RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 TNNC1P63316 161 aa8.14□□□□□ -1.11
HMGXB3-204ENST00000513318 BMS1Q14692 1282 aaKnown RBP8.14□□□□□ -1.11
HMGXB3-204ENST00000513318 USP41Q3LFD5 358 aa8.14□□□□□ -1.11
HMGXB3-204ENST00000513318 TIGD5Q53EQ6 642 aa8.14□□□□□ -1.11
HMGXB3-204ENST00000513318 ZNF667Q5HYK9 610 aa8.14□□□□□ -1.11
HMGXB3-204ENST00000513318 WDR44Q5JSH3 913 aa8.14□□□□□ -1.11
HMGXB3-204ENST00000513318 FKBP15Q5T1M5 1219 aa8.14□□□□□ -1.11
HMGXB3-204ENST00000513318 FAM171A1Q5VUB5 890 aa8.14□□□□□ -1.11
HMGXB3-204ENST00000513318 PDE12Q6L8Q7 609 aaKnown RBP8.14□□□□□ -1.11
HMGXB3-204ENST00000513318 DSTYKQ6XUX3 929 aa8.14□□□□□ -1.11
HMGXB3-204ENST00000513318 GBP6Q6ZN66 633 aa8.14□□□□□ -1.11
HMGXB3-204ENST00000513318 DPH6Q7L8W6 267 aa8.14□□□□□ -1.11
HMGXB3-204ENST00000513318 APTXQ7Z2E3 356 aaKnown RBP8.14□□□□□ -1.11
HMGXB3-204ENST00000513318 GPR65Q8IYL9 337 aa8.14□□□□□ -1.11
HMGXB3-204ENST00000513318 VPS52Q8N1B4 723 aa8.14□□□□□ -1.11
HMGXB3-204ENST00000513318 TMEM86AQ8N2M4 240 aa8.14□□□□□ -1.11
HMGXB3-204ENST00000513318 APPL2Q8NEU8 664 aa8.14□□□□□ -1.11
HMGXB3-204ENST00000513318 SPATA18Q8TC71 538 aa8.14□□□□□ -1.11
HMGXB3-204ENST00000513318 SPPL3Q8TCT6 385 aa8.14□□□□□ -1.11
HMGXB3-204ENST00000513318 GDPD5Q8WTR4 605 aa8.14□□□□□ -1.11
HMGXB3-204ENST00000513318 POF1BQ8WVV4 589 aa8.14□□□□□ -1.11
HMGXB3-204ENST00000513318 FAXDC2Q96IV6 333 aa8.14□□□□□ -1.11
HMGXB3-204ENST00000513318 VN1R3Q9BXE9 311 aa8.14□□□□□ -1.11
HMGXB3-204ENST00000513318 ZBP1Q9H171 429 aa8.14□□□□□ -1.11
HMGXB3-204ENST00000513318 XYLT2Q9H1B5 865 aa8.14□□□□□ -1.11
HMGXB3-204ENST00000513318 VPS16Q9H269 839 aa8.14□□□□□ -1.11
HMGXB3-204ENST00000513318 TTYH1Q9H313 450 aaPredicted RBP8.14□□□□□ -1.11
HMGXB3-204ENST00000513318 ALG13Q9NP73 1137 aaKnown RBP8.14□□□□□ -1.11
HMGXB3-204ENST00000513318 TLR9Q9NR96 1032 aa8.14□□□□□ -1.11
HMGXB3-204ENST00000513318 DSEQ9UL01 958 aa8.14□□□□□ -1.11
HMGXB3-204ENST00000513318 SSX2IPQ9Y2D8 614 aa8.14□□□□□ -1.11
HMGXB3-204ENST00000513318 SNX9Q9Y5X1 595 aa8.14□□□□□ -1.11
HMGXB3-204ENST00000513318 EPOPA6NHQ4 379 aa8.13□□□□□ -1.11
HMGXB3-204ENST00000513318 LGALS16A8MUM7 142 aa8.13□□□□□ -1.11
HMGXB3-204ENST00000513318 CYB561D2O14569 222 aa8.13□□□□□ -1.11
HMGXB3-204ENST00000513318 GRM6O15303 877 aa8.13□□□□□ -1.11
HMGXB3-204ENST00000513318 HUS1O60921 280 aa8.13□□□□□ -1.11
HMGXB3-204ENST00000513318 SERPINC1P01008 464 aa8.13□□□□□ -1.11
HMGXB3-204ENST00000513318 CYP11A1P05108 521 aa8.13□□□□□ -1.11
HMGXB3-204ENST00000513318 CTSAP10619 480 aa8.13□□□□□ -1.11
HMGXB3-204ENST00000513318 FGFR3P22607 806 aa8.13□□□□□ -1.11
HMGXB3-204ENST00000513318 IGFBP6P24592 240 aaPredicted RBP8.13□□□□□ -1.11
HMGXB3-204ENST00000513318 TKTP29401 623 aaKnown RBP8.13□□□□□ -1.11
HMGXB3-204ENST00000513318 DSG1Q02413 1049 aa8.13□□□□□ -1.11
HMGXB3-204ENST00000513318 CREMQ03060 361 aa8.13□□□□□ -1.11
HMGXB3-204ENST00000513318 YWHAHQ04917 246 aaPredicted RBP8.13□□□□□ -1.11
HMGXB3-204ENST00000513318 PTPROQ16827 1216 aa8.13□□□□□ -1.11
HMGXB3-204ENST00000513318 EXOC3L4Q17RC7 722 aa8.13□□□□□ -1.11
HMGXB3-204ENST00000513318 WDR72Q3MJ13 1102 aa8.13□□□□□ -1.11
HMGXB3-204ENST00000513318 FILIP1LQ4L180 1135 aa8.13□□□□□ -1.11
HMGXB3-204ENST00000513318 SCARA3Q6AZY7 606 aa8.13□□□□□ -1.11
HMGXB3-204ENST00000513318 KIAA1841Q6NSI8 718 aa8.13□□□□□ -1.11
HMGXB3-204ENST00000513318 PDXDC1Q6P996 788 aa8.13□□□□□ -1.11
HMGXB3-204ENST00000513318 TRIM65Q6PJ69 517 aa8.13□□□□□ -1.11
HMGXB3-204ENST00000513318 ANKS3Q6ZW76 656 aa8.13□□□□□ -1.11
HMGXB3-204ENST00000513318 GAS2L3Q86XJ1 694 aa8.13□□□□□ -1.11
HMGXB3-204ENST00000513318 TOP6BLQ8N6T0 577 aa8.13□□□□□ -1.11
HMGXB3-204ENST00000513318 PIK3R5Q8WYR1 880 aa8.13□□□□□ -1.11
HMGXB3-204ENST00000513318 SEMA4DQ92854 862 aa8.13□□□□□ -1.11
HMGXB3-204ENST00000513318 NT5C1BQ96P26 610 aa8.13□□□□□ -1.11
HMGXB3-204ENST00000513318 TCF25Q9BQ70 676 aa8.13□□□□□ -1.11
HMGXB3-204ENST00000513318 PI4K2AQ9BTU6 479 aa8.13□□□□□ -1.11
HMGXB3-204ENST00000513318 TTPALQ9BTX7 342 aa8.13□□□□□ -1.11
HMGXB3-204ENST00000513318 TMUB1Q9BVT8 246 aa8.13□□□□□ -1.11
HMGXB3-204ENST00000513318 REPIN1Q9BWE0 567 aaKnown RBP8.13□□□□□ -1.11
HMGXB3-204ENST00000513318 OXCT2Q9BYC2 517 aaPredicted RBP8.13□□□□□ -1.11
HMGXB3-204ENST00000513318 NIF3L1Q9GZT8 377 aa8.13□□□□□ -1.11
HMGXB3-204ENST00000513318 FAM124BQ9H5Z6 455 aaPredicted RBP8.13□□□□□ -1.11
HMGXB3-204ENST00000513318 NGRNQ9NPE2 291 aaKnown RBP8.13□□□□□ -1.11
HMGXB3-204ENST00000513318 ENTPD7Q9NQZ7 604 aa8.13□□□□□ -1.11
HMGXB3-204ENST00000513318 CHST7Q9NS84 486 aa8.13□□□□□ -1.11
HMGXB3-204ENST00000513318 IRAK3Q9Y616 596 aa8.13□□□□□ -1.11
HMGXB3-204ENST00000513318 DENND4AQ7Z401 1863 aa8.13□□□□□ -1.11
HMGXB3-204ENST00000513318 A0A1B0GTH6 734 aa8.12□□□□□ -1.11
HMGXB3-204ENST00000513318 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.12□□□□□ -1.11
HMGXB3-204ENST00000513318 H7C4K7 107 aa8.12□□□□□ -1.11
HMGXB3-204ENST00000513318 I3L4J1 428 aa8.12□□□□□ -1.11
HMGXB3-204ENST00000513318 FSCN2O14926 492 aa8.12□□□□□ -1.11
HMGXB3-204ENST00000513318 LPXNO60711 386 aa8.12□□□□□ -1.11
HMGXB3-204ENST00000513318 TACC1O75410 805 aa8.12□□□□□ -1.11
HMGXB3-204ENST00000513318 TPM3P06753 285 aa8.12□□□□□ -1.11
HMGXB3-204ENST00000513318 FAM163BP0C2L3 166 aa8.12□□□□□ -1.11
HMGXB3-204ENST00000513318 RFX1P22670 979 aa8.12□□□□□ -1.11
HMGXB3-204ENST00000513318 TBXAS1P24557 533 aaPredicted RBP8.12□□□□□ -1.11
HMGXB3-204ENST00000513318 ASPAP45381 313 aa8.12□□□□□ -1.11
HMGXB3-204ENST00000513318 FXR1P51114 621 aaKnown RBP eCLIP8.12□□□□□ -1.11
HMGXB3-204ENST00000513318 FANCCQ00597 558 aa8.12□□□□□ -1.11
HMGXB3-204ENST00000513318 CAMK1Q14012 370 aa8.12□□□□□ -1.11
HMGXB3-204ENST00000513318 SMC1AQ14683 1233 aaKnown RBP8.12□□□□□ -1.11
HMGXB3-204ENST00000513318 PTPN14Q15678 1187 aa8.12□□□□□ -1.11
HMGXB3-204ENST00000513318 PSMD5Q16401 504 aa8.12□□□□□ -1.11
HMGXB3-204ENST00000513318 RTP2Q5QGT7 225 aa8.12□□□□□ -1.11
HMGXB3-204ENST00000513318 OVOS1Q6IE37 1185 aa8.12□□□□□ -1.11
HMGXB3-204ENST00000513318 SPOPLQ6IQ16 392 aa8.12□□□□□ -1.11
HMGXB3-204ENST00000513318 ZNF280DQ6N043 979 aa8.12□□□□□ -1.11
HMGXB3-204ENST00000513318 SCARA5Q6ZMJ2 495 aa8.12□□□□□ -1.11
HMGXB3-204ENST00000513318 TMC7Q7Z402 723 aa8.12□□□□□ -1.11
HMGXB3-204ENST00000513318 LIMS2Q7Z4I7 341 aa8.12□□□□□ -1.11
HMGXB3-204ENST00000513318 METTL23Q86XA0 190 aa8.12□□□□□ -1.11
HMGXB3-204ENST00000513318 CEP57Q86XR8 500 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms