ6ZRQ5 1243 aa9.74□□□□□ -0.85
CPNE4-213ENST00000515418 USP38Q8NB14 1042 aa9.74□□□□□ -0.85
CPNE4-213ENST00000515418 C1orf131Q8NDD1 294 aaKnown RBP9.74□□□□□ -0.85
CPNE4-213ENST00000515418 MNS1Q8NEH6 495 aa9.74□□□□□ -0.85
CPNE4-213ENST00000515418 OR6B3Q8NGW1 331 aa9.74□□□□□ -0.85
CPNE4-213ENST00000515418 UBA3Q8TBC4 463 aa9.74□□□□□ -0.85
CPNE4-213ENST00000515418 SCLYQ96I15 445 aa9.74□□□□□ -0.85
CPNE4-213ENST00000515418 MS4A14Q96JA4 679 aa9.74□□□□□ -0.85
CPNE4-213ENST00000515418 RPS6KC1Q96S38 1066 aa9.74□□□□□ -0.85
CPNE4-213ENST00000515418 NUP85Q9BW27 656 aa9.74□□□□□ -0.85
CPNE4-213ENST00000515418 ADAM22Q9P0K1 906 aa9.74□□□□□ -0.85
CPNE4-213ENST00000515418 CYTH4Q9UIA0 394 aa9.74□□□□□ -0.85
CPNE4-213ENST00000515418 GIT1Q9Y2X7 761 aa9.74□□□□□ -0.85
CPNE4-213ENST00000515418 XPOTO43592 962 aaKnown RBP9.73□□□□□ -0.85
CPNE4-213ENST00000515418 CAND2O75155 1236 aa9.73□□□□□ -0.85
CPNE4-213ENST00000515418 PAEPP09466 180 aa9.73□□□□□ -0.85
CPNE4-213ENST00000515418 CYP3A5P20815 502 aa9.73□□□□□ -0.85
CPNE4-213ENST00000515418 TAF6P49848 677 aa9.73□□□□□ -0.85
CPNE4-213ENST00000515418 LBX1P52954 281 aa9.73□□□□□ -0.85
CPNE4-213ENST00000515418 INCA1Q0VD86 236 aa9.73□□□□□ -0.85
CPNE4-213ENST00000515418 IFI16Q16666 785 aaKnown RBP9.73□□□□□ -0.85
CPNE4-213ENST00000515418 TCTN1Q2MV58 587 aa9.73□□□□□ -0.85
CPNE4-213ENST00000515418 ERCC6LQ2NKX8 1250 aa9.73□□□□□ -0.85
CPNE4-213ENST00000515418 SLC39A5Q6ZMH5 540 aa9.73□□□□□ -0.85
CPNE4-213ENST00000515418 MON1BQ7L1V2 547 aa9.73□□□□□ -0.85
CPNE4-213ENST00000515418 PEX26Q7Z412 305 aa9.73□□□□□ -0.85
CPNE4-213ENST00000515418 SLFN11Q7Z7L1 901 aa9.73□□□□□ -0.85
CPNE4-213ENST00000515418 NT5DC3Q86UY8 548 aa9.73□□□□□ -0.85
CPNE4-213ENST00000515418 ECHDC2Q86YB7 292 aa9.73□□□□□ -0.85
CPNE4-213ENST00000515418 RHOT2Q8IXI1 618 aa9.73□□□□□ -0.85
CPNE4-213ENST00000515418 HACE1Q8IYU2 909 aa9.73□□□□□ -0.85
CPNE4-213ENST00000515418 C3orf58Q8NDZ4 430 aa9.73□□□□□ -0.85
CPNE4-213ENST00000515418 KBTBD7Q8WVZ9 684 aa9.73□□□□□ -0.85
CPNE4-213ENST00000515418 LINC01599Q8WXQ3 324 aa9.73□□□□□ -0.85
CPNE4-213ENST00000515418 FAXDC2Q96IV6 333 aa9.73□□□□□ -0.85
CPNE4-213ENST00000515418 OSBPL9Q96SU4 736 aa9.73□□□□□ -0.85
CPNE4-213ENST00000515418 TRAIPQ9BWF2 469 aa9.73□□□□□ -0.85
CPNE4-213ENST00000515418 NT5C1AQ9BXI3 368 aa9.73□□□□□ -0.85
CPNE4-213ENST00000515418 EPC1Q9H2F5 836 aa9.73□□□□□ -0.85
CPNE4-213ENST00000515418 DPEP3Q9H4B8 488 aa9.73□□□□□ -0.85
CPNE4-213ENST00000515418 RSAD1Q9HA92 442 aa9.73□□□□□ -0.85
CPNE4-213ENST00000515418 RGS18Q9NS28 235 aa9.73□□□□□ -0.85
CPNE4-213ENST00000515418 TJP2Q9UDY2 1190 aa9.73□□□□□ -0.85
CPNE4-213ENST00000515418 L1RE1Q9UN81 338 aa9.73□□□□□ -0.85
CPNE4-213ENST00000515418 ALG6Q9Y672 507 aa9.73□□□□□ -0.85
CPNE4-213ENST00000515418 SQORQ9Y6N5 450 aa9.73□□□□□ -0.85
CPNE4-213ENST00000515418 TDRD15B5MCY1 1934 aaKnown RBP9.73□□□□□ -0.85
CPNE4-213ENST00000515418 C9IYK1 514 aa9.72□□□□□ -0.85
CPNE4-213ENST00000515418 LRPAP1P30533 357 aa9.72□□□□□ -0.85
CPNE4-213ENST00000515418 GNL1P36915 607 aaPredicted RBP9.72□□□□□ -0.85
CPNE4-213ENST00000515418 CCL23P55773 120 aa9.72□□□□□ -0.85
CPNE4-213ENST00000515418 TLE2Q04725 743 aa9.72□□□□□ -0.85
CPNE4-213ENST00000515418 PTP4A2Q12974 167 aa9.72□□□□□ -0.85
CPNE4-213ENST00000515418 PAN2Q504Q3 1202 aaKnown RBP9.72□□□□□ -0.85
CPNE4-213ENST00000515418 CYP4A22Q5TCH4 519 aa9.72□□□□□ -0.85
CPNE4-213ENST00000515418 ZNF598Q86UK7 904 aaKnown RBP9.72□□□□□ -0.85
CPNE4-213ENST00000515418 CREG2Q8IUH2 290 aa9.72□□□□□ -0.85
CPNE4-213ENST00000515418 DBF4BQ8NFT6 615 aa9.72□□□□□ -0.85
CPNE4-213ENST00000515418 ZNF564Q8TBZ8 553 aaPredicted RBP9.72□□□□□ -0.85
CPNE4-213ENST00000515418 CAGE1Q8TC20 777 aa9.72□□□□□ -0.85
CPNE4-213ENST00000515418 ZNF333Q96JL9 665 aa9.72□□□□□ -0.85
CPNE4-213ENST00000515418 FAM49BQ9NUQ9 324 aa9.72□□□□□ -0.85
CPNE4-213ENST00000515418 GTF3C4Q9UKN8 822 aa9.72□□□□□ -0.85
CPNE4-213ENST00000515418 PCDHGC3Q9UN70 934 aa9.72□□□□□ -0.85
CPNE4-213ENST00000515418 STXBP5LQ9Y2K9 1186 aa9.72□□□□□ -0.85
CPNE4-213ENST00000515418 TIMM13Q9Y5L4 95 aaPredicted RBP9.72□□□□□ -0.85
CPNE4-213ENST00000515418 ATP8B3O60423 1300 aa9.72□□□□□ -0.85
CPNE4-213ENST00000515418 A8MXQ7 604 aa9.72□□□□□ -0.85
CPNE4-213ENST00000515418 F8W810 466 aa9.72□□□□□ -0.85
CPNE4-213ENST00000515418 I3L4J1 428 aa9.72□□□□□ -0.85
CPNE4-213ENST00000515418 PIK3R2O00459 728 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms