RNA–Protein interactions for RNA: ENST00000512985.1

CDK7-209, Transcript of cyclin dependent kinase 7, humanhuman

TSL 2

Gene CDK7, Length 261 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-209ENST00000512985 TIMM13Q9Y5L4 95 aaPredicted RBP13.7□□□□□ -0.22
CDK7-209ENST00000512985 PRRG1O14668 218 aa13.69□□□□□ -0.22
CDK7-209ENST00000512985 TBC1D4O60343 1298 aa13.69□□□□□ -0.22
CDK7-209ENST00000512985 CST3P01034 146 aaPredicted RBP13.69□□□□□ -0.22
CDK7-209ENST00000512985 TPM2P07951 284 aa13.69□□□□□ -0.22
CDK7-209ENST00000512985 ATF2P15336 505 aa13.69□□□□□ -0.22
CDK7-209ENST00000512985 IGFBP6P24592 240 aaPredicted RBP13.69□□□□□ -0.22
CDK7-209ENST00000512985 HOXA9P31269 272 aa13.69□□□□□ -0.22
CDK7-209ENST00000512985 LTBRP36941 435 aa13.69□□□□□ -0.22
CDK7-209ENST00000512985 GCLMP48507 274 aa13.69□□□□□ -0.22
CDK7-209ENST00000512985 MYL6P60660 151 aa13.69□□□□□ -0.22
CDK7-209ENST00000512985 ROR1Q01973 937 aa13.69□□□□□ -0.22
CDK7-209ENST00000512985 PLD1Q13393 1074 aa13.69□□□□□ -0.22
CDK7-209ENST00000512985 MAPRE1Q15691 268 aaKnown RBP13.69□□□□□ -0.22
CDK7-209ENST00000512985 NFE2Q16621 373 aaPredicted RBP13.69□□□□□ -0.22
CDK7-209ENST00000512985 DPCR1Q3MIW9 517 aa13.69□□□□□ -0.22
CDK7-209ENST00000512985 PPM1LQ5SGD2 360 aa13.69□□□□□ -0.22
CDK7-209ENST00000512985 ATAT1Q5SQI0 421 aa13.69□□□□□ -0.22
CDK7-209ENST00000512985 WSCD1Q658N2 575 aa13.69□□□□□ -0.22
CDK7-209ENST00000512985 PTCRAQ6ISU1 281 aaPredicted RBP13.69□□□□□ -0.22
CDK7-209ENST00000512985 LILRA6Q6PI73 481 aa13.69□□□□□ -0.22
CDK7-209ENST00000512985 ELMOD1Q8N336 334 aa13.69□□□□□ -0.22
CDK7-209ENST00000512985 PDCL2Q8N4E4 241 aa13.69□□□□□ -0.22
CDK7-209ENST00000512985 TTC39CQ8N584 583 aa13.69□□□□□ -0.22
CDK7-209ENST00000512985 FBXL13Q8NEE6 735 aa13.69□□□□□ -0.22
CDK7-209ENST00000512985 PLEKHO2Q8TD55 490 aa13.69□□□□□ -0.22
CDK7-209ENST00000512985 ACBD6Q9BR61 282 aa13.69□□□□□ -0.22
CDK7-209ENST00000512985 RHOBTB2Q9BYZ6 727 aa13.69□□□□□ -0.22
CDK7-209ENST00000512985 GZF1Q9H116 711 aaPredicted RBP13.69□□□□□ -0.22
CDK7-209ENST00000512985 ADAM7Q9H2U9 754 aa13.69□□□□□ -0.22
CDK7-209ENST00000512985 THAP9Q9H5L6 903 aa13.69□□□□□ -0.22
CDK7-209ENST00000512985 PIDD1Q9HB75 910 aa13.69□□□□□ -0.22
CDK7-209ENST00000512985 DDX43Q9NXZ2 648 aaKnown RBP13.69□□□□□ -0.22
CDK7-209ENST00000512985 CLEC1BQ9P126 229 aa13.69□□□□□ -0.22
CDK7-209ENST00000512985 HSFX1Q9UBD0 423 aa13.69□□□□□ -0.22
CDK7-209ENST00000512985 NXF1Q9UBU9 619 aaKnown RBP13.69□□□□□ -0.22
CDK7-209ENST00000512985 FBXW11Q9UKB1 542 aa13.69□□□□□ -0.22
CDK7-209ENST00000512985 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.69□□□□□ -0.22
CDK7-209ENST00000512985 P4HA2O15460 535 aa13.68□□□□□ -0.22
CDK7-209ENST00000512985 TACC1O75410 805 aa13.68□□□□□ -0.22
CDK7-209ENST00000512985 ZMYND10O75800 440 aa13.68□□□□□ -0.22
CDK7-209ENST00000512985 ABLIM3O94929 683 aa13.68□□□□□ -0.22
CDK7-209ENST00000512985 HLA-DRAP01903 254 aa13.68□□□□□ -0.22
CDK7-209ENST00000512985 LRG1P02750 347 aa13.68□□□□□ -0.22
CDK7-209ENST00000512985 MARSP56192 900 aaKnown RBP13.68□□□□□ -0.22
CDK7-209ENST00000512985 TFF2Q03403 129 aa13.68□□□□□ -0.22
CDK7-209ENST00000512985 GPR17Q13304 367 aa13.68□□□□□ -0.22
CDK7-209ENST00000512985 CLUL1Q15846 466 aa13.68□□□□□ -0.22
CDK7-209ENST00000512985 RARS2Q5T160 578 aaKnown RBP13.68□□□□□ -0.22
CDK7-209ENST00000512985 CREBRFQ8IUR6 639 aa13.68□□□□□ -0.22
CDK7-209ENST00000512985 VN1R2Q8NFZ6 395 aa13.68□□□□□ -0.22
CDK7-209ENST00000512985 FAM124BQ9H5Z6 455 aaPredicted RBP13.68□□□□□ -0.22
CDK7-209ENST00000512985 CYP4F11Q9HBI6 524 aa13.68□□□□□ -0.22
CDK7-209ENST00000512985 PRDM6Q9NQX0 595 aa13.68□□□□□ -0.22
CDK7-209ENST00000512985 RAB20Q9NX57 234 aa13.68□□□□□ -0.22
CDK7-209ENST00000512985 L1RE1Q9UN81 338 aa13.68□□□□□ -0.22
CDK7-209ENST00000512985 CCDC195A0A1B0GUA6 201 aa13.67□□□□□ -0.22
CDK7-209ENST00000512985 WDR27A2RRH5 827 aa13.67□□□□□ -0.22
CDK7-209ENST00000512985 GRXCR2A6NFK2 248 aa13.67□□□□□ -0.22
CDK7-209ENST00000512985 PMM2O15305 246 aa13.67□□□□□ -0.22
CDK7-209ENST00000512985 MBTPS2O43462 519 aa13.67□□□□□ -0.22
CDK7-209ENST00000512985 C8AP07357 584 aa13.67□□□□□ -0.22
CDK7-209ENST00000512985 POU2F2P09086 479 aa13.67□□□□□ -0.22
CDK7-209ENST00000512985 WARSP23381 471 aaKnown RBP13.67□□□□□ -0.22
CDK7-209ENST00000512985 GNL1P36915 607 aaPredicted RBP13.67□□□□□ -0.22
CDK7-209ENST00000512985 ALDH1A3P47895 512 aa13.67□□□□□ -0.22
CDK7-209ENST00000512985 TUFMP49411 452 aaKnown RBP13.67□□□□□ -0.22
CDK7-209ENST00000512985 YWHAEP62258 255 aaKnown RBP13.67□□□□□ -0.22
CDK7-209ENST00000512985 DLX2Q07687 328 aaPredicted RBP13.67□□□□□ -0.22
CDK7-209ENST00000512985 PPP3CAQ08209 521 aa13.67□□□□□ -0.22
CDK7-209ENST00000512985 ADCY1Q08828 1119 aa13.67□□□□□ -0.22
CDK7-209ENST00000512985 SOWAHAQ2M3V2 549 aa13.67□□□□□ -0.22
CDK7-209ENST00000512985 TCEAL8Q8IYN2 117 aa13.67□□□□□ -0.22
CDK7-209ENST00000512985 TMEM130Q8N3G9 435 aa13.67□□□□□ -0.22
CDK7-209ENST00000512985 ANKRD20A12PQ8NF67 263 aa13.67□□□□□ -0.22
CDK7-209ENST00000512985 OR6B3Q8NGW1 331 aa13.67□□□□□ -0.22
CDK7-209ENST00000512985 SLC7A14Q8TBB6 771 aa13.67□□□□□ -0.22
CDK7-209ENST00000512985 ENOX1Q8TC92 643 aaKnown RBP13.67□□□□□ -0.22
CDK7-209ENST00000512985 SPPL2BQ8TCT7 592 aa13.67□□□□□ -0.22
CDK7-209ENST00000512985 SLC35C1Q96A29 364 aa13.67□□□□□ -0.22
CDK7-209ENST00000512985 TNIP3Q96KP6 325 aa13.67□□□□□ -0.22
CDK7-209ENST00000512985 ZCWPW1Q9H0M4 648 aa13.67□□□□□ -0.22
CDK7-209ENST00000512985 XYLT2Q9H1B5 865 aa13.67□□□□□ -0.22
CDK7-209ENST00000512985 PRKAG3Q9UGI9 489 aa13.67□□□□□ -0.22
CDK7-209ENST00000512985 CDH9Q9ULB4 789 aa13.67□□□□□ -0.22
CDK7-209ENST00000512985 COL6A3P12111 3177 aa13.67□□□□□ -0.22
CDK7-209ENST00000512985 VWA8A3KMH1 1905 aa13.66□□□□□ -0.22
CDK7-209ENST00000512985 GABRDO14764 452 aa13.66□□□□□ -0.22
CDK7-209ENST00000512985 ADAM12O43184 909 aa13.66□□□□□ -0.22
CDK7-209ENST00000512985 VNN1O95497 513 aa13.66□□□□□ -0.22
CDK7-209ENST00000512985 ASS1P00966 412 aaKnown RBP13.66□□□□□ -0.22
CDK7-209ENST00000512985 AFPP02771 609 aaKnown RBP13.66□□□□□ -0.22
CDK7-209ENST00000512985 SPATA31D3P0C874 917 aa13.66□□□□□ -0.22
CDK7-209ENST00000512985 MTIF2P46199 727 aaKnown RBP13.66□□□□□ -0.22
CDK7-209ENST00000512985 FMO5P49326 533 aa13.66□□□□□ -0.22
CDK7-209ENST00000512985 NOP14P78316 857 aaKnown RBP13.66□□□□□ -0.22
CDK7-209ENST00000512985 RBM10P98175 930 aaKnown RBP13.66□□□□□ -0.22
CDK7-209ENST00000512985 SMAD2Q15796 467 aaKnown RBP13.66□□□□□ -0.22
CDK7-209ENST00000512985 SLC39A12Q504Y0 691 aa13.66□□□□□ -0.22
CDK7-209ENST00000512985 C1orf220Q5T0J3 134 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms