RNA–Protein interactions for RNA: ENST00000511708.1

COPS4-210, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 3

Gene COPS4, Length 824 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-210ENST00000511708 BSNDQ8WZ55 320 aa13.12□□□□□ -0.31
COPS4-210ENST00000511708 CNOT6LQ96LI5 555 aaKnown RBP13.12□□□□□ -0.31
COPS4-210ENST00000511708 P2RY13Q9BPV8 354 aa13.12□□□□□ -0.31
COPS4-210ENST00000511708 EIF2AK1Q9BQI3 630 aaKnown RBP13.12□□□□□ -0.31
COPS4-210ENST00000511708 EBF3Q9H4W6 596 aa13.12□□□□□ -0.31
COPS4-210ENST00000511708 ANO2Q9NQ90 1003 aa13.12□□□□□ -0.31
COPS4-210ENST00000511708 SLC38A7Q9NVC3 462 aa13.12□□□□□ -0.31
COPS4-210ENST00000511708 DKK4Q9UBT3 224 aa13.12□□□□□ -0.31
COPS4-210ENST00000511708 MBD1Q9UIS9 605 aaPredicted RBP13.12□□□□□ -0.31
COPS4-210ENST00000511708 NUB1Q9Y5A7 615 aa13.12□□□□□ -0.31
COPS4-210ENST00000511708 USO1O60763 962 aaKnown RBP13.11□□□□□ -0.31
COPS4-210ENST00000511708 OAZ2O95190 189 aa13.11□□□□□ -0.31
COPS4-210ENST00000511708 RPL9P32969 192 aaKnown RBP13.11□□□□□ -0.31
COPS4-210ENST00000511708 CYP4F8P98187 520 aa13.11□□□□□ -0.31
COPS4-210ENST00000511708 NT5DC1Q5TFE4 455 aa13.11□□□□□ -0.31
COPS4-210ENST00000511708 CENPPQ6IPU0 288 aa13.11□□□□□ -0.31
COPS4-210ENST00000511708 GALNT17Q6IS24 598 aa13.11□□□□□ -0.31
COPS4-210ENST00000511708 NEK8Q86SG6 692 aa13.11□□□□□ -0.31
COPS4-210ENST00000511708 CEP120Q8N960 986 aa13.11□□□□□ -0.31
COPS4-210ENST00000511708 BRF1Q92994 677 aa13.11□□□□□ -0.31
COPS4-210ENST00000511708 TBC1D32Q96NH3 1257 aa13.11□□□□□ -0.31
COPS4-210ENST00000511708 PGLYRP2Q96PD5 576 aa13.11□□□□□ -0.31
COPS4-210ENST00000511708 SLC46A2Q9BY10 475 aa13.11□□□□□ -0.31
COPS4-210ENST00000511708 SMG9Q9H0W8 520 aaKnown RBP13.11□□□□□ -0.31
COPS4-210ENST00000511708 IL21Q9HBE4 155 aa13.11□□□□□ -0.31
COPS4-210ENST00000511708 PCDHB8Q9UN66 801 aa13.11□□□□□ -0.31
COPS4-210ENST00000511708 HELZP42694 1942 aaKnown RBP13.1□□□□□ -0.31
COPS4-210ENST00000511708 PTPRQQ9UMZ3 2332 aa13.1□□□□□ -0.31
COPS4-210ENST00000511708 MYO18AQ92614 2054 aaKnown RBP13.1□□□□□ -0.31
COPS4-210ENST00000511708 TK2O00142 265 aa13.1□□□□□ -0.31
COPS4-210ENST00000511708 OR4Q2P0C623 313 aa13.1□□□□□ -0.31
COPS4-210ENST00000511708 XRCC6P12956 609 aaKnown RBP eCLIP13.1□□□□□ -0.31
COPS4-210ENST00000511708 CD59P13987 128 aa13.1□□□□□ -0.31
COPS4-210ENST00000511708 PLA2G2AP14555 144 aa13.1□□□□□ -0.31
COPS4-210ENST00000511708 ARSAP15289 507 aa13.1□□□□□ -0.31
COPS4-210ENST00000511708 KCNE1P15382 129 aa13.1□□□□□ -0.31
COPS4-210ENST00000511708 U2AF2P26368 475 aaKnown RBP eCLIP13.1□□□□□ -0.31
COPS4-210ENST00000511708 GJA4P35212 333 aa13.1□□□□□ -0.31
COPS4-210ENST00000511708 GRM5P41594 1212 aa13.1□□□□□ -0.31
COPS4-210ENST00000511708 ALDH1A3P47895 512 aa13.1□□□□□ -0.31
COPS4-210ENST00000511708 GPR17Q13304 367 aa13.1□□□□□ -0.31
COPS4-210ENST00000511708 Q6ZUG5 572 aa13.1□□□□□ -0.31
COPS4-210ENST00000511708 MAEAQ7L5Y9 396 aa13.1□□□□□ -0.31
COPS4-210ENST00000511708 FAM177A1Q8N128 213 aaPredicted RBP13.1□□□□□ -0.31
COPS4-210ENST00000511708 HDDC3Q8N4P3 179 aa13.1□□□□□ -0.31
COPS4-210ENST00000511708 MCPH1Q8NEM0 835 aa13.1□□□□□ -0.31
COPS4-210ENST00000511708 MDGA1Q8NFP4 955 aa13.1□□□□□ -0.31
COPS4-210ENST00000511708 RIN3Q8TB24 985 aa13.1□□□□□ -0.31
COPS4-210ENST00000511708 PIGOQ8TEQ8 1089 aa13.1□□□□□ -0.31
COPS4-210ENST00000511708 FNBP1Q96RU3 617 aa13.1□□□□□ -0.31
COPS4-210ENST00000511708 UBL7Q96S82 380 aaPredicted RBP13.1□□□□□ -0.31
COPS4-210ENST00000511708 TOPORSQ9NS56 1045 aaPredicted RBP13.1□□□□□ -0.31
COPS4-210ENST00000511708 ANK1P16157 1881 aa13.1□□□□□ -0.31
COPS4-210ENST00000511708 UNC79Q9P2D8 2635 aa13.09□□□□□ -0.31
COPS4-210ENST00000511708 A0A087WWV3 80 aa13.09□□□□□ -0.31
COPS4-210ENST00000511708 M0QZQ0 153 aa13.09□□□□□ -0.31
COPS4-210ENST00000511708 HMGB1P09429 215 aaKnown RBP13.09□□□□□ -0.31
COPS4-210ENST00000511708 CPA1P15085 419 aa13.09□□□□□ -0.31
COPS4-210ENST00000511708 MCM4P33991 863 aa13.09□□□□□ -0.31
COPS4-210ENST00000511708 HOXD12P35452 270 aa13.09□□□□□ -0.31
COPS4-210ENST00000511708 P2RY2P41231 377 aa13.09□□□□□ -0.31
COPS4-210ENST00000511708 DPP6P42658 865 aa13.09□□□□□ -0.31
COPS4-210ENST00000511708 PTGER3P43115 390 aa13.09□□□□□ -0.31
COPS4-210ENST00000511708 ATF7IP2Q5U623 682 aa13.09□□□□□ -0.31
COPS4-210ENST00000511708 ANO7Q6IWH7 933 aa13.09□□□□□ -0.31
COPS4-210ENST00000511708 LPCAT2Q7L5N7 544 aa13.09□□□□□ -0.31
COPS4-210ENST00000511708 SLFN12Q8IYM2 578 aa13.09□□□□□ -0.31
COPS4-210ENST00000511708 CMTM8Q8IZV2 173 aa13.09□□□□□ -0.31
COPS4-210ENST00000511708 FBXL16Q8N461 479 aa13.09□□□□□ -0.31
COPS4-210ENST00000511708 TTC9BQ8N6N2 239 aa13.09□□□□□ -0.31
COPS4-210ENST00000511708 C18orf25Q96B23 403 aaPredicted RBP13.09□□□□□ -0.31
COPS4-210ENST00000511708 CRELD1Q96HD1 420 aa13.09□□□□□ -0.31
COPS4-210ENST00000511708 CCDC43Q96MW1 224 aaKnown RBP13.09□□□□□ -0.31
COPS4-210ENST00000511708 OXCT2Q9BYC2 517 aaPredicted RBP13.09□□□□□ -0.31
COPS4-210ENST00000511708 AGXT2Q9BYV1 514 aa13.09□□□□□ -0.31
COPS4-210ENST00000511708 CAPN10Q9HC96 672 aa13.09□□□□□ -0.31
COPS4-210ENST00000511708 ZMYM5Q9UJ78 669 aa13.09□□□□□ -0.31
COPS4-210ENST00000511708 PILRBQ9UKJ0 227 aa13.09□□□□□ -0.31
COPS4-210ENST00000511708 CCL26Q9Y258 94 aa13.09□□□□□ -0.31
COPS4-210ENST00000511708 SLC27A5Q9Y2P5 690 aa13.09□□□□□ -0.31
COPS4-210ENST00000511708 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.08□□□□□ -0.32
COPS4-210ENST00000511708 MTMR11A4FU01 709 aa13.08□□□□□ -0.32
COPS4-210ENST00000511708 MARCH6O60337 910 aa13.08□□□□□ -0.32
COPS4-210ENST00000511708 CCNT1O60563 726 aaKnown RBP13.08□□□□□ -0.32
COPS4-210ENST00000511708 OPHN1O60890 802 aa13.08□□□□□ -0.32
COPS4-210ENST00000511708 FTH1P19P0C7X4 201 aa13.08□□□□□ -0.32
COPS4-210ENST00000511708 CDC25CP30307 473 aa13.08□□□□□ -0.32
COPS4-210ENST00000511708 NAMPTP43490 491 aa13.08□□□□□ -0.32
COPS4-210ENST00000511708 YARSP54577 528 aaKnown RBP13.08□□□□□ -0.32
COPS4-210ENST00000511708 YWHAHQ04917 246 aaPredicted RBP13.08□□□□□ -0.32
COPS4-210ENST00000511708 KRT32Q14532 448 aa13.08□□□□□ -0.32
COPS4-210ENST00000511708 TRIP6Q15654 476 aaKnown RBP13.08□□□□□ -0.32
COPS4-210ENST00000511708 SPDYCQ5MJ68 293 aa13.08□□□□□ -0.32
COPS4-210ENST00000511708 ITIH5Q86UX2 942 aa13.08□□□□□ -0.32
COPS4-210ENST00000511708 TMEFF1Q8IYR6 380 aa13.08□□□□□ -0.32
COPS4-210ENST00000511708 ATAD1Q8NBU5 361 aa13.08□□□□□ -0.32
COPS4-210ENST00000511708 USP33Q8TEY7 942 aa13.08□□□□□ -0.32
COPS4-210ENST00000511708 USP13Q92995 863 aaPredicted RBP13.08□□□□□ -0.32
COPS4-210ENST00000511708 CD101Q93033 1021 aa13.08□□□□□ -0.32
COPS4-210ENST00000511708 EXOC4Q96A65 974 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms