RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 STAT1P42224 750 aa13.39□□□□□ -0.27
PDPN-210ENST00000513143 ADKP55263 362 aaKnown RBP13.39□□□□□ -0.27
PDPN-210ENST00000513143 CCDC173Q0VFZ6 552 aa13.39□□□□□ -0.27
PDPN-210ENST00000513143 WSCD1Q658N2 575 aa13.39□□□□□ -0.27
PDPN-210ENST00000513143 CNGA4Q8IV77 575 aa13.39□□□□□ -0.27
PDPN-210ENST00000513143 FAM71AQ8IYT1 594 aa13.39□□□□□ -0.27
PDPN-210ENST00000513143 RNF168Q8IYW5 571 aaPredicted RBP13.39□□□□□ -0.27
PDPN-210ENST00000513143 TMEM86AQ8N2M4 240 aa13.39□□□□□ -0.27
PDPN-210ENST00000513143 TC2NQ8N9U0 490 aa13.39□□□□□ -0.27
PDPN-210ENST00000513143 OR8K1Q8NGG5 319 aa13.39□□□□□ -0.27
PDPN-210ENST00000513143 KBTBD7Q8WVZ9 684 aa13.39□□□□□ -0.27
PDPN-210ENST00000513143 SYN2Q92777 582 aaPredicted RBP13.39□□□□□ -0.27
PDPN-210ENST00000513143 PPP1R9BQ96SB3 815 aa13.39□□□□□ -0.27
PDPN-210ENST00000513143 DNAJC7Q99615 494 aa13.39□□□□□ -0.27
PDPN-210ENST00000513143 MRPL45Q9BRJ2 306 aaKnown RBP13.39□□□□□ -0.27
PDPN-210ENST00000513143 NUCKS1Q9H1E3 243 aaKnown RBP13.39□□□□□ -0.27
PDPN-210ENST00000513143 AIPL1Q9NZN9 384 aa13.39□□□□□ -0.27
PDPN-210ENST00000513143 DSEQ9UL01 958 aa13.39□□□□□ -0.27
PDPN-210ENST00000513143 BARX2Q9UMQ3 279 aaPredicted RBP13.39□□□□□ -0.27
PDPN-210ENST00000513143 RWDD3Q9Y3V2 267 aa13.39□□□□□ -0.27
PDPN-210ENST00000513143 PLXNA4Q9HCM2 1894 aa13.39□□□□□ -0.27
PDPN-210ENST00000513143 GABRDO14764 452 aa13.39□□□□□ -0.27
PDPN-210ENST00000513143 CD58P19256 250 aa13.39□□□□□ -0.27
PDPN-210ENST00000513143 FGFR3P22607 806 aa13.39□□□□□ -0.27
PDPN-210ENST00000513143 HNRNPH3P31942 346 aaKnown RBP13.39□□□□□ -0.27
PDPN-210ENST00000513143 BMPR1AP36894 532 aa13.39□□□□□ -0.27
PDPN-210ENST00000513143 LHX1P48742 406 aa13.39□□□□□ -0.27
PDPN-210ENST00000513143 ZNF132P52740 706 aa13.39□□□□□ -0.27
PDPN-210ENST00000513143 GSDMDP57764 484 aa13.39□□□□□ -0.27
PDPN-210ENST00000513143 GOLGA8FQ08AF8 430 aa13.39□□□□□ -0.27
PDPN-210ENST00000513143 GOLGA8DPQ0D2H9 430 aa13.39□□□□□ -0.27
PDPN-210ENST00000513143 SFMBT2Q5VUG0 894 aa13.39□□□□□ -0.27
PDPN-210ENST00000513143 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.39□□□□□ -0.27
PDPN-210ENST00000513143 UNC93AQ86WB7 457 aa13.39□□□□□ -0.27
PDPN-210ENST00000513143 FMNL3Q8IVF7 1028 aa13.39□□□□□ -0.27
PDPN-210ENST00000513143 ADGRF2Q8IZF7 708 aa13.39□□□□□ -0.27
PDPN-210ENST00000513143 WHAMMQ8TF30 809 aa13.39□□□□□ -0.27
PDPN-210ENST00000513143 TMEM169Q96HH4 297 aa13.39□□□□□ -0.27
PDPN-210ENST00000513143 PLVAPQ9BX97 442 aa13.39□□□□□ -0.27
PDPN-210ENST00000513143 VN1R3Q9BXE9 311 aa13.39□□□□□ -0.27
PDPN-210ENST00000513143 ABHD10Q9NUJ1 306 aa13.39□□□□□ -0.27
PDPN-210ENST00000513143 YBX2Q9Y2T7 364 aaKnown RBP13.39□□□□□ -0.27
PDPN-210ENST00000513143 PCDHB4Q9Y5E5 795 aa13.39□□□□□ -0.27
PDPN-210ENST00000513143 TIMM13Q9Y5L4 95 aaPredicted RBP13.39□□□□□ -0.27
PDPN-210ENST00000513143 C5orf67F2Z3F1 127 aa13.38□□□□□ -0.27
PDPN-210ENST00000513143 FGF18O76093 207 aa13.38□□□□□ -0.27
PDPN-210ENST00000513143 ARHGEF15O94989 841 aa13.38□□□□□ -0.27
PDPN-210ENST00000513143 OAZ2O95190 189 aa13.38□□□□□ -0.27
PDPN-210ENST00000513143 CA3P07451 260 aa13.38□□□□□ -0.27
PDPN-210ENST00000513143 PNMA6AP0CW24 399 aaPredicted RBP13.38□□□□□ -0.27
PDPN-210ENST00000513143 KRT5P13647 590 aa13.38□□□□□ -0.27
PDPN-210ENST00000513143 TKTP29401 623 aaKnown RBP13.38□□□□□ -0.27
PDPN-210ENST00000513143 CLCN1P35523 988 aa13.38□□□□□ -0.27
PDPN-210ENST00000513143 GNL1P36915 607 aaPredicted RBP13.38□□□□□ -0.27
PDPN-210ENST00000513143 PBX2P40425 430 aa13.38□□□□□ -0.27
PDPN-210ENST00000513143 NDST1P52848 882 aa13.38□□□□□ -0.27
PDPN-210ENST00000513143 PLCB3Q01970 1234 aa13.38□□□□□ -0.27
PDPN-210ENST00000513143 RAB30Q15771 203 aa13.38□□□□□ -0.27
PDPN-210ENST00000513143 FAM171A1Q5VUB5 890 aa13.38□□□□□ -0.27
PDPN-210ENST00000513143 E4F1Q66K89 784 aaPredicted RBP13.38□□□□□ -0.27
PDPN-210ENST00000513143 TMEM270Q6UE05 265 aa13.38□□□□□ -0.27
PDPN-210ENST00000513143 TAS1R1Q7RTX1 841 aa13.38□□□□□ -0.27
PDPN-210ENST00000513143 CCDC186Q7Z3E2 898 aa13.38□□□□□ -0.27
PDPN-210ENST00000513143 IRF2BP2Q7Z5L9 587 aa13.38□□□□□ -0.27
PDPN-210ENST00000513143 DDX53Q86TM3 631 aaKnown RBP13.38□□□□□ -0.27
PDPN-210ENST00000513143 OSTM1Q86WC4 334 aa13.38□□□□□ -0.27
PDPN-210ENST00000513143 METTL23Q86XA0 190 aa13.38□□□□□ -0.27
PDPN-210ENST00000513143 OR6B3Q8NGW1 331 aa13.38□□□□□ -0.27
PDPN-210ENST00000513143 PANX2Q96RD6 677 aa13.38□□□□□ -0.27
PDPN-210ENST00000513143 PBX4Q9BYU1 374 aa13.38□□□□□ -0.27
PDPN-210ENST00000513143 SNX25Q9H3E2 840 aa13.38□□□□□ -0.27
PDPN-210ENST00000513143 STK39Q9UEW8 545 aa13.38□□□□□ -0.27
PDPN-210ENST00000513143 MSRAQ9UJ68 235 aa13.38□□□□□ -0.27
PDPN-210ENST00000513143 STXBP5LQ9Y2K9 1186 aa13.38□□□□□ -0.27
PDPN-210ENST00000513143 NME7Q9Y5B8 376 aa13.38□□□□□ -0.27
PDPN-210ENST00000513143 A8MXQ7 604 aa13.37□□□□□ -0.27
PDPN-210ENST00000513143 CYP26A1O43174 497 aa13.37□□□□□ -0.27
PDPN-210ENST00000513143 GFPT2O94808 682 aa13.37□□□□□ -0.27
PDPN-210ENST00000513143 SOD2P04179 222 aa13.37□□□□□ -0.27
PDPN-210ENST00000513143 CCDC172P0C7W6 258 aa13.37□□□□□ -0.27
PDPN-210ENST00000513143 FERP16591 822 aa13.37□□□□□ -0.27
PDPN-210ENST00000513143 LMO2P25791 158 aa13.37□□□□□ -0.27
PDPN-210ENST00000513143 CTNNB1P35222 781 aa13.37□□□□□ -0.27
PDPN-210ENST00000513143 USP8P40818 1118 aa13.37□□□□□ -0.27
PDPN-210ENST00000513143 RAD23BP54727 409 aa13.37□□□□□ -0.27
PDPN-210ENST00000513143 ERVK-21P61565 698 aa13.37□□□□□ -0.27
PDPN-210ENST00000513143 TAP1Q03518 808 aa13.37□□□□□ -0.27
PDPN-210ENST00000513143 KRT17Q04695 432 aa13.37□□□□□ -0.27
PDPN-210ENST00000513143 YWHAHQ04917 246 aaPredicted RBP13.37□□□□□ -0.27
PDPN-210ENST00000513143 MRPL58Q14197 206 aaKnown RBP13.37□□□□□ -0.27
PDPN-210ENST00000513143 TSR1Q2NL82 804 aaKnown RBP13.37□□□□□ -0.27
PDPN-210ENST00000513143 USP41Q3LFD5 358 aa13.37□□□□□ -0.27
PDPN-210ENST00000513143 OVOS1Q6IE37 1185 aa13.37□□□□□ -0.27
PDPN-210ENST00000513143 KLHL23Q8NBE8 558 aa13.37□□□□□ -0.27
PDPN-210ENST00000513143 RBBP8NLQ8NC74 664 aaPredicted RBP13.37□□□□□ -0.27
PDPN-210ENST00000513143 SAMD11Q96NU1 681 aa13.37□□□□□ -0.27
PDPN-210ENST00000513143 TWNKQ96RR1 684 aa13.37□□□□□ -0.27
PDPN-210ENST00000513143 TGS1Q96RS0 853 aaKnown RBP13.37□□□□□ -0.27
PDPN-210ENST00000513143 RTP3Q9BQQ7 232 aa13.37□□□□□ -0.27
PDPN-210ENST00000513143 C17orf80Q9BSJ5 609 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms