RNA–Protein interactions for RNA: ENST00000515239.5

CSF1R-208, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 3

Gene CSF1R, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-208ENST00000515239 KCNB2Q92953 911 aa12.91□□□□□ -0.34
CSF1R-208ENST00000515239 C18orf25Q96B23 403 aaPredicted RBP12.91□□□□□ -0.34
CSF1R-208ENST00000515239 JAKMIP1Q96N16 626 aaKnown RBP12.91□□□□□ -0.34
CSF1R-208ENST00000515239 P2RY13Q9BPV8 354 aa12.91□□□□□ -0.34
CSF1R-208ENST00000515239 POLR3CQ9BUI4 534 aaPredicted RBP12.91□□□□□ -0.34
CSF1R-208ENST00000515239 TOPORSQ9NS56 1045 aaPredicted RBP12.91□□□□□ -0.34
CSF1R-208ENST00000515239 TMEM74BQ9NUR3 256 aa12.91□□□□□ -0.34
CSF1R-208ENST00000515239 CACNA2D2Q9NY47 1150 aa12.91□□□□□ -0.34
CSF1R-208ENST00000515239 PCDHB8Q9UN66 801 aa12.91□□□□□ -0.34
CSF1R-208ENST00000515239 TNFSF13BQ9Y275 285 aa12.91□□□□□ -0.34
CSF1R-208ENST00000515239 ASB3Q9Y575 518 aa12.91□□□□□ -0.34
CSF1R-208ENST00000515239 M0QZQ0 153 aa12.9□□□□□ -0.34
CSF1R-208ENST00000515239 RPS6KB1P23443 525 aa12.9□□□□□ -0.34
CSF1R-208ENST00000515239 U2AF2P26368 475 aaKnown RBP eCLIP12.9□□□□□ -0.34
CSF1R-208ENST00000515239 MARCKSP29966 332 aaPredicted RBP12.9□□□□□ -0.34
CSF1R-208ENST00000515239 MCM4P33991 863 aa12.9□□□□□ -0.34
CSF1R-208ENST00000515239 NAMPTP43490 491 aa12.9□□□□□ -0.34
CSF1R-208ENST00000515239 MAPK8P45983 427 aa12.9□□□□□ -0.34
CSF1R-208ENST00000515239 DHPSP49366 369 aaPredicted RBP12.9□□□□□ -0.34
CSF1R-208ENST00000515239 CYP4F8P98187 520 aa12.9□□□□□ -0.34
CSF1R-208ENST00000515239 TRIM61Q5EBN2 209 aa12.9□□□□□ -0.34
CSF1R-208ENST00000515239 BLOC1S2Q6QNY1 142 aa12.9□□□□□ -0.34
CSF1R-208ENST00000515239 TTC9BQ8N6N2 239 aa12.9□□□□□ -0.34
CSF1R-208ENST00000515239 ATAD1Q8NBU5 361 aa12.9□□□□□ -0.34
CSF1R-208ENST00000515239 DEPTORQ8TB45 409 aa12.9□□□□□ -0.34
CSF1R-208ENST00000515239 OXER1Q8TDS5 423 aa12.9□□□□□ -0.34
CSF1R-208ENST00000515239 NAP1L4Q99733 375 aaKnown RBP12.9□□□□□ -0.34
CSF1R-208ENST00000515239 KIFC3Q9BVG8 833 aa12.9□□□□□ -0.34
CSF1R-208ENST00000515239 TPSD1Q9BZJ3 242 aa12.9□□□□□ -0.34
CSF1R-208ENST00000515239 IL21Q9HBE4 155 aa12.9□□□□□ -0.34
CSF1R-208ENST00000515239 POLD4Q9HCU8 107 aa12.9□□□□□ -0.34
CSF1R-208ENST00000515239 PTPRHQ9HD43 1115 aa12.9□□□□□ -0.34
CSF1R-208ENST00000515239 TBX20Q9UMR3 447 aa12.9□□□□□ -0.34
CSF1R-208ENST00000515239 CCL26Q9Y258 94 aa12.9□□□□□ -0.34
CSF1R-208ENST00000515239 TIMM13Q9Y5L4 95 aaPredicted RBP12.9□□□□□ -0.34
CSF1R-208ENST00000515239 MAST4O15021 2626 aa12.89□□□□□ -0.35
CSF1R-208ENST00000515239 SOAT2O75908 522 aa12.89□□□□□ -0.35
CSF1R-208ENST00000515239 SEC24BO95487 1268 aa12.89□□□□□ -0.35
CSF1R-208ENST00000515239 FGF19O95750 216 aa12.89□□□□□ -0.35
CSF1R-208ENST00000515239 ARSAP15289 507 aa12.89□□□□□ -0.35
CSF1R-208ENST00000515239 ENGP17813 658 aa12.89□□□□□ -0.35
CSF1R-208ENST00000515239 RDXP35241 583 aaKnown RBP12.89□□□□□ -0.35
CSF1R-208ENST00000515239 AMPD2Q01433 879 aa12.89□□□□□ -0.35
CSF1R-208ENST00000515239 YWHAHQ04917 246 aaPredicted RBP12.89□□□□□ -0.35
CSF1R-208ENST00000515239 RASSF3Q86WH2 238 aa12.89□□□□□ -0.35
CSF1R-208ENST00000515239 CMTM8Q8IZV2 173 aa12.89□□□□□ -0.35
CSF1R-208ENST00000515239 TMEM130Q8N3G9 435 aa12.89□□□□□ -0.35
CSF1R-208ENST00000515239 GLIS3Q8NEA6 775 aa12.89□□□□□ -0.35
CSF1R-208ENST00000515239 HNRNPLLQ8WVV9 542 aaKnown RBP12.89□□□□□ -0.35
CSF1R-208ENST00000515239 CCDC94Q9BW85 323 aaPredicted RBP12.89□□□□□ -0.35
CSF1R-208ENST00000515239 CDT1Q9H211 546 aa12.89□□□□□ -0.35
CSF1R-208ENST00000515239 TTC12Q9H892 705 aaPredicted RBP12.89□□□□□ -0.35
CSF1R-208ENST00000515239 CNTN3Q9P232 1028 aa12.89□□□□□ -0.35
CSF1R-208ENST00000515239 PI4KAP42356 2102 aa12.89□□□□□ -0.35
CSF1R-208ENST00000515239 ACACAQ13085 2346 aa12.89□□□□□ -0.35
CSF1R-208ENST00000515239 FAM205CA6NFA0 338 aa12.88□□□□□ -0.35
CSF1R-208ENST00000515239 CYSRT1A8MQ03 144 aa12.88□□□□□ -0.35
CSF1R-208ENST00000515239 CYP11B2P19099 503 aa12.88□□□□□ -0.35
CSF1R-208ENST00000515239 GJA4P35212 333 aa12.88□□□□□ -0.35
CSF1R-208ENST00000515239 EFNA5P52803 228 aa12.88□□□□□ -0.35
CSF1R-208ENST00000515239 SLC23A3Q6PIS1 610 aa12.88□□□□□ -0.35
CSF1R-208ENST00000515239 PADI6Q6TGC4 694 aa12.88□□□□□ -0.35
CSF1R-208ENST00000515239 APBB1IPQ7Z5R6 666 aaPredicted RBP12.88□□□□□ -0.35
CSF1R-208ENST00000515239 CATSPER3Q86XQ3 398 aa12.88□□□□□ -0.35
CSF1R-208ENST00000515239 TSTD1Q8NFU3 115 aa12.88□□□□□ -0.35
CSF1R-208ENST00000515239 RIN3Q8TB24 985 aa12.88□□□□□ -0.35
CSF1R-208ENST00000515239 USP13Q92995 863 aaPredicted RBP12.88□□□□□ -0.35
CSF1R-208ENST00000515239 ACDQ96AP0 544 aa12.88□□□□□ -0.35
CSF1R-208ENST00000515239 ACAP3Q96P50 834 aa12.88□□□□□ -0.35
CSF1R-208ENST00000515239 ACO2Q99798 780 aaKnown RBP12.88□□□□□ -0.35
CSF1R-208ENST00000515239 NUSAP1Q9BXS6 441 aaKnown RBP12.88□□□□□ -0.35
CSF1R-208ENST00000515239 OXCT2Q9BYC2 517 aaPredicted RBP12.88□□□□□ -0.35
CSF1R-208ENST00000515239 GJB4Q9NTQ9 266 aa12.88□□□□□ -0.35
CSF1R-208ENST00000515239 MBD1Q9UIS9 605 aaPredicted RBP12.88□□□□□ -0.35
CSF1R-208ENST00000515239 SNX14Q9Y5W7 946 aa12.88□□□□□ -0.35
CSF1R-208ENST00000515239 APC2O95996 2303 aa12.88□□□□□ -0.35
CSF1R-208ENST00000515239 MTMR11A4FU01 709 aa12.87□□□□□ -0.35
CSF1R-208ENST00000515239 OR6C75A6NL08 312 aa12.87□□□□□ -0.35
CSF1R-208ENST00000515239 K7ERI5 159 aa12.87□□□□□ -0.35
CSF1R-208ENST00000515239 TNFRSF10BO14763 440 aa12.87□□□□□ -0.35
CSF1R-208ENST00000515239 TXKP42681 527 aa12.87□□□□□ -0.35
CSF1R-208ENST00000515239 PTGER3P43115 390 aa12.87□□□□□ -0.35
CSF1R-208ENST00000515239 PPP2R5AQ15172 486 aa12.87□□□□□ -0.35
CSF1R-208ENST00000515239 ZNF423Q2M1K9 1284 aa12.87□□□□□ -0.35
CSF1R-208ENST00000515239 TMEM150AQ86TG1 271 aa12.87□□□□□ -0.35
CSF1R-208ENST00000515239 ITIH5Q86UX2 942 aa12.87□□□□□ -0.35
CSF1R-208ENST00000515239 SYT12Q8IV01 421 aa12.87□□□□□ -0.35
CSF1R-208ENST00000515239 OLIG1Q8TAK6 271 aa12.87□□□□□ -0.35
CSF1R-208ENST00000515239 LRIG1Q96JA1 1093 aa12.87□□□□□ -0.35
CSF1R-208ENST00000515239 CNOT6LQ96LI5 555 aaKnown RBP12.87□□□□□ -0.35
CSF1R-208ENST00000515239 NACC1Q96RE7 527 aa12.87□□□□□ -0.35
CSF1R-208ENST00000515239 LPIN3Q9BQK8 851 aa12.87□□□□□ -0.35
CSF1R-208ENST00000515239 CCDC86Q9H6F5 360 aaKnown RBP12.87□□□□□ -0.35
CSF1R-208ENST00000515239 HSFX1Q9UBD0 423 aa12.87□□□□□ -0.35
CSF1R-208ENST00000515239 ANTXRLA6NF34 631 aa12.86□□□□□ -0.35
CSF1R-208ENST00000515239 EIF4E1BA6NMX2 242 aaKnown RBP12.86□□□□□ -0.35
CSF1R-208ENST00000515239 ABLIM1O14639 778 aa12.86□□□□□ -0.35
CSF1R-208ENST00000515239 CPLX1O14810 134 aa12.86□□□□□ -0.35
CSF1R-208ENST00000515239 MED24O75448 989 aa12.86□□□□□ -0.35
CSF1R-208ENST00000515239 LARGE1O95461 756 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms