RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 IQCEQ6IPM2 695 aa22.44■■□□□ 1.18
LSM6-207ENST00000515311 PDXDC1Q6P996 788 aa22.44■■□□□ 1.18
LSM6-207ENST00000515311 TAS1R1Q7RTX1 841 aa22.44■■□□□ 1.18
LSM6-207ENST00000515311 VPS52Q8N1B4 723 aa22.44■■□□□ 1.18
LSM6-207ENST00000515311 UBR7Q8N806 425 aa22.44■■□□□ 1.18
LSM6-207ENST00000515311 SPPL3Q8TCT6 385 aa22.44■■□□□ 1.18
LSM6-207ENST00000515311 KAT5Q92993 513 aa22.44■■□□□ 1.18
LSM6-207ENST00000515311 TTYH3Q9C0H2 523 aa22.44■■□□□ 1.18
LSM6-207ENST00000515311 CISHQ9NSE2 258 aa22.44■■□□□ 1.18
LSM6-207ENST00000515311 TRANK1O15050 2925 aa22.43■■□□□ 1.18
LSM6-207ENST00000515311 ADCY5O95622 1261 aa22.43■■□□□ 1.18
LSM6-207ENST00000515311 CDC25BP30305 580 aa22.43■■□□□ 1.18
LSM6-207ENST00000515311 GLUD2P49448 558 aa22.43■■□□□ 1.18
LSM6-207ENST00000515311 CDH8P55286 799 aa22.43■■□□□ 1.18
LSM6-207ENST00000515311 POLR2FP61218 127 aaKnown RBP22.43■■□□□ 1.18
LSM6-207ENST00000515311 DSG1Q02413 1049 aa22.43■■□□□ 1.18
LSM6-207ENST00000515311 MRPL58Q14197 206 aaKnown RBP22.43■■□□□ 1.18
LSM6-207ENST00000515311 RTP2Q5QGT7 225 aa22.43■■□□□ 1.18
LSM6-207ENST00000515311 VARS2Q5ST30 1063 aaKnown RBP22.43■■□□□ 1.18
LSM6-207ENST00000515311 KIAA1841Q6NSI8 718 aa22.43■■□□□ 1.18
LSM6-207ENST00000515311 ANKS3Q6ZW76 656 aa22.43■■□□□ 1.18
LSM6-207ENST00000515311 CEP57Q86XR8 500 aa22.43■■□□□ 1.18
LSM6-207ENST00000515311 PIK3R5Q8WYR1 880 aa22.43■■□□□ 1.18
LSM6-207ENST00000515311 SHC3Q92529 594 aa22.43■■□□□ 1.18
LSM6-207ENST00000515311 MRPL45Q9BRJ2 306 aaKnown RBP22.43■■□□□ 1.18
LSM6-207ENST00000515311 OXCT2Q9BYC2 517 aaPredicted RBP22.43■■□□□ 1.18
LSM6-207ENST00000515311 STK33Q9BYT3 514 aa22.43■■□□□ 1.18
LSM6-207ENST00000515311 ZBP1Q9H171 429 aa22.43■■□□□ 1.18
LSM6-207ENST00000515311 SNX25Q9H3E2 840 aa22.43■■□□□ 1.18
LSM6-207ENST00000515311 ALG13Q9NP73 1137 aaKnown RBP22.43■■□□□ 1.18
LSM6-207ENST00000515311 AJAP1Q9UKB5 411 aaPredicted RBP22.43■■□□□ 1.18
LSM6-207ENST00000515311 BARX2Q9UMQ3 279 aaPredicted RBP22.43■■□□□ 1.18
LSM6-207ENST00000515311 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.43■■□□□ 1.18
LSM6-207ENST00000515311 TIMM13Q9Y5L4 95 aaPredicted RBP22.43■■□□□ 1.18
LSM6-207ENST00000515311 A0A1W2PQJ5 194 aa22.42■■□□□ 1.18
LSM6-207ENST00000515311 URODP06132 367 aa22.42■■□□□ 1.18
LSM6-207ENST00000515311 CTSAP10619 480 aa22.42■■□□□ 1.18
LSM6-207ENST00000515311 ACO1P21399 889 aaKnown RBP22.42■■□□□ 1.18
LSM6-207ENST00000515311 GPM6BQ13491 265 aa22.42■■□□□ 1.18
LSM6-207ENST00000515311 TRIM14Q14142 442 aa22.42■■□□□ 1.18
LSM6-207ENST00000515311 KIAA0319Q5VV43 1072 aa22.42■■□□□ 1.18
LSM6-207ENST00000515311 UNC93AQ86WB7 457 aa22.42■■□□□ 1.18
LSM6-207ENST00000515311 ARNTL2Q8WYA1 636 aa22.42■■□□□ 1.18
LSM6-207ENST00000515311 B3GALT6Q96L58 329 aa22.42■■□□□ 1.18
LSM6-207ENST00000515311 CNTN6Q9UQ52 1028 aa22.42■■□□□ 1.18
LSM6-207ENST00000515311 SSX2IPQ9Y2D8 614 aa22.42■■□□□ 1.18
LSM6-207ENST00000515311 STXBP5LQ9Y2K9 1186 aa22.42■■□□□ 1.18
LSM6-207ENST00000515311 H7C4K7 107 aa22.41■■□□□ 1.18
LSM6-207ENST00000515311 GRM6O15303 877 aa22.41■■□□□ 1.18
LSM6-207ENST00000515311 CILPO75339 1184 aa22.41■■□□□ 1.18
LSM6-207ENST00000515311 CD58P19256 250 aa22.41■■□□□ 1.18
LSM6-207ENST00000515311 GNL1P36915 607 aaPredicted RBP22.41■■□□□ 1.18
LSM6-207ENST00000515311 JAM2P57087 298 aa22.41■■□□□ 1.18
LSM6-207ENST00000515311 CREMQ03060 361 aa22.41■■□□□ 1.18
LSM6-207ENST00000515311 RAPGEF1Q13905 1077 aa22.41■■□□□ 1.18
LSM6-207ENST00000515311 ARHGAP44Q17R89 818 aa22.41■■□□□ 1.18
LSM6-207ENST00000515311 ZNF280DQ6N043 979 aa22.41■■□□□ 1.18
LSM6-207ENST00000515311 CACNA2D4Q7Z3S7 1137 aa22.41■■□□□ 1.18
LSM6-207ENST00000515311 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.41■■□□□ 1.18
LSM6-207ENST00000515311 THEM5Q8N1Q8 247 aa22.41■■□□□ 1.18
LSM6-207ENST00000515311 POF1BQ8WVV4 589 aa22.41■■□□□ 1.18
LSM6-207ENST00000515311 RIN2Q8WYP3 895 aaPredicted RBP22.41■■□□□ 1.18
LSM6-207ENST00000515311 DNAI2Q9GZS0 605 aa22.41■■□□□ 1.18
LSM6-207ENST00000515311 LMAN2LQ9H0V9 348 aa22.41■■□□□ 1.18
LSM6-207ENST00000515311 CERS4Q9HA82 394 aa22.41■■□□□ 1.18
LSM6-207ENST00000515311 TLR9Q9NR96 1032 aa22.41■■□□□ 1.18
LSM6-207ENST00000515311 MRPL17Q9NRX2 175 aaKnown RBP22.41■■□□□ 1.18
LSM6-207ENST00000515311 DDX43Q9NXZ2 648 aaKnown RBP22.41■■□□□ 1.18
LSM6-207ENST00000515311 MYO6Q9UM54 1294 aa22.41■■□□□ 1.18
LSM6-207ENST00000515311 BACE2Q9Y5Z0 518 aa22.41■■□□□ 1.18
LSM6-207ENST00000515311 F8VZ95 297 aa22.4■■□□□ 1.18
LSM6-207ENST00000515311 DNAJB1P25685 340 aa22.4■■□□□ 1.18
LSM6-207ENST00000515311 PCSK1P29120 753 aa22.4■■□□□ 1.18
LSM6-207ENST00000515311 NDST1P52848 882 aa22.4■■□□□ 1.18
LSM6-207ENST00000515311 BMS1Q14692 1282 aaKnown RBP22.4■■□□□ 1.18
LSM6-207ENST00000515311 DRAP1Q14919 205 aaPredicted RBP22.4■■□□□ 1.18
LSM6-207ENST00000515311 PDE12Q6L8Q7 609 aaKnown RBP22.4■■□□□ 1.18
LSM6-207ENST00000515311 OSTM1Q86WC4 334 aa22.4■■□□□ 1.18
LSM6-207ENST00000515311 OR6B3Q8NGW1 331 aa22.4■■□□□ 1.18
LSM6-207ENST00000515311 LNX1Q8TBB1 728 aaPredicted RBP22.4■■□□□ 1.18
LSM6-207ENST00000515311 RTP3Q9BQQ7 232 aa22.4■■□□□ 1.18
LSM6-207ENST00000515311 ACBD6Q9BR61 282 aa22.4■■□□□ 1.18
LSM6-207ENST00000515311 GPR88Q9GZN0 384 aa22.4■■□□□ 1.18
LSM6-207ENST00000515311 ZNF576Q9H609 170 aa22.4■■□□□ 1.18
LSM6-207ENST00000515311 NLRC4Q9NPP4 1024 aa22.4■■□□□ 1.18
LSM6-207ENST00000515311 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.4■■□□□ 1.18
LSM6-207ENST00000515311 MTRRQ9UBK8 725 aa22.4■■□□□ 1.18
LSM6-207ENST00000515311 IRAK3Q9Y616 596 aa22.4■■□□□ 1.18
LSM6-207ENST00000515311 TBC1D4O60343 1298 aa22.39■■□□□ 1.17
LSM6-207ENST00000515311 LILRB3O75022 631 aa22.39■■□□□ 1.17
LSM6-207ENST00000515311 GYPCP04921 128 aa22.39■■□□□ 1.17
LSM6-207ENST00000515311 ZNF132P52740 706 aa22.39■■□□□ 1.17
LSM6-207ENST00000515311 PTPN14Q15678 1187 aa22.39■■□□□ 1.17
LSM6-207ENST00000515311 PSMD5Q16401 504 aa22.39■■□□□ 1.17
LSM6-207ENST00000515311 CTXN3Q4LDR2 81 aa22.39■■□□□ 1.17
LSM6-207ENST00000515311 BAP1Q92560 729 aa22.39■■□□□ 1.17
LSM6-207ENST00000515311 SPAG5Q96R06 1193 aa22.39■■□□□ 1.17
LSM6-207ENST00000515311 TCF25Q9BQ70 676 aa22.39■■□□□ 1.17
LSM6-207ENST00000515311 NT5C1AQ9BXI3 368 aa22.39■■□□□ 1.17
LSM6-207ENST00000515311 NGRNQ9NPE2 291 aaKnown RBP22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms