RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 PLEKHA4Q9H4M7 779 aa13.79□□□□□ -0.2
COL6A6-203ENST00000511332 SFXN1Q9H9B4 322 aa13.79□□□□□ -0.2
COL6A6-203ENST00000511332 MAN1C1Q9NR34 630 aa13.79□□□□□ -0.2
COL6A6-203ENST00000511332 NXF1Q9UBU9 619 aaKnown RBP13.79□□□□□ -0.2
COL6A6-203ENST00000511332 FBXW11Q9UKB1 542 aa13.79□□□□□ -0.2
COL6A6-203ENST00000511332 BARX2Q9UMQ3 279 aaPredicted RBP13.79□□□□□ -0.2
COL6A6-203ENST00000511332 NFE2L3Q9Y4A8 694 aa13.79□□□□□ -0.2
COL6A6-203ENST00000511332 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.78□□□□□ -0.2
COL6A6-203ENST00000511332 PMM2O15305 246 aa13.78□□□□□ -0.2
COL6A6-203ENST00000511332 P4HA2O15460 535 aa13.78□□□□□ -0.2
COL6A6-203ENST00000511332 TACC1O75410 805 aa13.78□□□□□ -0.2
COL6A6-203ENST00000511332 AFPP02771 609 aaKnown RBP13.78□□□□□ -0.2
COL6A6-203ENST00000511332 HOXB8P17481 243 aaPredicted RBP13.78□□□□□ -0.2
COL6A6-203ENST00000511332 KCNA5P22460 613 aa13.78□□□□□ -0.2
COL6A6-203ENST00000511332 EEF1GP26641 437 aaKnown RBP13.78□□□□□ -0.2
COL6A6-203ENST00000511332 PCSK1P29120 753 aa13.78□□□□□ -0.2
COL6A6-203ENST00000511332 MTIF2P46199 727 aaKnown RBP13.78□□□□□ -0.2
COL6A6-203ENST00000511332 TSPY1Q01534 308 aa13.78□□□□□ -0.2
COL6A6-203ENST00000511332 SOWAHAQ2M3V2 549 aa13.78□□□□□ -0.2
COL6A6-203ENST00000511332 ANO6Q4KMQ2 910 aa13.78□□□□□ -0.2
COL6A6-203ENST00000511332 CBWD6Q4V339 395 aa13.78□□□□□ -0.2
COL6A6-203ENST00000511332 WDR44Q5JSH3 913 aa13.78□□□□□ -0.2
COL6A6-203ENST00000511332 CBWD3Q5JTY5 395 aa13.78□□□□□ -0.2
COL6A6-203ENST00000511332 CBWD5Q5RIA9 395 aa13.78□□□□□ -0.2
COL6A6-203ENST00000511332 TPGS2Q68CL5 300 aa13.78□□□□□ -0.2
COL6A6-203ENST00000511332 SCARA3Q6AZY7 606 aa13.78□□□□□ -0.2
COL6A6-203ENST00000511332 ANKRD54Q6NXT1 300 aa13.78□□□□□ -0.2
COL6A6-203ENST00000511332 LIMS2Q7Z4I7 341 aa13.78□□□□□ -0.2
COL6A6-203ENST00000511332 BPIFA3Q9BQP9 254 aa13.78□□□□□ -0.2
COL6A6-203ENST00000511332 NIF3L1Q9GZT8 377 aa13.78□□□□□ -0.2
COL6A6-203ENST00000511332 RAB20Q9NX57 234 aa13.78□□□□□ -0.2
COL6A6-203ENST00000511332 MAFFQ9ULX9 164 aa13.78□□□□□ -0.2
COL6A6-203ENST00000511332 COQ4Q9Y3A0 265 aa13.78□□□□□ -0.2
COL6A6-203ENST00000511332 MYH10P35580 1976 aa13.78□□□□□ -0.2
COL6A6-203ENST00000511332 WDR27A2RRH5 827 aa13.77□□□□□ -0.21
COL6A6-203ENST00000511332 KCNJ18B7U540 433 aa13.77□□□□□ -0.21
COL6A6-203ENST00000511332 ADAM12O43184 909 aa13.77□□□□□ -0.21
COL6A6-203ENST00000511332 SLC34A2O95436 690 aa13.77□□□□□ -0.21
COL6A6-203ENST00000511332 FAM163BP0C2L3 166 aa13.77□□□□□ -0.21
COL6A6-203ENST00000511332 PRKCSHP14314 528 aaPredicted RBP13.77□□□□□ -0.21
COL6A6-203ENST00000511332 WARSP23381 471 aaKnown RBP13.77□□□□□ -0.21
COL6A6-203ENST00000511332 LTBRP36941 435 aa13.77□□□□□ -0.21
COL6A6-203ENST00000511332 ARPP19P56211 112 aa13.77□□□□□ -0.21
COL6A6-203ENST00000511332 RBM10P98175 930 aaKnown RBP13.77□□□□□ -0.21
COL6A6-203ENST00000511332 KCNH2Q12809 1159 aa13.77□□□□□ -0.21
COL6A6-203ENST00000511332 SMARCB1Q12824 385 aa13.77□□□□□ -0.21
COL6A6-203ENST00000511332 KCNJ12Q14500 433 aa13.77□□□□□ -0.21
COL6A6-203ENST00000511332 MAN2A1Q16706 1144 aa13.77□□□□□ -0.21
COL6A6-203ENST00000511332 ZSCAN23Q3MJ62 389 aa13.77□□□□□ -0.21
COL6A6-203ENST00000511332 LILRA6Q6PI73 481 aa13.77□□□□□ -0.21
COL6A6-203ENST00000511332 RSPO2Q6UXX9 243 aaPredicted RBP13.77□□□□□ -0.21
COL6A6-203ENST00000511332 SCARA5Q6ZMJ2 495 aa13.77□□□□□ -0.21
COL6A6-203ENST00000511332 CCDC149Q6ZUS6 474 aa13.77□□□□□ -0.21
COL6A6-203ENST00000511332 RTL10Q7L3V2 364 aa13.77□□□□□ -0.21
COL6A6-203ENST00000511332 CREBRFQ8IUR6 639 aa13.77□□□□□ -0.21
COL6A6-203ENST00000511332 DCP1BQ8IZD4 617 aaKnown RBP13.77□□□□□ -0.21
COL6A6-203ENST00000511332 KREMEN2Q8NCW0 462 aa13.77□□□□□ -0.21
COL6A6-203ENST00000511332 OR10T2Q8NGX3 314 aa13.77□□□□□ -0.21
COL6A6-203ENST00000511332 ZNF461Q8TAF7 563 aa13.77□□□□□ -0.21
COL6A6-203ENST00000511332 FAXDC2Q96IV6 333 aa13.77□□□□□ -0.21
COL6A6-203ENST00000511332 ACBD6Q9BR61 282 aa13.77□□□□□ -0.21
COL6A6-203ENST00000511332 SNX25Q9H3E2 840 aa13.77□□□□□ -0.21
COL6A6-203ENST00000511332 DDX43Q9NXZ2 648 aaKnown RBP13.77□□□□□ -0.21
COL6A6-203ENST00000511332 CLEC1BQ9P126 229 aa13.77□□□□□ -0.21
COL6A6-203ENST00000511332 CD207Q9UJ71 328 aa13.77□□□□□ -0.21
COL6A6-203ENST00000511332 PATJQ8NI35 1801 aa13.76□□□□□ -0.21
COL6A6-203ENST00000511332 H3BQ06 376 aaPredicted RBP13.76□□□□□ -0.21
COL6A6-203ENST00000511332 GABRDO14764 452 aa13.76□□□□□ -0.21
COL6A6-203ENST00000511332 ABLIM3O94929 683 aa13.76□□□□□ -0.21
COL6A6-203ENST00000511332 CAVIN2O95810 425 aa13.76□□□□□ -0.21
COL6A6-203ENST00000511332 TPM2P07951 284 aa13.76□□□□□ -0.21
COL6A6-203ENST00000511332 ATF2P15336 505 aa13.76□□□□□ -0.21
COL6A6-203ENST00000511332 TRIM21P19474 475 aaKnown RBP13.76□□□□□ -0.21
COL6A6-203ENST00000511332 ELF1P32519 619 aa13.76□□□□□ -0.21
COL6A6-203ENST00000511332 ASPAP45381 313 aa13.76□□□□□ -0.21
COL6A6-203ENST00000511332 ITIH3Q06033 890 aa13.76□□□□□ -0.21
COL6A6-203ENST00000511332 DLX2Q07687 328 aaPredicted RBP13.76□□□□□ -0.21
COL6A6-203ENST00000511332 PUS10Q3MIT2 529 aaKnown RBP13.76□□□□□ -0.21
COL6A6-203ENST00000511332 LEXMQ3ZCV2 418 aa13.76□□□□□ -0.21
COL6A6-203ENST00000511332 CDKAL1Q5VV42 579 aa13.76□□□□□ -0.21
COL6A6-203ENST00000511332 IRF2BP1Q8IU81 584 aa13.76□□□□□ -0.21
COL6A6-203ENST00000511332 SMRP1Q8NCR6 262 aa13.76□□□□□ -0.21
COL6A6-203ENST00000511332 ANKRD20A12PQ8NF67 263 aa13.76□□□□□ -0.21
COL6A6-203ENST00000511332 C2orf15Q8WU43 125 aaKnown RBP13.76□□□□□ -0.21
COL6A6-203ENST00000511332 KBTBD7Q8WVZ9 684 aa13.76□□□□□ -0.21
COL6A6-203ENST00000511332 ATXN2LQ8WWM7 1075 aaKnown RBP13.76□□□□□ -0.21
COL6A6-203ENST00000511332 MSLNLQ96KJ4 702 aa13.76□□□□□ -0.21
COL6A6-203ENST00000511332 RTP3Q9BQQ7 232 aa13.76□□□□□ -0.21
COL6A6-203ENST00000511332 PI4K2AQ9BTU6 479 aa13.76□□□□□ -0.21
COL6A6-203ENST00000511332 FUCA2Q9BTY2 467 aa13.76□□□□□ -0.21
COL6A6-203ENST00000511332 BCO2Q9BYV7 579 aa13.76□□□□□ -0.21
COL6A6-203ENST00000511332 DNAI2Q9GZS0 605 aa13.76□□□□□ -0.21
COL6A6-203ENST00000511332 ZCWPW1Q9H0M4 648 aa13.76□□□□□ -0.21
COL6A6-203ENST00000511332 FAM124BQ9H5Z6 455 aaPredicted RBP13.76□□□□□ -0.21
COL6A6-203ENST00000511332 SMYD3Q9H7B4 428 aa13.76□□□□□ -0.21
COL6A6-203ENST00000511332 ZDHHC7Q9NXF8 308 aa13.76□□□□□ -0.21
COL6A6-203ENST00000511332 AFF4Q9UHB7 1163 aaKnown RBP13.76□□□□□ -0.21
COL6A6-203ENST00000511332 POLIQ9UNA4 740 aa13.76□□□□□ -0.21
COL6A6-203ENST00000511332 FAM50BQ9Y247 325 aa13.76□□□□□ -0.21
COL6A6-203ENST00000511332 PRUNE2Q8WUY3 3088 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms