RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 TGFB1I1O43294 461 aa13.65□□□□□ -0.22
HMGB2-205ENST00000511316 GAS7O60861 476 aa13.65□□□□□ -0.22
HMGB2-205ENST00000511316 ATP5HO75947 161 aa13.65□□□□□ -0.22
HMGB2-205ENST00000511316 ACRP10323 421 aa13.65□□□□□ -0.22
HMGB2-205ENST00000511316 FLT3P36888 993 aa13.65□□□□□ -0.22
HMGB2-205ENST00000511316 PLTPP55058 493 aa13.65□□□□□ -0.22
HMGB2-205ENST00000511316 CACNB1Q02641 598 aaPredicted RBP13.65□□□□□ -0.22
HMGB2-205ENST00000511316 ENPEPQ07075 957 aa13.65□□□□□ -0.22
HMGB2-205ENST00000511316 BFSP1Q12934 665 aa13.65□□□□□ -0.22
HMGB2-205ENST00000511316 ZNF268Q14587 947 aaPredicted RBP13.65□□□□□ -0.22
HMGB2-205ENST00000511316 TCTN1Q2MV58 587 aa13.65□□□□□ -0.22
HMGB2-205ENST00000511316 ZNF618Q5T7W0 954 aa13.65□□□□□ -0.22
HMGB2-205ENST00000511316 MYCT1Q8N699 235 aa13.65□□□□□ -0.22
HMGB2-205ENST00000511316 TRAPPC12Q8WVT3 735 aa13.65□□□□□ -0.22
HMGB2-205ENST00000511316 ART4Q93070 314 aa13.65□□□□□ -0.22
HMGB2-205ENST00000511316 TIPINQ9BVW5 301 aa13.65□□□□□ -0.22
HMGB2-205ENST00000511316 CELF4Q9BZC1 486 aaKnown RBP13.65□□□□□ -0.22
HMGB2-205ENST00000511316 TRIM7Q9C029 511 aa13.65□□□□□ -0.22
HMGB2-205ENST00000511316 CTTNBP2NLQ9P2B4 639 aa13.65□□□□□ -0.22
HMGB2-205ENST00000511316 WRAP73Q9P2S5 460 aaPredicted RBP13.65□□□□□ -0.22
HMGB2-205ENST00000511316 CEP83Q9Y592 693 aa13.65□□□□□ -0.22
HMGB2-205ENST00000511316 ALG6Q9Y672 507 aa13.65□□□□□ -0.22
HMGB2-205ENST00000511316 NBNO60934 754 aa13.64□□□□□ -0.23
HMGB2-205ENST00000511316 ATP6V1G2O95670 118 aa13.64□□□□□ -0.23
HMGB2-205ENST00000511316 ECEL1O95672 775 aa13.64□□□□□ -0.23
HMGB2-205ENST00000511316 ITIH2P19823 946 aa13.64□□□□□ -0.23
HMGB2-205ENST00000511316 PTGIRP43119 386 aa13.64□□□□□ -0.23
HMGB2-205ENST00000511316 SLC26A2P50443 739 aa13.64□□□□□ -0.23
HMGB2-205ENST00000511316 ELF3P78545 371 aaPredicted RBP13.64□□□□□ -0.23
HMGB2-205ENST00000511316 FPGSQ05932 587 aa13.64□□□□□ -0.23
HMGB2-205ENST00000511316 NR1H3Q13133 447 aa13.64□□□□□ -0.23
HMGB2-205ENST00000511316 GRIK4Q16099 956 aa13.64□□□□□ -0.23
HMGB2-205ENST00000511316 ZDHHC24Q6UX98 284 aa13.64□□□□□ -0.23
HMGB2-205ENST00000511316 C1orf186Q6ZWK4 172 aa13.64□□□□□ -0.23
HMGB2-205ENST00000511316 ZNF365Q70YC5 407 aa13.64□□□□□ -0.23
HMGB2-205ENST00000511316 USP37Q86T82 979 aa13.64□□□□□ -0.23
HMGB2-205ENST00000511316 CEP57Q86XR8 500 aa13.64□□□□□ -0.23
HMGB2-205ENST00000511316 GPIHBP1Q8IV16 184 aa13.64□□□□□ -0.23
HMGB2-205ENST00000511316 FAM178BQ8IXR5 827 aa13.64□□□□□ -0.23
HMGB2-205ENST00000511316 RIBC1Q8N443 379 aaPredicted RBP13.64□□□□□ -0.23
HMGB2-205ENST00000511316 HSD17B14Q9BPX1 270 aa13.64□□□□□ -0.23
HMGB2-205ENST00000511316 CCDC77Q9BR77 488 aa13.64□□□□□ -0.23
HMGB2-205ENST00000511316 TRIM51Q9BSJ1 452 aa13.64□□□□□ -0.23
HMGB2-205ENST00000511316 PPCSQ9HAB8 311 aa13.64□□□□□ -0.23
HMGB2-205ENST00000511316 CD248Q9HCU0 757 aa13.64□□□□□ -0.23
HMGB2-205ENST00000511316 ZNF302Q9NR11 478 aa13.64□□□□□ -0.23
HMGB2-205ENST00000511316 GABBR1Q9UBS5 961 aa13.64□□□□□ -0.23
HMGB2-205ENST00000511316 USP15Q9Y4E8 981 aaPredicted RBP13.64□□□□□ -0.23
HMGB2-205ENST00000511316 IGSF9BQ9UPX0 1349 aa13.64□□□□□ -0.23
HMGB2-205ENST00000511316 WDR64B1ANS9 1081 aa13.64□□□□□ -0.23
HMGB2-205ENST00000511316 RIPK2O43353 540 aa13.64□□□□□ -0.23
HMGB2-205ENST00000511316 MCCD1P59942 119 aaPredicted RBP13.64□□□□□ -0.23
HMGB2-205ENST00000511316 CCDC15Q0P6D6 951 aa13.64□□□□□ -0.23
HMGB2-205ENST00000511316 CTTNQ14247 550 aaKnown RBP13.64□□□□□ -0.23
HMGB2-205ENST00000511316 SLC29A2Q14542 456 aa13.64□□□□□ -0.23
HMGB2-205ENST00000511316 PPP1R7Q15435 360 aa13.64□□□□□ -0.23
HMGB2-205ENST00000511316 LRIT3Q3SXY7 679 aa13.64□□□□□ -0.23
HMGB2-205ENST00000511316 PPP1R2P3Q6NXS1 205 aa13.64□□□□□ -0.23
HMGB2-205ENST00000511316 MIS18BP1Q6P0N0 1132 aa13.64□□□□□ -0.23
HMGB2-205ENST00000511316 CCDC137Q6PK04 289 aaKnown RBP13.64□□□□□ -0.23
HMGB2-205ENST00000511316 PPP1R21Q6ZMI0 780 aa13.64□□□□□ -0.23
HMGB2-205ENST00000511316 ZNF720Q7Z2F6 126 aa13.64□□□□□ -0.23
HMGB2-205ENST00000511316 TMEM199Q8N511 208 aa13.64□□□□□ -0.23
HMGB2-205ENST00000511316 CFAP61Q8NHU2 1237 aa13.64□□□□□ -0.23
HMGB2-205ENST00000511316 FBXO25Q8TCJ0 367 aa13.64□□□□□ -0.23
HMGB2-205ENST00000511316 DYDC1Q8WWB3 177 aa13.64□□□□□ -0.23
HMGB2-205ENST00000511316 TRIM11Q96F44 468 aa13.64□□□□□ -0.23
HMGB2-205ENST00000511316 SCLT1Q96NL6 688 aa13.64□□□□□ -0.23
HMGB2-205ENST00000511316 TEKT3Q9BXF9 490 aa13.64□□□□□ -0.23
HMGB2-205ENST00000511316 EPB41L4BQ9H329 900 aa13.64□□□□□ -0.23
HMGB2-205ENST00000511316 AZI2Q9H6S1 392 aa13.64□□□□□ -0.23
HMGB2-205ENST00000511316 LRRC19Q9H756 370 aa13.64□□□□□ -0.23
HMGB2-205ENST00000511316 OSGEPQ9NPF4 335 aa13.64□□□□□ -0.23
HMGB2-205ENST00000511316 IL23AQ9NPF7 189 aa13.64□□□□□ -0.23
HMGB2-205ENST00000511316 AGPAT3Q9NRZ7 376 aa13.64□□□□□ -0.23
HMGB2-205ENST00000511316 GRHL1Q9NZI5 618 aa13.64□□□□□ -0.23
HMGB2-205ENST00000511316 CXXC1Q9P0U4 656 aaPredicted RBP13.64□□□□□ -0.23
HMGB2-205ENST00000511316 WDR81Q562E7 1941 aa13.64□□□□□ -0.23
HMGB2-205ENST00000511316 SCN5AQ14524 2016 aa13.64□□□□□ -0.23
HMGB2-205ENST00000511316 SNX3O60493 162 aa13.63□□□□□ -0.23
HMGB2-205ENST00000511316 GAS8O95995 478 aa13.63□□□□□ -0.23
HMGB2-205ENST00000511316 CHRNA1P02708 482 aa13.63□□□□□ -0.23
HMGB2-205ENST00000511316 VIMP08670 466 aaKnown RBP13.63□□□□□ -0.23
HMGB2-205ENST00000511316 CCND1P24385 295 aa13.63□□□□□ -0.23
HMGB2-205ENST00000511316 CASP4P49662 377 aa13.63□□□□□ -0.23
HMGB2-205ENST00000511316 RWDD2BP57060 319 aa13.63□□□□□ -0.23
HMGB2-205ENST00000511316 TARBP2Q15633 366 aaKnown RBP13.63□□□□□ -0.23
HMGB2-205ENST00000511316 DCAF12L1Q5VU92 463 aa13.63□□□□□ -0.23
HMGB2-205ENST00000511316 HIBCHQ6NVY1 386 aaPredicted RBP13.63□□□□□ -0.23
HMGB2-205ENST00000511316 ARHGEF18Q6ZSZ5 1173 aa13.63□□□□□ -0.23
HMGB2-205ENST00000511316 MAB21L3Q8N8X9 362 aa13.63□□□□□ -0.23
HMGB2-205ENST00000511316 RDM1Q8NG50 284 aa13.63□□□□□ -0.23
HMGB2-205ENST00000511316 N4BP2L2Q92802 583 aaPredicted RBP13.63□□□□□ -0.23
HMGB2-205ENST00000511316 RAB3IPQ96QF0 476 aaPredicted RBP13.63□□□□□ -0.23
HMGB2-205ENST00000511316 GOLPH3Q9H4A6 298 aa13.63□□□□□ -0.23
HMGB2-205ENST00000511316 EBF2Q9HAK2 575 aa13.63□□□□□ -0.23
HMGB2-205ENST00000511316 NOD2Q9HC29 1040 aa13.63□□□□□ -0.23
HMGB2-205ENST00000511316 ARL2BPQ9Y2Y0 163 aa13.63□□□□□ -0.23
HMGB2-205ENST00000511316 ZMYM2Q9UBW7 1377 aa13.63□□□□□ -0.23
HMGB2-205ENST00000511316 CHMP2AO43633 222 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms