RNA–Protein interactions for RNA: ENST00000514006.1

CALCOCO2-222, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-222ENST00000514006 USP40Q9NVE5 1235 aa5.84□□□□□ -1.47
CALCOCO2-222ENST00000514006 XPR1Q9UBH6 696 aa5.84□□□□□ -1.47
CALCOCO2-222ENST00000514006 SLC45A2Q9UMX9 530 aa5.84□□□□□ -1.47
CALCOCO2-222ENST00000514006 B5MCH6 92 aa5.83□□□□□ -1.48
CALCOCO2-222ENST00000514006 EYA2O00167 538 aa5.83□□□□□ -1.48
CALCOCO2-222ENST00000514006 CHEK2O96017 543 aa5.83□□□□□ -1.48
CALCOCO2-222ENST00000514006 PIM1P11309 404 aaPredicted RBP5.83□□□□□ -1.48
CALCOCO2-222ENST00000514006 BTF3P20290 206 aaKnown RBP5.83□□□□□ -1.48
CALCOCO2-222ENST00000514006 ACVR2AP27037 513 aa5.83□□□□□ -1.48
CALCOCO2-222ENST00000514006 CLRN1P58418 232 aa5.83□□□□□ -1.48
CALCOCO2-222ENST00000514006 HGFACQ04756 655 aa5.83□□□□□ -1.48
CALCOCO2-222ENST00000514006 DUSP8Q13202 625 aa5.83□□□□□ -1.48
CALCOCO2-222ENST00000514006 TBR1Q16650 682 aa5.83□□□□□ -1.48
CALCOCO2-222ENST00000514006 ZNF568Q3ZCX4 644 aa5.83□□□□□ -1.48
CALCOCO2-222ENST00000514006 ARHGAP15Q53QZ3 475 aa5.83□□□□□ -1.48
CALCOCO2-222ENST00000514006 CRB2Q5IJ48 1285 aa5.83□□□□□ -1.48
CALCOCO2-222ENST00000514006 FBXO47Q5MNV8 452 aa5.83□□□□□ -1.48
CALCOCO2-222ENST00000514006 UTP14CQ5TAP6 766 aaKnown RBP5.83□□□□□ -1.48
CALCOCO2-222ENST00000514006 ANKRD45Q5TZF3 282 aa5.83□□□□□ -1.48
CALCOCO2-222ENST00000514006 LIN54Q6MZP7 749 aa5.83□□□□□ -1.48
CALCOCO2-222ENST00000514006 USP17L6PQ6QN14 398 aa5.83□□□□□ -1.48
CALCOCO2-222ENST00000514006 PRR23BQ6ZRT6 265 aa5.83□□□□□ -1.48
CALCOCO2-222ENST00000514006 GATAD2AQ86YP4 633 aa5.83□□□□□ -1.48
CALCOCO2-222ENST00000514006 STT3BQ8TCJ2 826 aa5.83□□□□□ -1.48
CALCOCO2-222ENST00000514006 RAPGEF4Q8WZA2 1011 aa5.83□□□□□ -1.48
CALCOCO2-222ENST00000514006 RABGGTAQ92696 567 aa5.83□□□□□ -1.48
CALCOCO2-222ENST00000514006 EID2BQ96D98 161 aa5.83□□□□□ -1.48
CALCOCO2-222ENST00000514006 PRPF18Q99633 342 aaKnown RBP5.83□□□□□ -1.48
CALCOCO2-222ENST00000514006 KATNAL1Q9BW62 490 aa5.83□□□□□ -1.48
CALCOCO2-222ENST00000514006 UNC45AQ9H3U1 944 aa5.83□□□□□ -1.48
CALCOCO2-222ENST00000514006 GSTO2Q9H4Y5 243 aa5.83□□□□□ -1.48
CALCOCO2-222ENST00000514006 KCNK12Q9HB15 430 aa5.83□□□□□ -1.48
CALCOCO2-222ENST00000514006 GCM1Q9NP62 436 aa5.83□□□□□ -1.48
CALCOCO2-222ENST00000514006 IL23AQ9NPF7 189 aa5.83□□□□□ -1.48
CALCOCO2-222ENST00000514006 NTMQ9P121 344 aa5.83□□□□□ -1.48
CALCOCO2-222ENST00000514006 ADAM29Q9UKF5 820 aa5.83□□□□□ -1.48
CALCOCO2-222ENST00000514006 ZDHHC9Q9Y397 364 aa5.83□□□□□ -1.48
CALCOCO2-222ENST00000514006 A0A087WZ62 844 aa5.82□□□□□ -1.48
CALCOCO2-222ENST00000514006 RAB27BO00194 218 aa5.82□□□□□ -1.48
CALCOCO2-222ENST00000514006 ASNA1O43681 348 aa5.82□□□□□ -1.48
CALCOCO2-222ENST00000514006 HYAL3O43820 417 aaPredicted RBP5.82□□□□□ -1.48
CALCOCO2-222ENST00000514006 POMCP01189 267 aa5.82□□□□□ -1.48
CALCOCO2-222ENST00000514006 LDHCP07864 332 aa5.82□□□□□ -1.48
CALCOCO2-222ENST00000514006 ITGA2BP08514 1039 aa5.82□□□□□ -1.48
CALCOCO2-222ENST00000514006 XRCC6P12956 609 aaKnown RBP eCLIP5.82□□□□□ -1.48
CALCOCO2-222ENST00000514006 POLE2P56282 527 aa5.82□□□□□ -1.48
CALCOCO2-222ENST00000514006 ADCK5Q3MIX3 580 aa5.82□□□□□ -1.48
CALCOCO2-222ENST00000514006 L1TD1Q5T7N2 865 aaKnown RBP5.82□□□□□ -1.48
CALCOCO2-222ENST00000514006 SULT6B1Q6IMI4 303 aa5.82□□□□□ -1.48
CALCOCO2-222ENST00000514006 RETSATQ6NUM9 610 aa5.82□□□□□ -1.48
CALCOCO2-222ENST00000514006 KLHL17Q6TDP4 642 aa5.82□□□□□ -1.48
CALCOCO2-222ENST00000514006 USP49Q70CQ1 688 aa5.82□□□□□ -1.48
CALCOCO2-222ENST00000514006 RALYLQ86SE5 291 aaKnown RBP5.82□□□□□ -1.48
CALCOCO2-222ENST00000514006 MOGAT3Q86VF5 341 aa5.82□□□□□ -1.48
CALCOCO2-222ENST00000514006 TMEFF1Q8IYR6 380 aa5.82□□□□□ -1.48
CALCOCO2-222ENST00000514006 FAM46DQ8NEK8 389 aa5.82□□□□□ -1.48
CALCOCO2-222ENST00000514006 SLC30A5Q8TAD4 765 aa5.82□□□□□ -1.48
CALCOCO2-222ENST00000514006 PPP1R9BQ96SB3 815 aa5.82□□□□□ -1.48
CALCOCO2-222ENST00000514006 SPATA5L1Q9BVQ7 753 aa5.82□□□□□ -1.48
CALCOCO2-222ENST00000514006 SLC26A6Q9BXS9 759 aa5.82□□□□□ -1.48
CALCOCO2-222ENST00000514006 SAYSD1Q9NPB0 183 aa5.82□□□□□ -1.48
CALCOCO2-222ENST00000514006 VPS45Q9NRW7 570 aa5.82□□□□□ -1.48
CALCOCO2-222ENST00000514006 FAM53CQ9NYF3 392 aa5.82□□□□□ -1.48
CALCOCO2-222ENST00000514006 KIF17Q9P2E2 1029 aa5.82□□□□□ -1.48
CALCOCO2-222ENST00000514006 HERC5Q9UII4 1024 aaKnown RBP5.82□□□□□ -1.48
CALCOCO2-222ENST00000514006 FBXO2Q9UK22 296 aaPredicted RBP5.82□□□□□ -1.48
CALCOCO2-222ENST00000514006 SCAF8Q9UPN6 1271 aaKnown RBP5.82□□□□□ -1.48
CALCOCO2-222ENST00000514006 AGAP1Q9UPQ3 857 aa5.82□□□□□ -1.48
CALCOCO2-222ENST00000514006 NR2E1Q9Y466 385 aa5.82□□□□□ -1.48
CALCOCO2-222ENST00000514006 IRAK3Q9Y616 596 aa5.82□□□□□ -1.48
CALCOCO2-222ENST00000514006 PNPLA7Q6ZV29 1317 aa5.81□□□□□ -1.48
CALCOCO2-222ENST00000514006 LOC102723971A0A1B0GUV8 181 aa5.81□□□□□ -1.48
CALCOCO2-222ENST00000514006 KCNQ3O43525 872 aa5.81□□□□□ -1.48
CALCOCO2-222ENST00000514006 AGFG2O95081 481 aa5.81□□□□□ -1.48
CALCOCO2-222ENST00000514006 MBD4O95243 580 aa5.81□□□□□ -1.48
CALCOCO2-222ENST00000514006 POLBP06746 335 aa5.81□□□□□ -1.48
CALCOCO2-222ENST00000514006 EGR1P18146 543 aa5.81□□□□□ -1.48
CALCOCO2-222ENST00000514006 CNTFP26441 200 aa5.81□□□□□ -1.48
CALCOCO2-222ENST00000514006 WNT3P56703 355 aa5.81□□□□□ -1.48
CALCOCO2-222ENST00000514006 DLG4P78352 724 aa5.81□□□□□ -1.48
CALCOCO2-222ENST00000514006 NFYCQ13952 458 aa5.81□□□□□ -1.48
CALCOCO2-222ENST00000514006 ARHGEF7Q14155 803 aa5.81□□□□□ -1.48
CALCOCO2-222ENST00000514006 MAPKAPK3Q16644 382 aa5.81□□□□□ -1.48
CALCOCO2-222ENST00000514006 FAM160B1Q5W0V3 765 aa5.81□□□□□ -1.48
CALCOCO2-222ENST00000514006 MCTP2Q6DN12 878 aa5.81□□□□□ -1.48
CALCOCO2-222ENST00000514006 CRTC1Q6UUV9 634 aa5.81□□□□□ -1.48
CALCOCO2-222ENST00000514006 ZDHHC24Q6UX98 284 aa5.81□□□□□ -1.48
CALCOCO2-222ENST00000514006 ADGRE4PQ86SQ3 457 aa5.81□□□□□ -1.48
CALCOCO2-222ENST00000514006 KRT73Q86Y46 540 aa5.81□□□□□ -1.48
CALCOCO2-222ENST00000514006 FTSJ3Q8IY81 847 aaKnown RBP5.81□□□□□ -1.48
CALCOCO2-222ENST00000514006 SLC17A8Q8NDX2 589 aa5.81□□□□□ -1.48
CALCOCO2-222ENST00000514006 TMIEQ8NEW7 156 aa5.81□□□□□ -1.48
CALCOCO2-222ENST00000514006 DNERQ8NFT8 737 aa5.81□□□□□ -1.48
CALCOCO2-222ENST00000514006 OTUD7AQ8TE49 926 aaPredicted RBP5.81□□□□□ -1.48
CALCOCO2-222ENST00000514006 SMCR8Q8TEV9 937 aaPredicted RBP5.81□□□□□ -1.48
CALCOCO2-222ENST00000514006 CFHR4Q92496 578 aa5.81□□□□□ -1.48
CALCOCO2-222ENST00000514006 SIGLEC10Q96LC7 697 aa5.81□□□□□ -1.48
CALCOCO2-222ENST00000514006 PYM1Q9BRP8 204 aaKnown RBP5.81□□□□□ -1.48
CALCOCO2-222ENST00000514006 KRTAP9-2Q9BYQ4 174 aa5.81□□□□□ -1.48
CALCOCO2-222ENST00000514006 CPEB1Q9BZB8 566 aaKnown RBP5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms