RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 TWF2Q6IBS0 349 aaKnown RBP9.74□□□□□ -0.85
NR1I3-228ENST00000511676 TRIM72Q6ZMU5 477 aa9.74□□□□□ -0.85
NR1I3-228ENST00000511676 ZNF571Q7Z3V5 609 aaPredicted RBP9.74□□□□□ -0.85
NR1I3-228ENST00000511676 UBR7Q8N806 425 aa9.74□□□□□ -0.85
NR1I3-228ENST00000511676 C1orf127Q8N9H9 656 aa9.74□□□□□ -0.85
NR1I3-228ENST00000511676 SLC30A5Q8TAD4 765 aa9.74□□□□□ -0.85
NR1I3-228ENST00000511676 EPS8L1Q8TE68 723 aa9.74□□□□□ -0.85
NR1I3-228ENST00000511676 PGBD4Q96DM1 585 aa9.74□□□□□ -0.85
NR1I3-228ENST00000511676 PPP1R16BQ96T49 567 aa9.74□□□□□ -0.85
NR1I3-228ENST00000511676 CDCA3Q99618 268 aaPredicted RBP9.74□□□□□ -0.85
NR1I3-228ENST00000511676 TUBB2BQ9BVA1 445 aa9.74□□□□□ -0.85
NR1I3-228ENST00000511676 EIF2AQ9BY44 585 aaKnown RBP9.74□□□□□ -0.85
NR1I3-228ENST00000511676 DNAI2Q9GZS0 605 aa9.74□□□□□ -0.85
NR1I3-228ENST00000511676 RRAGDQ9NQL2 400 aaPredicted RBP9.74□□□□□ -0.85
NR1I3-228ENST00000511676 STK39Q9UEW8 545 aa9.74□□□□□ -0.85
NR1I3-228ENST00000511676 PUF60Q9UHX1 559 aaKnown RBP9.74□□□□□ -0.85
NR1I3-228ENST00000511676 NAGPAQ9UK23 515 aa9.74□□□□□ -0.85
NR1I3-228ENST00000511676 AJAP1Q9UKB5 411 aaPredicted RBP9.74□□□□□ -0.85
NR1I3-228ENST00000511676 MTUS1Q9ULD2 1270 aa9.74□□□□□ -0.85
NR1I3-228ENST00000511676 LRFN2Q9ULH4 789 aa9.74□□□□□ -0.85
NR1I3-228ENST00000511676 IPPQ9Y573 584 aa9.74□□□□□ -0.85
NR1I3-228ENST00000511676 PAXBP1Q9Y5B6 917 aa9.74□□□□□ -0.85
NR1I3-228ENST00000511676 PCDHB12Q9Y5F1 795 aa9.74□□□□□ -0.85
NR1I3-228ENST00000511676 A0A0U1RQF3 1178 aa9.73□□□□□ -0.85
NR1I3-228ENST00000511676 ANO9A1A5B4 782 aa9.73□□□□□ -0.85
NR1I3-228ENST00000511676 MEFVO15553 781 aaPredicted RBP9.73□□□□□ -0.85
NR1I3-228ENST00000511676 HOXA2O43364 376 aa9.73□□□□□ -0.85
NR1I3-228ENST00000511676 RECQL4O94761 1208 aa9.73□□□□□ -0.85
NR1I3-228ENST00000511676 UPP2O95045 317 aa9.73□□□□□ -0.85
NR1I3-228ENST00000511676 EOMESO95936 686 aa9.73□□□□□ -0.85
NR1I3-228ENST00000511676 NFICP08651 508 aa9.73□□□□□ -0.85
NR1I3-228ENST00000511676 PAEPP09466 180 aa9.73□□□□□ -0.85
NR1I3-228ENST00000511676 FGFR4P22455 802 aa9.73□□□□□ -0.85
NR1I3-228ENST00000511676 LRPAP1P30533 357 aa9.73□□□□□ -0.85
NR1I3-228ENST00000511676 ZNF132P52740 706 aa9.73□□□□□ -0.85
NR1I3-228ENST00000511676 DEFB103AP81534 67 aa9.73□□□□□ -0.85
NR1I3-228ENST00000511676 APBA1Q02410 837 aa9.73□□□□□ -0.85
NR1I3-228ENST00000511676 BTG3Q14201 252 aaPredicted RBP9.73□□□□□ -0.85
NR1I3-228ENST00000511676 LPIN1Q14693 890 aa9.73□□□□□ -0.85
NR1I3-228ENST00000511676 TCEAL1Q15170 157 aa9.73□□□□□ -0.85
NR1I3-228ENST00000511676 IFI16Q16666 785 aaKnown RBP9.73□□□□□ -0.85
NR1I3-228ENST00000511676 SEZ6Q53EL9 994 aa9.73□□□□□ -0.85
NR1I3-228ENST00000511676 ZNF667Q5HYK9 610 aa9.73□□□□□ -0.85
NR1I3-228ENST00000511676 FAM117BQ6P1L5 589 aa9.73□□□□□ -0.85
NR1I3-228ENST00000511676 ALKBH5Q6P6C2 394 aaKnown RBP9.73□□□□□ -0.85
NR1I3-228ENST00000511676 GJB7Q6PEY0 223 aa9.73□□□□□ -0.85
NR1I3-228ENST00000511676 TRAF7Q6Q0C0 670 aa9.73□□□□□ -0.85
NR1I3-228ENST00000511676 KIAA1328Q86T90 577 aa9.73□□□□□ -0.85
NR1I3-228ENST00000511676 SMG8Q8ND04 991 aaKnown RBP9.73□□□□□ -0.85
NR1I3-228ENST00000511676 KIF18AQ8NI77 898 aa9.73□□□□□ -0.85
NR1I3-228ENST00000511676 SPATA18Q8TC71 538 aa9.73□□□□□ -0.85
NR1I3-228ENST00000511676 GDPD5Q8WTR4 605 aa9.73□□□□□ -0.85
NR1I3-228ENST00000511676 WNT8BQ93098 351 aa9.73□□□□□ -0.85
NR1I3-228ENST00000511676 VWCEQ96DN2 955 aa9.73□□□□□ -0.85
NR1I3-228ENST00000511676 ZNF560Q96MR9 790 aa9.73□□□□□ -0.85
NR1I3-228ENST00000511676 DESI2Q9BSY9 194 aa9.73□□□□□ -0.85
NR1I3-228ENST00000511676 NXF3Q9H4D5 531 aaKnown RBP9.73□□□□□ -0.85
NR1I3-228ENST00000511676 EPHX3Q9H6B9 360 aa9.73□□□□□ -0.85
NR1I3-228ENST00000511676 FAM105AQ9NUU6 356 aa9.73□□□□□ -0.85
NR1I3-228ENST00000511676 DPP3Q9NY33 737 aa9.73□□□□□ -0.85
NR1I3-228ENST00000511676 CLDND1Q9NY35 253 aa9.73□□□□□ -0.85
NR1I3-228ENST00000511676 SIX4Q9UIU6 781 aa9.73□□□□□ -0.85
NR1I3-228ENST00000511676 NOCTQ9UK39 431 aaKnown RBP9.73□□□□□ -0.85
NR1I3-228ENST00000511676 PADI3Q9ULW8 664 aa9.73□□□□□ -0.85
NR1I3-228ENST00000511676 REXO2Q9Y3B8 237 aaKnown RBP9.73□□□□□ -0.85
NR1I3-228ENST00000511676 PCDHA13Q9Y5I0 950 aa9.73□□□□□ -0.85
NR1I3-228ENST00000511676 MUC3AQ02505 3323 aa9.73□□□□□ -0.85
NR1I3-228ENST00000511676 A0A087X0T9 212 aa9.72□□□□□ -0.85
NR1I3-228ENST00000511676 SMIM28A0A1B0GU29 152 aa9.72□□□□□ -0.85
NR1I3-228ENST00000511676 USP27XA6NNY8 438 aa9.72□□□□□ -0.85
NR1I3-228ENST00000511676 ZNF263O14978 683 aa9.72□□□□□ -0.85
NR1I3-228ENST00000511676 LSM8O95777 96 aaKnown RBP9.72□□□□□ -0.85
NR1I3-228ENST00000511676 FAM228BP0C875 321 aa9.72□□□□□ -0.85
NR1I3-228ENST00000511676 TNNT1P13805 278 aa9.72□□□□□ -0.85
NR1I3-228ENST00000511676 ACO1P21399 889 aaKnown RBP9.72□□□□□ -0.85
NR1I3-228ENST00000511676 CTNNB1P35222 781 aa9.72□□□□□ -0.85
NR1I3-228ENST00000511676 ARHGAP25P42331 645 aa9.72□□□□□ -0.85
NR1I3-228ENST00000511676 MAGEA1P43355 309 aa9.72□□□□□ -0.85
NR1I3-228ENST00000511676 ASPAP45381 313 aa9.72□□□□□ -0.85
NR1I3-228ENST00000511676 HADHBP55084 474 aaKnown RBP9.72□□□□□ -0.85
NR1I3-228ENST00000511676 MYL6P60660 151 aa9.72□□□□□ -0.85
NR1I3-228ENST00000511676 OSTNP61366 133 aa9.72□□□□□ -0.85
NR1I3-228ENST00000511676 CDR2Q01850 454 aa9.72□□□□□ -0.85
NR1I3-228ENST00000511676 INCA1Q0VD86 236 aa9.72□□□□□ -0.85
NR1I3-228ENST00000511676 ARHGAP44Q17R89 818 aa9.72□□□□□ -0.85
NR1I3-228ENST00000511676 LMBRD2Q68DH5 695 aaPredicted RBP9.72□□□□□ -0.85
NR1I3-228ENST00000511676 DPH6Q7L8W6 267 aa9.72□□□□□ -0.85
NR1I3-228ENST00000511676 CDR2LQ86X02 465 aaPredicted RBP9.72□□□□□ -0.85
NR1I3-228ENST00000511676 SUGP1Q8IWZ8 645 aaKnown RBP9.72□□□□□ -0.85
NR1I3-228ENST00000511676 CMTR2Q8IYT2 770 aaKnown RBP9.72□□□□□ -0.85
NR1I3-228ENST00000511676 ACRBPQ8NEB7 543 aa9.72□□□□□ -0.85
NR1I3-228ENST00000511676 TRIM58Q8NG06 486 aa9.72□□□□□ -0.85
NR1I3-228ENST00000511676 CLP1Q92989 425 aaKnown RBP9.72□□□□□ -0.85
NR1I3-228ENST00000511676 TRIM11Q96F44 468 aa9.72□□□□□ -0.85
NR1I3-228ENST00000511676 C16orf45Q96MC5 204 aaPredicted RBP9.72□□□□□ -0.85
NR1I3-228ENST00000511676 AGPAT1Q99943 283 aa9.72□□□□□ -0.85
NR1I3-228ENST00000511676 ISCUQ9H1K1 167 aa9.72□□□□□ -0.85
NR1I3-228ENST00000511676 ELAC1Q9H777 363 aaKnown RBP9.72□□□□□ -0.85
NR1I3-228ENST00000511676 APOBEC3GQ9HC16 384 aaKnown RBP9.72□□□□□ -0.85
NR1I3-228ENST00000511676 RGS18Q9NS28 235 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms