RNA–Protein interactions for RNA: ENST00000512462.5

PRDM16-207, Transcript of PR/SET domain 16, humanhuman

TSL 1 (best)

Gene PRDM16, Length 3,723 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-207ENST00000512462 SLC24A3Q9HC58 644 aa12.59□□□□□ -0.39
PRDM16-207ENST00000512462 RAB6BQ9NRW1 208 aa12.59□□□□□ -0.39
PRDM16-207ENST00000512462 ZNF541Q9H0D2 1346 aa12.59□□□□□ -0.39
PRDM16-207ENST00000512462 SPDYE16A6NNV3 312 aaPredicted RBP12.59□□□□□ -0.39
PRDM16-207ENST00000512462 TOM1L1O75674 476 aa12.59□□□□□ -0.39
PRDM16-207ENST00000512462 AKAP5P24588 427 aa12.59□□□□□ -0.39
PRDM16-207ENST00000512462 FMO1Q01740 532 aa12.59□□□□□ -0.39
PRDM16-207ENST00000512462 KCNV2Q8TDN2 545 aa12.59□□□□□ -0.39
PRDM16-207ENST00000512462 CLEC4DQ8WXI8 215 aa12.59□□□□□ -0.39
PRDM16-207ENST00000512462 ACAP3Q96P50 834 aa12.59□□□□□ -0.39
PRDM16-207ENST00000512462 OSMRQ99650 979 aa12.59□□□□□ -0.39
PRDM16-207ENST00000512462 MTFR1LQ9H019 292 aa12.59□□□□□ -0.39
PRDM16-207ENST00000512462 SETD4Q9NVD3 440 aa12.59□□□□□ -0.39
PRDM16-207ENST00000512462 TIMM13Q9Y5L4 95 aaPredicted RBP12.59□□□□□ -0.39
PRDM16-207ENST00000512462 DLEC1Q9Y238 1755 aa12.58□□□□□ -0.4
PRDM16-207ENST00000512462 KCNN4O15554 427 aa12.58□□□□□ -0.4
PRDM16-207ENST00000512462 ALDH5A1P51649 535 aaPredicted RBP12.58□□□□□ -0.4
PRDM16-207ENST00000512462 ZNF844Q08AG5 666 aa12.58□□□□□ -0.4
PRDM16-207ENST00000512462 TAF12Q16514 161 aa12.58□□□□□ -0.4
PRDM16-207ENST00000512462 SIX6OS1Q8N1H7 587 aa12.58□□□□□ -0.4
PRDM16-207ENST00000512462 HIPK4Q8NE63 616 aa12.58□□□□□ -0.4
PRDM16-207ENST00000512462 SPATA18Q8TC71 538 aa12.58□□□□□ -0.4
PRDM16-207ENST00000512462 EPN3Q9H201 632 aa12.58□□□□□ -0.4
PRDM16-207ENST00000512462 PCDHA2Q9Y5H9 948 aa12.58□□□□□ -0.4
PRDM16-207ENST00000512462 OVGP1Q12889 678 aa12.58□□□□□ -0.4
PRDM16-207ENST00000512462 DNAJC3Q13217 504 aa12.58□□□□□ -0.4
PRDM16-207ENST00000512462 PLCB4Q15147 1175 aa12.58□□□□□ -0.4
PRDM16-207ENST00000512462 TDRD10Q5VZ19 366 aaKnown RBP12.58□□□□□ -0.4
PRDM16-207ENST00000512462 EEF1DP3Q658K8 133 aa12.58□□□□□ -0.4
PRDM16-207ENST00000512462 IL31Q6EBC2 164 aa12.58□□□□□ -0.4
PRDM16-207ENST00000512462 DSTYKQ6XUX3 929 aa12.58□□□□□ -0.4
PRDM16-207ENST00000512462 MAP4K3Q8IVH8 894 aa12.58□□□□□ -0.4
PRDM16-207ENST00000512462 MCOLN2Q8IZK6 566 aa12.58□□□□□ -0.4
PRDM16-207ENST00000512462 MYCBPAPQ8TBZ2 947 aa12.58□□□□□ -0.4
PRDM16-207ENST00000512462 HASPINQ8TF76 798 aa12.58□□□□□ -0.4
PRDM16-207ENST00000512462 RAPGEF5Q92565 580 aa12.58□□□□□ -0.4
PRDM16-207ENST00000512462 HVCN1Q96D96 273 aa12.58□□□□□ -0.4
PRDM16-207ENST00000512462 CDCA5Q96FF9 252 aa12.58□□□□□ -0.4
PRDM16-207ENST00000512462 HPDLQ96IR7 371 aa12.58□□□□□ -0.4
PRDM16-207ENST00000512462 PPP1R36Q96LQ0 422 aa12.58□□□□□ -0.4
PRDM16-207ENST00000512462 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.58□□□□□ -0.46e-6■□□□□ 10.5
PRDM16-207ENST00000512462 HAUS2Q9NVX0 235 aa12.58□□□□□ -0.4
PRDM16-207ENST00000512462 LAMB1P07942 1786 aa12.58□□□□□ -0.4
PRDM16-207ENST00000512462 CCDC88AQ3V6T2 1871 aa12.58□□□□□ -0.4
PRDM16-207ENST00000512462 GTPBP10A4D1E9 387 aaKnown RBP12.58□□□□□ -0.4
PRDM16-207ENST00000512462 I3L4J1 428 aa12.58□□□□□ -0.4
PRDM16-207ENST00000512462 FDX1P10109 184 aa12.58□□□□□ -0.4
PRDM16-207ENST00000512462 EFNA5P52803 228 aa12.58□□□□□ -0.4
PRDM16-207ENST00000512462 LMNB2Q03252 620 aa12.58□□□□□ -0.4
PRDM16-207ENST00000512462 TMEM132DQ14C87 1099 aa12.58□□□□□ -0.4
PRDM16-207ENST00000512462 PSMD6Q15008 389 aa12.58□□□□□ -0.4
PRDM16-207ENST00000512462 PTGISQ16647 500 aa12.58□□□□□ -0.4
PRDM16-207ENST00000512462 SGSM1Q2NKQ1 1148 aa12.58□□□□□ -0.4
PRDM16-207ENST00000512462 MFSD7Q6UXD7 560 aa12.58□□□□□ -0.4
PRDM16-207ENST00000512462 LRRC34Q8IZ02 419 aa12.58□□□□□ -0.4
PRDM16-207ENST00000512462 FAM81BQ96LP2 452 aa12.58□□□□□ -0.4
PRDM16-207ENST00000512462 SPON1Q9HCB6 807 aa12.58□□□□□ -0.4
PRDM16-207ENST00000512462 OGTO15294 1046 aa12.57□□□□□ -0.4
PRDM16-207ENST00000512462 RPS12P25398 132 aaKnown RBP12.57□□□□□ -0.4
PRDM16-207ENST00000512462 CALRP27797 417 aaKnown RBP12.57□□□□□ -0.4
PRDM16-207ENST00000512462 ADCYAP1R1P41586 468 aa12.57□□□□□ -0.4
PRDM16-207ENST00000512462 PTGER2P43116 358 aa12.57□□□□□ -0.4
PRDM16-207ENST00000512462 MAGEA9P43362 315 aa12.57□□□□□ -0.4
PRDM16-207ENST00000512462 TMC3Q7Z5M5 1100 aa12.57□□□□□ -0.4
PRDM16-207ENST00000512462 SCN4BQ8IWT1 228 aa12.57□□□□□ -0.4
PRDM16-207ENST00000512462 ANKRD13AQ8IZ07 590 aa12.57□□□□□ -0.4
PRDM16-207ENST00000512462 PABPC3Q9H361 631 aaKnown RBP12.57□□□□□ -0.4
PRDM16-207ENST00000512462 SMARCAD1Q9H4L7 1026 aa12.57□□□□□ -0.4
PRDM16-207ENST00000512462 CPA4Q9UI42 421 aa12.57□□□□□ -0.4
PRDM16-207ENST00000512462 CST3P01034 146 aaPredicted RBP12.57□□□□□ -0.4
PRDM16-207ENST00000512462 TROVE2P10155 538 aaKnown RBP eCLIP12.57□□□□□ -0.4
PRDM16-207ENST00000512462 ARL4AP40617 200 aa12.57□□□□□ -0.4
PRDM16-207ENST00000512462 AP1B1Q10567 949 aa12.57□□□□□ -0.4
PRDM16-207ENST00000512462 ENOSF1Q7L5Y1 443 aa12.57□□□□□ -0.4
PRDM16-207ENST00000512462 TMEM130Q8N3G9 435 aa12.57□□□□□ -0.4
PRDM16-207ENST00000512462 PRELID2Q8N945 189 aa12.57□□□□□ -0.4
PRDM16-207ENST00000512462 XPO6Q96QU8 1125 aaKnown RBP12.57□□□□□ -0.4
PRDM16-207ENST00000512462 KIAA1551Q9HCM1 1747 aa12.57□□□□□ -0.4
PRDM16-207ENST00000512462 ABT1Q9ULW3 272 aaKnown RBP12.57□□□□□ -0.4
PRDM16-207ENST00000512462 MYH11P35749 1972 aa12.57□□□□□ -0.4
PRDM16-207ENST00000512462 O00370 1275 aa12.57□□□□□ -0.4
PRDM16-207ENST00000512462 MAFGO15525 162 aa12.57□□□□□ -0.4
PRDM16-207ENST00000512462 ONECUT3O60422 494 aaPredicted RBP12.57□□□□□ -0.4
PRDM16-207ENST00000512462 STK10O94804 968 aaKnown RBP12.57□□□□□ -0.4
PRDM16-207ENST00000512462 PRKCIP41743 596 aa12.57□□□□□ -0.4
PRDM16-207ENST00000512462 HIF1AQ16665 826 aa12.57□□□□□ -0.4
PRDM16-207ENST00000512462 CROCCP2Q86T23 111 aa12.57□□□□□ -0.4
PRDM16-207ENST00000512462 BBOF1Q8ND07 529 aa12.57□□□□□ -0.4
PRDM16-207ENST00000512462 MRIQ9BWK5 157 aa12.57□□□□□ -0.4
PRDM16-207ENST00000512462 SIX2Q9NPC8 291 aa12.57□□□□□ -0.4
PRDM16-207ENST00000512462 ARHGAP42A6NI28 874 aa12.56□□□□□ -0.4
PRDM16-207ENST00000512462 NFKBIEO00221 500 aa12.56□□□□□ -0.4
PRDM16-207ENST00000512462 CFHP08603 1231 aa12.56□□□□□ -0.4
PRDM16-207ENST00000512462 ADSSP30520 456 aa12.56□□□□□ -0.4
PRDM16-207ENST00000512462 PCK1P35558 622 aa12.56□□□□□ -0.4
PRDM16-207ENST00000512462 MAGEA4P43358 317 aa12.56□□□□□ -0.4
PRDM16-207ENST00000512462 PTENP60484 403 aa12.56□□□□□ -0.4
PRDM16-207ENST00000512462 GTF2BQ00403 316 aa12.56□□□□□ -0.4
PRDM16-207ENST00000512462 MXD4Q14582 209 aaPredicted RBP12.56□□□□□ -0.4
PRDM16-207ENST00000512462 CLEC16AQ2KHT3 1053 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms