RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 BMP6P22004 513 aa10.45□□□□□ -0.74
RNF4-221ENST00000513643 AP3M2P53677 418 aa10.45□□□□□ -0.74
RNF4-221ENST00000513643 NTHL1P78549 312 aa10.45□□□□□ -0.74
RNF4-221ENST00000513643 SMARCB1Q12824 385 aa10.45□□□□□ -0.74
RNF4-221ENST00000513643 EDRF1Q3B7T1 1238 aa10.45□□□□□ -0.74
RNF4-221ENST00000513643 PRSS36Q5K4E3 855 aa10.45□□□□□ -0.74
RNF4-221ENST00000513643 ZNF658Q5TYW1 1059 aaPredicted RBP10.45□□□□□ -0.74
RNF4-221ENST00000513643 BMP8AQ7Z5Y6 402 aa10.45□□□□□ -0.74
RNF4-221ENST00000513643 GRASPQ7Z6J2 395 aaPredicted RBP10.45□□□□□ -0.74
RNF4-221ENST00000513643 USP37Q86T82 979 aa10.45□□□□□ -0.74
RNF4-221ENST00000513643 OSTM1Q86WC4 334 aa10.45□□□□□ -0.74
RNF4-221ENST00000513643 TMEM86AQ8N2M4 240 aa10.45□□□□□ -0.74
RNF4-221ENST00000513643 TDRD5Q8NAT2 981 aaKnown RBP10.45□□□□□ -0.74
RNF4-221ENST00000513643 KBTBD7Q8WVZ9 684 aa10.45□□□□□ -0.74
RNF4-221ENST00000513643 ASIC4Q96FT7 647 aa10.45□□□□□ -0.74
RNF4-221ENST00000513643 CCDC34Q96HJ3 373 aa10.45□□□□□ -0.74
RNF4-221ENST00000513643 ANKRD36BP1Q96IX9 119 aa10.45□□□□□ -0.74
RNF4-221ENST00000513643 ACBD6Q9BR61 282 aa10.45□□□□□ -0.74
RNF4-221ENST00000513643 DNAJC25Q9H1X3 360 aa10.45□□□□□ -0.74
RNF4-221ENST00000513643 LIMD1Q9UGP4 676 aa10.45□□□□□ -0.74
RNF4-221ENST00000513643 ZFP37Q9Y6Q3 630 aaPredicted RBP10.45□□□□□ -0.74
RNF4-221ENST00000513643 PRR33A8MZF0 331 aa10.44□□□□□ -0.74
RNF4-221ENST00000513643 CALUO43852 315 aaPredicted RBP10.44□□□□□ -0.74
RNF4-221ENST00000513643 TACC1O75410 805 aa10.44□□□□□ -0.74
RNF4-221ENST00000513643 VNN1O95497 513 aa10.44□□□□□ -0.74
RNF4-221ENST00000513643 TNNC2P02585 160 aa10.44□□□□□ -0.74
RNF4-221ENST00000513643 DLATP10515 647 aaKnown RBP10.44□□□□□ -0.74
RNF4-221ENST00000513643 FSHRP23945 695 aa10.44□□□□□ -0.74
RNF4-221ENST00000513643 PRCPP42785 496 aa10.44□□□□□ -0.74
RNF4-221ENST00000513643 ARPP19P56211 112 aa10.44□□□□□ -0.74
RNF4-221ENST00000513643 DLG4P78352 724 aa10.44□□□□□ -0.74
RNF4-221ENST00000513643 DUSP4Q13115 394 aa10.44□□□□□ -0.74
RNF4-221ENST00000513643 SLC5A9Q2M3M2 681 aa10.44□□□□□ -0.74
RNF4-221ENST00000513643 ZACNQ401N2 412 aa10.44□□□□□ -0.74
RNF4-221ENST00000513643 TDRD10Q5VZ19 366 aaKnown RBP10.44□□□□□ -0.74
RNF4-221ENST00000513643 FAM171BQ6P995 826 aa10.44□□□□□ -0.74
RNF4-221ENST00000513643 FOXR2Q6PJQ5 311 aa10.44□□□□□ -0.74
RNF4-221ENST00000513643 TRIM67Q6ZTA4 783 aa10.44□□□□□ -0.74
RNF4-221ENST00000513643 SMYD4Q8IYR2 804 aaPredicted RBP10.44□□□□□ -0.74
RNF4-221ENST00000513643 ADSSL1Q8N142 457 aa10.44□□□□□ -0.74
RNF4-221ENST00000513643 ATAD1Q8NBU5 361 aa10.44□□□□□ -0.74
RNF4-221ENST00000513643 ITFG1Q8TB96 612 aa10.44□□□□□ -0.74
RNF4-221ENST00000513643 C2orf15Q8WU43 125 aaKnown RBP10.44□□□□□ -0.74
RNF4-221ENST00000513643 NXPE3Q969Y0 559 aa10.44□□□□□ -0.74
RNF4-221ENST00000513643 CCDC47Q96A33 483 aaKnown RBP10.44□□□□□ -0.74
RNF4-221ENST00000513643 CCDC127Q96BQ5 260 aa10.44□□□□□ -0.74
RNF4-221ENST00000513643 ACSF2Q96CM8 615 aaPredicted RBP10.44□□□□□ -0.74
RNF4-221ENST00000513643 HPDLQ96IR7 371 aa10.44□□□□□ -0.74
RNF4-221ENST00000513643 LRFN3Q9BTN0 628 aa10.44□□□□□ -0.74
RNF4-221ENST00000513643 GTPBP4Q9BZE4 634 aaKnown RBP10.44□□□□□ -0.74
RNF4-221ENST00000513643 KCNK12Q9HB15 430 aa10.44□□□□□ -0.74
RNF4-221ENST00000513643 CYP4F11Q9HBI6 524 aa10.44□□□□□ -0.74
RNF4-221ENST00000513643 TMLHEQ9NVH6 421 aa10.44□□□□□ -0.74
RNF4-221ENST00000513643 RMND1Q9NWS8 449 aa10.44□□□□□ -0.74
RNF4-221ENST00000513643 HCFC1R1Q9NWW0 138 aa10.44□□□□□ -0.74
RNF4-221ENST00000513643 IGSF9Q9P2J2 1179 aa10.44□□□□□ -0.74
RNF4-221ENST00000513643 CDH7Q9ULB5 785 aa10.44□□□□□ -0.74
RNF4-221ENST00000513643 MAPK8IP1Q9UQF2 711 aa10.44□□□□□ -0.74
RNF4-221ENST00000513643 NME7Q9Y5B8 376 aa10.44□□□□□ -0.74
RNF4-221ENST00000513643 CACNA1HO95180 2353 aa10.44□□□□□ -0.74
RNF4-221ENST00000513643 MUC6Q6W4X9 2439 aa10.43□□□□□ -0.74
RNF4-221ENST00000513643 TSC2P49815 1807 aa10.43□□□□□ -0.74
RNF4-221ENST00000513643 PRRG1O14668 218 aa10.43□□□□□ -0.74
RNF4-221ENST00000513643 HUS1O60921 280 aa10.43□□□□□ -0.74
RNF4-221ENST00000513643 SMC2O95347 1197 aa10.43□□□□□ -0.74
RNF4-221ENST00000513643 RHOP08100 348 aa10.43□□□□□ -0.74
RNF4-221ENST00000513643 CPB1P15086 417 aa10.43□□□□□ -0.74
RNF4-221ENST00000513643 PTPN2P17706 415 aa10.43□□□□□ -0.74
RNF4-221ENST00000513643 TNNI1P19237 187 aa10.43□□□□□ -0.74
RNF4-221ENST00000513643 WARSP23381 471 aaKnown RBP10.43□□□□□ -0.74
RNF4-221ENST00000513643 SP100P23497 879 aaPredicted RBP10.43□□□□□ -0.74
RNF4-221ENST00000513643 ATICP31939 592 aa10.43□□□□□ -0.74
RNF4-221ENST00000513643 ELF1P32519 619 aa10.43□□□□□ -0.74
RNF4-221ENST00000513643 CCR2P41597 374 aa10.43□□□□□ -0.74
RNF4-221ENST00000513643 LHX1P48742 406 aa10.43□□□□□ -0.74
RNF4-221ENST00000513643 PMS1P54277 932 aaKnown RBP10.43□□□□□ -0.74
RNF4-221ENST00000513643 UBE2HP62256 183 aa10.43□□□□□ -0.74
RNF4-221ENST00000513643 MYO1EQ12965 1108 aa10.43□□□□□ -0.74
RNF4-221ENST00000513643 MORC3Q14149 939 aa10.43□□□□□ -0.74
RNF4-221ENST00000513643 TMEM31Q5JXX7 168 aa10.43□□□□□ -0.74
RNF4-221ENST00000513643 SV2AQ7L0J3 742 aa10.43□□□□□ -0.74
RNF4-221ENST00000513643 METTL23Q86XA0 190 aa10.43□□□□□ -0.74
RNF4-221ENST00000513643 TMC8Q8IU68 726 aa10.43□□□□□ -0.74
RNF4-221ENST00000513643 NPAS3Q8IXF0 933 aa10.43□□□□□ -0.74
RNF4-221ENST00000513643 UBALD2Q8IYN6 164 aa10.43□□□□□ -0.74
RNF4-221ENST00000513643 THEM5Q8N1Q8 247 aa10.43□□□□□ -0.74
RNF4-221ENST00000513643 TTC9BQ8N6N2 239 aa10.43□□□□□ -0.74
RNF4-221ENST00000513643 ERCC4Q92889 916 aaPredicted RBP10.43□□□□□ -0.74
RNF4-221ENST00000513643 FGF13Q92913 245 aa10.43□□□□□ -0.74
RNF4-221ENST00000513643 FNBP1Q96RU3 617 aa10.43□□□□□ -0.74
RNF4-221ENST00000513643 MKNK1Q9BUB5 465 aa10.43□□□□□ -0.74
RNF4-221ENST00000513643 PIDD1Q9HB75 910 aa10.43□□□□□ -0.74
RNF4-221ENST00000513643 TSHZ2Q9NRE2 1034 aa10.43□□□□□ -0.74
RNF4-221ENST00000513643 SORCS3Q9UPU3 1222 aa10.43□□□□□ -0.74
RNF4-221ENST00000513643 YIPF1Q9Y548 306 aa10.43□□□□□ -0.74
RNF4-221ENST00000513643 SNX9Q9Y5X1 595 aa10.43□□□□□ -0.74
RNF4-221ENST00000513643 ZNF318Q5VUA4 2279 aa10.43□□□□□ -0.74
RNF4-221ENST00000513643 SPDYE4A6NLX3 237 aa10.42□□□□□ -0.74
RNF4-221ENST00000513643 PPP1R3GB7ZBB8 358 aa10.42□□□□□ -0.74
RNF4-221ENST00000513643 ASGR2P07307 311 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms