RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 LDHAL6AQ6ZMR3 332 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 APOBEC3FQ8IUX4 373 aaKnown RBP1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 CCDC83Q8IWF9 413 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 FAM126BQ8IXS8 530 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 DNERQ8NFT8 737 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 XAGE3Q8WTP9 111 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 ARNTL2Q8WYA1 636 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 TRIB2Q92519 343 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 HSPH1Q92598 858 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 KRT35Q92764 455 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 PPP2R3CQ969Q6 453 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 ARHGEF26Q96DR7 871 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 RNPC3Q96LT9 517 aaKnown RBP1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 FAM193BQ96PV7 902 aaPredicted RBP1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 NELL2Q99435 816 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 EIF3CQ99613 913 aaKnown RBP1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 FUZQ9BT04 418 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 LRRC2Q9BYS8 371 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 RAB34Q9BZG1 259 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 DCP1AQ9NPI6 582 aaPredicted RBP1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 PFDN4Q9NQP4 134 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 GMIPQ9P107 970 aa1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 U3KPZ7 1027 aaPredicted RBP1.78□□□□□ -2.12
TRAPPC13-211ENST00000512009 NBEAL2Q6ZNJ1 2754 aa1.78□□□□□ -2.13
TRAPPC13-211ENST00000512009 HECTD1Q9ULT8 2610 aa1.78□□□□□ -2.13
TRAPPC13-211ENST00000512009 GOLGA6BA6NDN3 693 aa1.78□□□□□ -2.13
TRAPPC13-211ENST00000512009 ANKRD65E5RJM6 399 aa1.78□□□□□ -2.13
TRAPPC13-211ENST00000512009 SPECC1L-ADORA2AF8WAN1 911 aa1.78□□□□□ -2.13
TRAPPC13-211ENST00000512009 NDUFS2O75306 463 aa1.78□□□□□ -2.13
TRAPPC13-211ENST00000512009 TBCAO75347 108 aaKnown RBP1.78□□□□□ -2.13
TRAPPC13-211ENST00000512009 SLC5A1P13866 664 aa1.78□□□□□ -2.13
TRAPPC13-211ENST00000512009 ATP2B4P23634 1241 aa1.78□□□□□ -2.13
TRAPPC13-211ENST00000512009 SLC5A2P31639 672 aa1.78□□□□□ -2.13
TRAPPC13-211ENST00000512009 GRIA3P42263 894 aa1.78□□□□□ -2.13
TRAPPC13-211ENST00000512009 RAP1GDS1P52306 607 aa1.78□□□□□ -2.13
TRAPPC13-211ENST00000512009 CTSWP56202 376 aa1.78□□□□□ -2.13
TRAPPC13-211ENST00000512009 GSDMDP57764 484 aa1.78□□□□□ -2.13
TRAPPC13-211ENST00000512009 PPP2R3AQ06190 1150 aa1.78□□□□□ -2.13
TRAPPC13-211ENST00000512009 ZBTB6Q15916 424 aa1.78□□□□□ -2.13
TRAPPC13-211ENST00000512009 ACBD5Q5T8D3 534 aaPredicted RBP1.78□□□□□ -2.13
TRAPPC13-211ENST00000512009 TCERG1LQ5VWI1 586 aa1.78□□□□□ -2.13
TRAPPC13-211ENST00000512009 NAA35Q5VZE5 725 aa1.78□□□□□ -2.13
TRAPPC13-211ENST00000512009 STXBP4Q6ZWJ1 553 aa1.78□□□□□ -2.13
TRAPPC13-211ENST00000512009 COPS6Q7L5N1 327 aa1.78□□□□□ -2.13
TRAPPC13-211ENST00000512009 PRUNE1Q86TP1 453 aa1.78□□□□□ -2.13
TRAPPC13-211ENST00000512009 LSRQ86X29 649 aaPredicted RBP1.78□□□□□ -2.13
TRAPPC13-211ENST00000512009 SPICE1Q8N0Z3 855 aa1.78□□□□□ -2.13
TRAPPC13-211ENST00000512009 FAM133AQ8N9E0 248 aa1.78□□□□□ -2.13
TRAPPC13-211ENST00000512009 PPP1R14CQ8TAE6 165 aa1.78□□□□□ -2.13
TRAPPC13-211ENST00000512009 CLEC4DQ8WXI8 215 aa1.78□□□□□ -2.13
TRAPPC13-211ENST00000512009 SEMA4DQ92854 862 aa1.78□□□□□ -2.13
TRAPPC13-211ENST00000512009 SDF4Q9BRK5 362 aa1.78□□□□□ -2.13
TRAPPC13-211ENST00000512009 HAUS8Q9BT25 410 aa1.78□□□□□ -2.13
TRAPPC13-211ENST00000512009 NACAP1Q9BZK3 213 aa1.78□□□□□ -2.13
TRAPPC13-211ENST00000512009 KIAA1683Q9H0B3 1180 aa1.78□□□□□ -2.13
TRAPPC13-211ENST00000512009 CSRNP2Q9H175 543 aa1.78□□□□□ -2.13
TRAPPC13-211ENST00000512009 TRPV4Q9HBA0 871 aa1.78□□□□□ -2.13
TRAPPC13-211ENST00000512009 VCX3AQ9NNX9 186 aa1.78□□□□□ -2.13
TRAPPC13-211ENST00000512009 PLCB1Q9NQ66 1216 aa1.78□□□□□ -2.13
TRAPPC13-211ENST00000512009 NPDC1Q9NQX5 325 aaPredicted RBP1.78□□□□□ -2.13
TRAPPC13-211ENST00000512009 SEC63Q9UGP8 760 aaKnown RBP1.78□□□□□ -2.13
TRAPPC13-211ENST00000512009 SWAP70Q9UH65 585 aa1.78□□□□□ -2.13
TRAPPC13-211ENST00000512009 PUF60Q9UHX1 559 aaKnown RBP1.78□□□□□ -2.13
TRAPPC13-211ENST00000512009 G3BP2Q9UN86 482 aaKnown RBP1.78□□□□□ -2.13
TRAPPC13-211ENST00000512009 RABGAP1Q9Y3P9 1069 aa1.78□□□□□ -2.13
TRAPPC13-211ENST00000512009 JRKLQ9Y4A0 524 aa1.78□□□□□ -2.13
TRAPPC13-211ENST00000512009 KMT2CQ8NEZ4 4911 aaKnown RBP1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 CTAGE9A4FU28 777 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 POTEMA6NI47 508 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 LGALS16A8MUM7 142 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 FAM86B1E9PN63 330 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 F8W8V4 182 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 PYGLP06737 847 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 FAM86B2P0C5J1 330 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 PRR35P0CG20 571 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 CTAGE8P0CG41 777 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 FCER1AP12319 257 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 ATP2A2P16615 1042 aaKnown RBP1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 PDCP20941 246 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 SMARCA1P28370 1054 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 TCF7P36402 384 aaPredicted RBP1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 POLR2IP36954 125 aaKnown RBP1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 TPD52P55327 224 aaPredicted RBP1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 GJA9P57773 515 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 ZBTB16Q05516 673 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 PABPC4Q13310 644 aaKnown RBP eCLIP1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 CAMK2BQ13554 666 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 ENPP2Q13822 863 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 IRF3Q14653 427 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 TARBP2Q15633 366 aaKnown RBP1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 PDCD2Q16342 344 aaPredicted RBP1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 CBWD6Q4V339 395 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 CBWD3Q5JTY5 395 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 CBWD5Q5RIA9 395 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 SNX30Q5VWJ9 437 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 PLEKHA7Q6IQ23 1121 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 BZW1Q7L1Q6 419 aaKnown RBP1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 CTAGE4Q8IX94 777 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 GSTCDQ8NEC7 633 aa1.77□□□□□ -2.13
TRAPPC13-211ENST00000512009 VPS37AQ8NEZ2 397 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms