RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 PI4K2AQ9BTU6 479 aa10.87□□□□□ -0.67
NEDD9-214ENST00000513989 OXCT2Q9BYC2 517 aaPredicted RBP10.87□□□□□ -0.67
NEDD9-214ENST00000513989 EDEM3Q9BZQ6 932 aa10.87□□□□□ -0.67
NEDD9-214ENST00000513989 NIF3L1Q9GZT8 377 aa10.87□□□□□ -0.67
NEDD9-214ENST00000513989 XYLT2Q9H1B5 865 aa10.87□□□□□ -0.67
NEDD9-214ENST00000513989 SNX25Q9H3E2 840 aa10.87□□□□□ -0.67
NEDD9-214ENST00000513989 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.87□□□□□ -0.67
NEDD9-214ENST00000513989 FAM207AQ9NSI2 230 aaPredicted RBP10.87□□□□□ -0.67
NEDD9-214ENST00000513989 FBXL5Q9UKA1 691 aa10.87□□□□□ -0.67
NEDD9-214ENST00000513989 TECTAO75443 2155 aa10.86□□□□□ -0.67
NEDD9-214ENST00000513989 H7C4K7 107 aa10.86□□□□□ -0.67
NEDD9-214ENST00000513989 M0QZQ0 153 aa10.86□□□□□ -0.67
NEDD9-214ENST00000513989 TACC1O75410 805 aa10.86□□□□□ -0.67
NEDD9-214ENST00000513989 FGF18O76093 207 aa10.86□□□□□ -0.67
NEDD9-214ENST00000513989 KIF4AO95239 1232 aa10.86□□□□□ -0.67
NEDD9-214ENST00000513989 ADCY5O95622 1261 aa10.86□□□□□ -0.67
NEDD9-214ENST00000513989 IL9P15248 144 aa10.86□□□□□ -0.67
NEDD9-214ENST00000513989 TYMPP19971 482 aa10.86□□□□□ -0.67
NEDD9-214ENST00000513989 AARSP49588 968 aaKnown RBP eCLIP10.86□□□□□ -0.67
NEDD9-214ENST00000513989 ZNF75DP51815 510 aa10.86□□□□□ -0.67
NEDD9-214ENST00000513989 UBE3AQ05086 875 aa10.86□□□□□ -0.67
NEDD9-214ENST00000513989 KCNMA1Q12791 1236 aa10.86□□□□□ -0.67
NEDD9-214ENST00000513989 CUL2Q13617 745 aa10.86□□□□□ -0.67
NEDD9-214ENST00000513989 TRIM14Q14142 442 aa10.86□□□□□ -0.67
NEDD9-214ENST00000513989 LEXMQ3ZCV2 418 aa10.86□□□□□ -0.67
NEDD9-214ENST00000513989 TIGD5Q53EQ6 642 aa10.86□□□□□ -0.67
NEDD9-214ENST00000513989 FAM171A1Q5VUB5 890 aa10.86□□□□□ -0.67
NEDD9-214ENST00000513989 RRAGAQ7L523 313 aa10.86□□□□□ -0.67
NEDD9-214ENST00000513989 SLC39A11Q8N1S5 342 aa10.86□□□□□ -0.67
NEDD9-214ENST00000513989 LMO3Q8TAP4 145 aa10.86□□□□□ -0.67
NEDD9-214ENST00000513989 HASPINQ8TF76 798 aa10.86□□□□□ -0.67
NEDD9-214ENST00000513989 FAM84AQ96KN4 292 aa10.86□□□□□ -0.67
NEDD9-214ENST00000513989 SPAG5Q96R06 1193 aa10.86□□□□□ -0.67
NEDD9-214ENST00000513989 LRFN3Q9BTN0 628 aa10.86□□□□□ -0.67
NEDD9-214ENST00000513989 TTPALQ9BTX7 342 aa10.86□□□□□ -0.67
NEDD9-214ENST00000513989 NUCKS1Q9H1E3 243 aaKnown RBP10.86□□□□□ -0.67
NEDD9-214ENST00000513989 DNAJC12Q9UKB3 198 aa10.86□□□□□ -0.67
NEDD9-214ENST00000513989 PCDHB8Q9UN66 801 aa10.86□□□□□ -0.67
NEDD9-214ENST00000513989 LZTS1Q9Y250 596 aa10.86□□□□□ -0.67
NEDD9-214ENST00000513989 ITIH6Q6UXX5 1313 aa10.85□□□□□ -0.67
NEDD9-214ENST00000513989 C5orf67F2Z3F1 127 aa10.85□□□□□ -0.67
NEDD9-214ENST00000513989 PPEF2O14830 753 aa10.85□□□□□ -0.67
NEDD9-214ENST00000513989 CYP11A1P05108 521 aa10.85□□□□□ -0.67
NEDD9-214ENST00000513989 UCHL3P15374 230 aa10.85□□□□□ -0.67
NEDD9-214ENST00000513989 KCNA5P22460 613 aa10.85□□□□□ -0.67
NEDD9-214ENST00000513989 PCSK1P29120 753 aa10.85□□□□□ -0.67
NEDD9-214ENST00000513989 PBX3P40426 434 aa10.85□□□□□ -0.67
NEDD9-214ENST00000513989 BPIFB4P59827 614 aa10.85□□□□□ -0.67
NEDD9-214ENST00000513989 CREMQ03060 361 aa10.85□□□□□ -0.67
NEDD9-214ENST00000513989 YWHAHQ04917 246 aaPredicted RBP10.85□□□□□ -0.67
NEDD9-214ENST00000513989 GPM6BQ13491 265 aa10.85□□□□□ -0.67
NEDD9-214ENST00000513989 FIGNQ5HY92 759 aa10.85□□□□□ -0.67
NEDD9-214ENST00000513989 SPOPLQ6IQ16 392 aa10.85□□□□□ -0.67
NEDD9-214ENST00000513989 PDE12Q6L8Q7 609 aaKnown RBP10.85□□□□□ -0.67
NEDD9-214ENST00000513989 PHLDB3Q6NSJ2 640 aa10.85□□□□□ -0.67
NEDD9-214ENST00000513989 FUT10Q6P4F1 479 aa10.85□□□□□ -0.67
NEDD9-214ENST00000513989 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.85□□□□□ -0.67
NEDD9-214ENST00000513989 ANKS3Q6ZW76 656 aa10.85□□□□□ -0.67
NEDD9-214ENST00000513989 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.85□□□□□ -0.67
NEDD9-214ENST00000513989 CEP57Q86XR8 500 aa10.85□□□□□ -0.67
NEDD9-214ENST00000513989 VSTM4Q8IW00 320 aa10.85□□□□□ -0.67
NEDD9-214ENST00000513989 GPR65Q8IYL9 337 aa10.85□□□□□ -0.67
NEDD9-214ENST00000513989 VPS52Q8N1B4 723 aa10.85□□□□□ -0.67
NEDD9-214ENST00000513989 KLHL23Q8NBE8 558 aa10.85□□□□□ -0.67
NEDD9-214ENST00000513989 MICAL1Q8TDZ2 1067 aa10.85□□□□□ -0.67
NEDD9-214ENST00000513989 TNIP3Q96KP6 325 aa10.85□□□□□ -0.67
NEDD9-214ENST00000513989 C1QTNF1Q9BXJ1 281 aa10.85□□□□□ -0.67
NEDD9-214ENST00000513989 STK33Q9BYT3 514 aa10.85□□□□□ -0.67
NEDD9-214ENST00000513989 APOBEC3GQ9HC16 384 aaKnown RBP10.85□□□□□ -0.67
NEDD9-214ENST00000513989 NGRNQ9NPE2 291 aaKnown RBP10.85□□□□□ -0.67
NEDD9-214ENST00000513989 MRPL17Q9NRX2 175 aaKnown RBP10.85□□□□□ -0.67
NEDD9-214ENST00000513989 CEP72Q9P209 647 aa10.85□□□□□ -0.67
NEDD9-214ENST00000513989 CACNG4Q9UBN1 327 aa10.85□□□□□ -0.67
NEDD9-214ENST00000513989 KIAA1257Q9ULG3 409 aa10.85□□□□□ -0.67
NEDD9-214ENST00000513989 SIK3Q9Y2K2 1263 aa10.85□□□□□ -0.67
NEDD9-214ENST00000513989 LUC7L2Q9Y383 392 aaKnown RBP10.85□□□□□ -0.67
NEDD9-214ENST00000513989 SPTLC1O15269 473 aa10.84□□□□□ -0.67
NEDD9-214ENST00000513989 B4GALT3O60512 393 aa10.84□□□□□ -0.67
NEDD9-214ENST00000513989 CXCL14O95715 111 aa10.84□□□□□ -0.67
NEDD9-214ENST00000513989 SOD2P04179 222 aa10.84□□□□□ -0.67
NEDD9-214ENST00000513989 URODP06132 367 aa10.84□□□□□ -0.67
NEDD9-214ENST00000513989 WEE2P0C1S8 567 aa10.84□□□□□ -0.67
NEDD9-214ENST00000513989 KRT5P13647 590 aa10.84□□□□□ -0.67
NEDD9-214ENST00000513989 FGFR3P22607 806 aa10.84□□□□□ -0.67
NEDD9-214ENST00000513989 WARSP23381 471 aaKnown RBP10.84□□□□□ -0.67
NEDD9-214ENST00000513989 LTBRP36941 435 aa10.84□□□□□ -0.67
NEDD9-214ENST00000513989 USP8P40818 1118 aa10.84□□□□□ -0.67
NEDD9-214ENST00000513989 STAT1P42224 750 aa10.84□□□□□ -0.67
NEDD9-214ENST00000513989 BRCC3P46736 316 aa10.84□□□□□ -0.67
NEDD9-214ENST00000513989 POLR2FP61218 127 aaKnown RBP10.84□□□□□ -0.67
NEDD9-214ENST00000513989 TSPY1Q01534 308 aa10.84□□□□□ -0.67
NEDD9-214ENST00000513989 RAPGEF1Q13905 1077 aa10.84□□□□□ -0.67
NEDD9-214ENST00000513989 CAMK1Q14012 370 aa10.84□□□□□ -0.67
NEDD9-214ENST00000513989 ARHGAP44Q17R89 818 aa10.84□□□□□ -0.67
NEDD9-214ENST00000513989 SOWAHAQ2M3V2 549 aa10.84□□□□□ -0.67
NEDD9-214ENST00000513989 TCEAL5Q5H9L2 206 aa10.84□□□□□ -0.67
NEDD9-214ENST00000513989 WSCD1Q658N2 575 aa10.84□□□□□ -0.67
NEDD9-214ENST00000513989 OVOS1Q6IE37 1185 aa10.84□□□□□ -0.67
NEDD9-214ENST00000513989 CD300LGQ6UXG3 332 aa10.84□□□□□ -0.67
NEDD9-214ENST00000513989 TMC7Q7Z402 723 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms