RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 DZANK1Q9NVP4 752 aa8.95□□□□□ -0.98
CCL28-204ENST00000514421 MTRRQ9UBK8 725 aa8.95□□□□□ -0.98
CCL28-204ENST00000514421 ITGA11Q9UKX5 1188 aa8.95□□□□□ -0.98
CCL28-204ENST00000514421 BARX2Q9UMQ3 279 aaPredicted RBP8.95□□□□□ -0.98
CCL28-204ENST00000514421 FAM50BQ9Y247 325 aa8.95□□□□□ -0.98
CCL28-204ENST00000514421 TTC28Q96AY4 2481 aa8.94□□□□□ -0.98
CCL28-204ENST00000514421 NLRC5Q86WI3 1866 aa8.94□□□□□ -0.98
CCL28-204ENST00000514421 TRIP11Q15643 1979 aa8.94□□□□□ -0.98
CCL28-204ENST00000514421 LGALS16A8MUM7 142 aa8.94□□□□□ -0.98
CCL28-204ENST00000514421 KPNA7A9QM74 516 aa8.94□□□□□ -0.98
CCL28-204ENST00000514421 CYB561D2O14569 222 aa8.94□□□□□ -0.98
CCL28-204ENST00000514421 SPTLC1O15269 473 aa8.94□□□□□ -0.98
CCL28-204ENST00000514421 TGM5O43548 720 aa8.94□□□□□ -0.98
CCL28-204ENST00000514421 TBC1D4O60343 1298 aa8.94□□□□□ -0.98
CCL28-204ENST00000514421 STX10O60499 249 aa8.94□□□□□ -0.98
CCL28-204ENST00000514421 TBX10O75333 385 aa8.94□□□□□ -0.98
CCL28-204ENST00000514421 GLUD1P00367 558 aa8.94□□□□□ -0.98
CCL28-204ENST00000514421 CST3P01034 146 aaPredicted RBP8.94□□□□□ -0.98
CCL28-204ENST00000514421 ITGB3P05106 788 aa8.94□□□□□ -0.98
CCL28-204ENST00000514421 CYP11A1P05108 521 aa8.94□□□□□ -0.98
CCL28-204ENST00000514421 KRT19P08727 400 aa8.94□□□□□ -0.98
CCL28-204ENST00000514421 POLR2BP30876 1174 aaKnown RBP8.94□□□□□ -0.98
CCL28-204ENST00000514421 CASP4P49662 377 aa8.94□□□□□ -0.98
CCL28-204ENST00000514421 COPB1P53618 953 aaKnown RBP8.94□□□□□ -0.98
CCL28-204ENST00000514421 MCCD1P59942 119 aaPredicted RBP8.94□□□□□ -0.98
CCL28-204ENST00000514421 CLDN10P78369 228 aa8.94□□□□□ -0.98
CCL28-204ENST00000514421 FKBP3Q00688 224 aaKnown RBP8.94□□□□□ -0.98
CCL28-204ENST00000514421 ENPEPQ07075 957 aa8.94□□□□□ -0.98
CCL28-204ENST00000514421 MYO1EQ12965 1108 aa8.94□□□□□ -0.98
CCL28-204ENST00000514421 TRIM14Q14142 442 aa8.94□□□□□ -0.98
CCL28-204ENST00000514421 FILIP1LQ4L180 1135 aa8.94□□□□□ -0.98
CCL28-204ENST00000514421 CTXN3Q4LDR2 81 aa8.94□□□□□ -0.98
CCL28-204ENST00000514421 ATAT1Q5SQI0 421 aa8.94□□□□□ -0.98
CCL28-204ENST00000514421 LMBRD2Q68DH5 695 aaPredicted RBP8.94□□□□□ -0.98
CCL28-204ENST00000514421 ANKRD40Q6AI12 368 aa8.94□□□□□ -0.98
CCL28-204ENST00000514421 RSPO2Q6UXX9 243 aaPredicted RBP8.94□□□□□ -0.98
CCL28-204ENST00000514421 NYAP1Q6ZVC0 841 aa8.94□□□□□ -0.98
CCL28-204ENST00000514421 INTS8Q75QN2 995 aaKnown RBP8.94□□□□□ -0.98
CCL28-204ENST00000514421 METTL23Q86XA0 190 aa8.94□□□□□ -0.98
CCL28-204ENST00000514421 FAM114A1Q8IWE2 563 aa8.94□□□□□ -0.98
CCL28-204ENST00000514421 THEM5Q8N1Q8 247 aa8.94□□□□□ -0.98
CCL28-204ENST00000514421 LRRC52Q8N7C0 313 aa8.94□□□□□ -0.98
CCL28-204ENST00000514421 KREMEN2Q8NCW0 462 aa8.94□□□□□ -0.98
CCL28-204ENST00000514421 ANKRD20A12PQ8NF67 263 aa8.94□□□□□ -0.98
CCL28-204ENST00000514421 ZNF461Q8TAF7 563 aa8.94□□□□□ -0.98
CCL28-204ENST00000514421 CXorf38Q8TB03 319 aa8.94□□□□□ -0.98
CCL28-204ENST00000514421 TMC2Q8TDI7 906 aa8.94□□□□□ -0.98
CCL28-204ENST00000514421 ZNF516Q92618 1163 aa8.94□□□□□ -0.98
CCL28-204ENST00000514421 ZNF560Q96MR9 790 aa8.94□□□□□ -0.98
CCL28-204ENST00000514421 CGRRF1Q99675 332 aa8.94□□□□□ -0.98
CCL28-204ENST00000514421 S1PR5Q9H228 398 aa8.94□□□□□ -0.98
CCL28-204ENST00000514421 DSEQ9UL01 958 aa8.94□□□□□ -0.98
CCL28-204ENST00000514421 TIMM13Q9Y5L4 95 aaPredicted RBP8.94□□□□□ -0.98
CCL28-204ENST00000514421 CITO14578 2027 aa8.93□□□□□ -0.98
CCL28-204ENST00000514421 OR6C75A6NL08 312 aa8.93□□□□□ -0.98
CCL28-204ENST00000514421 ADAM12O43184 909 aa8.93□□□□□ -0.98
CCL28-204ENST00000514421 TEX33O43247 280 aa8.93□□□□□ -0.98
CCL28-204ENST00000514421 MBTPS2O43462 519 aa8.93□□□□□ -0.98
CCL28-204ENST00000514421 NRDCO43847 1150 aa8.93□□□□□ -0.98
CCL28-204ENST00000514421 HUS1O60921 280 aa8.93□□□□□ -0.98
CCL28-204ENST00000514421 PHACTR2O75167 634 aa8.93□□□□□ -0.98
CCL28-204ENST00000514421 AKAP3O75969 853 aa8.93□□□□□ -0.98
CCL28-204ENST00000514421 ABLIM3O94929 683 aa8.93□□□□□ -0.98
CCL28-204ENST00000514421 C4BPAP04003 597 aaKnown RBP8.93□□□□□ -0.98
CCL28-204ENST00000514421 TUBB4AP04350 444 aa8.93□□□□□ -0.98
CCL28-204ENST00000514421 FAM163BP0C2L3 166 aa8.93□□□□□ -0.98
CCL28-204ENST00000514421 SPATA31D3P0C874 917 aa8.93□□□□□ -0.98
CCL28-204ENST00000514421 ODC1P11926 461 aa8.93□□□□□ -0.98
CCL28-204ENST00000514421 KRT13P13646 458 aa8.93□□□□□ -0.98
CCL28-204ENST00000514421 KCNQ1P51787 676 aa8.93□□□□□ -0.98
CCL28-204ENST00000514421 VAMP7P51809 220 aa8.93□□□□□ -0.98
CCL28-204ENST00000514421 MARSP56192 900 aaKnown RBP8.93□□□□□ -0.98
CCL28-204ENST00000514421 YWHAHQ04917 246 aaPredicted RBP8.93□□□□□ -0.98
CCL28-204ENST00000514421 ITIH3Q06033 890 aa8.93□□□□□ -0.98
CCL28-204ENST00000514421 SMAD4Q13485 552 aaKnown RBP8.93□□□□□ -0.98
CCL28-204ENST00000514421 TRPC3Q13507 836 aa8.93□□□□□ -0.98
CCL28-204ENST00000514421 CLUL1Q15846 466 aa8.93□□□□□ -0.98
CCL28-204ENST00000514421 TPD52L1Q16890 204 aaPredicted RBP8.93□□□□□ -0.98
CCL28-204ENST00000514421 SV2CQ496J9 727 aa8.93□□□□□ -0.98
CCL28-204ENST00000514421 E4F1Q66K89 784 aaPredicted RBP8.93□□□□□ -0.98
CCL28-204ENST00000514421 SCARA3Q6AZY7 606 aa8.93□□□□□ -0.98
CCL28-204ENST00000514421 OVOS1Q6IE37 1185 aa8.93□□□□□ -0.98
CCL28-204ENST00000514421 SLC8B1Q6J4K2 584 aa8.93□□□□□ -0.98
CCL28-204ENST00000514421 ZNF280DQ6N043 979 aa8.93□□□□□ -0.98
CCL28-204ENST00000514421 CES5AQ6NT32 575 aa8.93□□□□□ -0.98
CCL28-204ENST00000514421 CYP26C1Q6V0L0 522 aa8.93□□□□□ -0.98
CCL28-204ENST00000514421 SPATA31D4Q6ZUB0 917 aa8.93□□□□□ -0.98
CCL28-204ENST00000514421 RTL10Q7L3V2 364 aa8.93□□□□□ -0.98
CCL28-204ENST00000514421 DPH6Q7L8W6 267 aa8.93□□□□□ -0.98
CCL28-204ENST00000514421 GLYCTKQ8IVS8 523 aa8.93□□□□□ -0.98
CCL28-204ENST00000514421 FAM186BQ8IYM0 893 aa8.93□□□□□ -0.98
CCL28-204ENST00000514421 CCAR2Q8N163 923 aaKnown RBP8.93□□□□□ -0.98
CCL28-204ENST00000514421 C12orf76Q8N812 135 aaPredicted RBP8.93□□□□□ -0.98
CCL28-204ENST00000514421 SMRP1Q8NCR6 262 aa8.93□□□□□ -0.98
CCL28-204ENST00000514421 CMASQ8NFW8 434 aaPredicted RBP8.93□□□□□ -0.98
CCL28-204ENST00000514421 PLEKHO2Q8TD55 490 aa8.93□□□□□ -0.98
CCL28-204ENST00000514421 IQCDQ96DY2 449 aa8.93□□□□□ -0.98
CCL28-204ENST00000514421 HPDLQ96IR7 371 aa8.93□□□□□ -0.98
CCL28-204ENST00000514421 FAM84AQ96KN4 292 aa8.93□□□□□ -0.98
CCL28-204ENST00000514421 MKNK1Q9BUB5 465 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms