RNA–Protein interactions for RNA: ENST00000513677.5

GYPB-215, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 221 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-215ENST00000513677 PALB2Q86YC2 1186 aa6.48□□□□□ -1.37
GYPB-215ENST00000513677 REXO1Q8N1G1 1221 aaKnown RBP6.48□□□□□ -1.37
GYPB-215ENST00000513677 SHKBP1Q8TBC3 707 aa6.48□□□□□ -1.37
GYPB-215ENST00000513677 SMG7Q92540 1137 aaKnown RBP6.48□□□□□ -1.37
GYPB-215ENST00000513677 ELMO3Q96BJ8 720 aa6.48□□□□□ -1.37
GYPB-215ENST00000513677 CCDC136Q96JN2 1154 aa6.48□□□□□ -1.37
GYPB-215ENST00000513677 TBC1D32Q96NH3 1257 aa6.48□□□□□ -1.37
GYPB-215ENST00000513677 MTA3Q9BTC8 594 aa6.48□□□□□ -1.37
GYPB-215ENST00000513677 APOL6Q9BWW8 343 aa6.48□□□□□ -1.37
GYPB-215ENST00000513677 VN1R3Q9BXE9 311 aa6.48□□□□□ -1.37
GYPB-215ENST00000513677 TEKT3Q9BXF9 490 aa6.48□□□□□ -1.37
GYPB-215ENST00000513677 LSG1Q9H089 658 aaKnown RBP6.48□□□□□ -1.37
GYPB-215ENST00000513677 GLT8D2Q9H1C3 349 aa6.48□□□□□ -1.37
GYPB-215ENST00000513677 UNC45AQ9H3U1 944 aa6.48□□□□□ -1.37
GYPB-215ENST00000513677 C6orf50Q9HD87 102 aa6.48□□□□□ -1.37
GYPB-215ENST00000513677 MRPL17Q9NRX2 175 aaKnown RBP6.48□□□□□ -1.37
GYPB-215ENST00000513677 SUCLA2Q9P2R7 463 aaPredicted RBP6.48□□□□□ -1.37
GYPB-215ENST00000513677 FAN1Q9Y2M0 1017 aa6.48□□□□□ -1.37
GYPB-215ENST00000513677 FAM186AA6NE01 2351 aa6.48□□□□□ -1.37
GYPB-215ENST00000513677 CLUHO75153 1309 aa6.48□□□□□ -1.37
GYPB-215ENST00000513677 RIF1Q5UIP0 2472 aaKnown RBP6.48□□□□□ -1.37
GYPB-215ENST00000513677 DMDP11532 3685 aa6.47□□□□□ -1.37
GYPB-215ENST00000513677 hCG_1984214I3L0E3 225 aa6.47□□□□□ -1.37
GYPB-215ENST00000513677 NRP1O14786 923 aa6.47□□□□□ -1.37
GYPB-215ENST00000513677 INPPL1O15357 1258 aa6.47□□□□□ -1.37
GYPB-215ENST00000513677 N4BP1O75113 896 aaKnown RBP6.47□□□□□ -1.37
GYPB-215ENST00000513677 LRRN2O75325 713 aa6.47□□□□□ -1.37
GYPB-215ENST00000513677 OFD1O75665 1012 aa6.47□□□□□ -1.37
GYPB-215ENST00000513677 RFPL2O75678 378 aa6.47□□□□□ -1.37
GYPB-215ENST00000513677 DDHD2O94830 711 aa6.47□□□□□ -1.37
GYPB-215ENST00000513677 ALDH2P05091 517 aa6.47□□□□□ -1.37
GYPB-215ENST00000513677 URODP06132 367 aa6.47□□□□□ -1.37
GYPB-215ENST00000513677 CYP3A4P08684 503 aa6.47□□□□□ -1.37
GYPB-215ENST00000513677 CPA1P15085 419 aa6.47□□□□□ -1.37
GYPB-215ENST00000513677 TFE3P19532 575 aaPredicted RBP6.47□□□□□ -1.37
GYPB-215ENST00000513677 AKAP17AQ02040 695 aaKnown RBP6.47□□□□□ -1.37
GYPB-215ENST00000513677 INPP5AQ14642 412 aa6.47□□□□□ -1.37
GYPB-215ENST00000513677 NONOQ15233 471 aaKnown RBP eCLIP6.47□□□□□ -1.37
GYPB-215ENST00000513677 PFKFB3Q16875 520 aaPredicted RBP6.47□□□□□ -1.37
GYPB-215ENST00000513677 LRCH2Q5VUJ6 765 aa6.47□□□□□ -1.37
GYPB-215ENST00000513677 FAM43BQ6ZT52 329 aaPredicted RBP6.47□□□□□ -1.37
GYPB-215ENST00000513677 TAS1R1Q7RTX1 841 aa6.47□□□□□ -1.37
GYPB-215ENST00000513677 MIER3Q7Z3K6 550 aa6.47□□□□□ -1.37
GYPB-215ENST00000513677 SGMS1Q86VZ5 419 aa6.47□□□□□ -1.37
GYPB-215ENST00000513677 ZDHHC13Q8IUH4 622 aa6.47□□□□□ -1.37
GYPB-215ENST00000513677 SMYD4Q8IYR2 804 aaPredicted RBP6.47□□□□□ -1.37
GYPB-215ENST00000513677 SHISA5Q8N114 240 aa6.47□□□□□ -1.37
GYPB-215ENST00000513677 SLC44A3Q8N4M1 653 aa6.47□□□□□ -1.37
GYPB-215ENST00000513677 LINC01465Q8N7H1 131 aa6.47□□□□□ -1.37
GYPB-215ENST00000513677 ZNF713Q8N859 430 aaPredicted RBP6.47□□□□□ -1.37
GYPB-215ENST00000513677 RNF214Q8ND24 703 aa6.47□□□□□ -1.37
GYPB-215ENST00000513677 PHKBQ93100 1093 aa6.47□□□□□ -1.37
GYPB-215ENST00000513677 PGBD4Q96DM1 585 aa6.47□□□□□ -1.37
GYPB-215ENST00000513677 B3GALT6Q96L58 329 aa6.47□□□□□ -1.37
GYPB-215ENST00000513677 MYADMQ96S97 322 aa6.47□□□□□ -1.37
GYPB-215ENST00000513677 FOXQ1Q9C009 403 aa6.47□□□□□ -1.37
GYPB-215ENST00000513677 IGSF9Q9P2J2 1179 aa6.47□□□□□ -1.37
GYPB-215ENST00000513677 SIT1Q9Y3P8 196 aa6.47□□□□□ -1.37
GYPB-215ENST00000513677 PCDHB2Q9Y5E7 798 aa6.47□□□□□ -1.37
GYPB-215ENST00000513677 COL4A3Q01955 1670 aa6.46□□□□□ -1.37
GYPB-215ENST00000513677 PRAMEF27A3QJZ7 478 aa6.46□□□□□ -1.38
GYPB-215ENST00000513677 F8W810 466 aa6.46□□□□□ -1.38
GYPB-215ENST00000513677 MSH4O15457 936 aa6.46□□□□□ -1.38
GYPB-215ENST00000513677 TEX28O15482 410 aa6.46□□□□□ -1.38
GYPB-215ENST00000513677 KRT37O76014 449 aa6.46□□□□□ -1.38
GYPB-215ENST00000513677 GLUD1P00367 558 aa6.46□□□□□ -1.38
GYPB-215ENST00000513677 TGFB1P01137 390 aa6.46□□□□□ -1.38
GYPB-215ENST00000513677 F13BP05160 661 aa6.46□□□□□ -1.38
GYPB-215ENST00000513677 SP9P0CG40 484 aa6.46□□□□□ -1.38
GYPB-215ENST00000513677 SRGAP2CP0DJJ0 459 aa6.46□□□□□ -1.38
GYPB-215ENST00000513677 SRFP11831 508 aa6.46□□□□□ -1.38
GYPB-215ENST00000513677 RPL17P18621 184 aaKnown RBP6.46□□□□□ -1.38
GYPB-215ENST00000513677 ADMP35318 185 aa6.46□□□□□ -1.38
GYPB-215ENST00000513677 JAK3P52333 1124 aa6.46□□□□□ -1.38
GYPB-215ENST00000513677 PUM1Q14671 1186 aaKnown RBP eCLIP6.46□□□□□ -1.38
GYPB-215ENST00000513677 UBXN2BQ14CS0 331 aa6.46□□□□□ -1.38
GYPB-215ENST00000513677 NECTIN1Q15223 517 aa6.46□□□□□ -1.38
GYPB-215ENST00000513677 ADCK5Q3MIX3 580 aa6.46□□□□□ -1.38
GYPB-215ENST00000513677 WIPI1Q5MNZ9 446 aaPredicted RBP6.46□□□□□ -1.38
GYPB-215ENST00000513677 LRFN4Q6PJG9 635 aa6.46□□□□□ -1.38
GYPB-215ENST00000513677 DCLRE1AQ6PJP8 1040 aa6.46□□□□□ -1.38
GYPB-215ENST00000513677 ZC3H14Q6PJT7 736 aaKnown RBP6.46□□□□□ -1.38
GYPB-215ENST00000513677 C15orf39Q6ZRI6 1047 aa6.46□□□□□ -1.38
GYPB-215ENST00000513677 PHC3Q8NDX5 983 aa6.46□□□□□ -1.38
GYPB-215ENST00000513677 CCDC12Q8WUD4 166 aaPredicted RBP6.46□□□□□ -1.38
GYPB-215ENST00000513677 RUBCNQ92622 972 aa6.46□□□□□ -1.38
GYPB-215ENST00000513677 RABGGTAQ92696 567 aa6.46□□□□□ -1.38
GYPB-215ENST00000513677 STAMQ92783 540 aa6.46□□□□□ -1.38
GYPB-215ENST00000513677 ISL2Q96A47 359 aa6.46□□□□□ -1.38
GYPB-215ENST00000513677 PLPPR2Q96GM1 343 aa6.46□□□□□ -1.38
GYPB-215ENST00000513677 SLC26A6Q9BXS9 759 aa6.46□□□□□ -1.38
GYPB-215ENST00000513677 INO80BQ9C086 356 aaPredicted RBP6.46□□□□□ -1.38
GYPB-215ENST00000513677 MIR1-1HGQ9H1L0 117 aa6.46□□□□□ -1.38
GYPB-215ENST00000513677 RSAD1Q9HA92 442 aa6.46□□□□□ -1.38
GYPB-215ENST00000513677 SSU72Q9NP77 194 aaKnown RBP6.46□□□□□ -1.38
GYPB-215ENST00000513677 ARHGEF3Q9NR81 526 aa6.46□□□□□ -1.38
GYPB-215ENST00000513677 CHST12Q9NRB3 414 aa6.46□□□□□ -1.38
GYPB-215ENST00000513677 SPATA6Q9NWH7 488 aaPredicted RBP6.46□□□□□ -1.38
GYPB-215ENST00000513677 VPS54Q9P1Q0 977 aa6.46□□□□□ -1.38
GYPB-215ENST00000513677 NCDNQ9UBB6 729 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms