RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 MAGEC2Q9UBF1 373 aaPredicted RBP6.79□□□□□ -1.32
GYPB-212ENST00000511198 VWA7Q9Y334 891 aa6.79□□□□□ -1.32
GYPB-212ENST00000511198 MYBBP1AQ9BQG0 1328 aaKnown RBP6.78□□□□□ -1.32
GYPB-212ENST00000511198 PQBP1O60828 265 aaKnown RBP6.78□□□□□ -1.32
GYPB-212ENST00000511198 CNGA1P29973 690 aa6.78□□□□□ -1.32
GYPB-212ENST00000511198 FLT3P36888 993 aa6.78□□□□□ -1.32
GYPB-212ENST00000511198 RPS19P39019 145 aaKnown RBP6.78□□□□□ -1.32
GYPB-212ENST00000511198 ANTXR2P58335 489 aa6.78□□□□□ -1.32
GYPB-212ENST00000511198 ROM1Q03395 351 aa6.78□□□□□ -1.32
GYPB-212ENST00000511198 PPIGQ13427 754 aaKnown RBP eCLIP6.78□□□□□ -1.32
GYPB-212ENST00000511198 PRKD1Q15139 912 aaPredicted RBP6.78□□□□□ -1.32
GYPB-212ENST00000511198 TKFCQ3LXA3 575 aa6.78□□□□□ -1.32
GYPB-212ENST00000511198 TREML2Q5T2D2 321 aa6.78□□□□□ -1.32
GYPB-212ENST00000511198 ANO1Q5XXA6 986 aa6.78□□□□□ -1.32
GYPB-212ENST00000511198 CRIP3Q6Q6R5 217 aa6.78□□□□□ -1.32
GYPB-212ENST00000511198 POLNQ7Z5Q5 900 aa6.78□□□□□ -1.32
GYPB-212ENST00000511198 KIAA2013Q8IYS2 634 aa6.78□□□□□ -1.32
GYPB-212ENST00000511198 E2F7Q96AV8 911 aa6.78□□□□□ -1.32
GYPB-212ENST00000511198 PHACTR3Q96KR7 559 aa6.78□□□□□ -1.32
GYPB-212ENST00000511198 ZNF747Q9BV97 191 aa6.78□□□□□ -1.32
GYPB-212ENST00000511198 UPF3BQ9BZI7 483 aaKnown RBP6.78□□□□□ -1.32
GYPB-212ENST00000511198 PCIF1Q9H4Z3 704 aa6.78□□□□□ -1.32
GYPB-212ENST00000511198 AGO3Q9H9G7 860 aaKnown RBP6.78□□□□□ -1.32
GYPB-212ENST00000511198 MAGEL2Q9UJ55 1249 aa6.78□□□□□ -1.32
GYPB-212ENST00000511198 AFG3L2Q9Y4W6 797 aa6.78□□□□□ -1.32
GYPB-212ENST00000511198 CTDP1Q9Y5B0 961 aaPredicted RBP6.78□□□□□ -1.32
GYPB-212ENST00000511198 UBA6A0AVT1 1052 aaPredicted RBP6.77□□□□□ -1.33
GYPB-212ENST00000511198 PMS2P1A4D2B8 440 aa6.77□□□□□ -1.33
GYPB-212ENST00000511198 KBTBD13C9JR72 458 aa6.77□□□□□ -1.33
GYPB-212ENST00000511198 SLC9A1P19634 815 aa6.77□□□□□ -1.33
GYPB-212ENST00000511198 FOXL1Q12952 345 aa6.77□□□□□ -1.33
GYPB-212ENST00000511198 ADAM15Q13444 863 aa6.77□□□□□ -1.33
GYPB-212ENST00000511198 DCTN1Q14203 1278 aa6.77□□□□□ -1.33
GYPB-212ENST00000511198 EPHA7Q15375 998 aa6.77□□□□□ -1.33
GYPB-212ENST00000511198 TCEA2Q15560 299 aa6.77□□□□□ -1.33
GYPB-212ENST00000511198 ZNF174Q15697 407 aa6.77□□□□□ -1.33
GYPB-212ENST00000511198 C21orf62-AS1Q17RA5 79 aa6.77□□□□□ -1.33
GYPB-212ENST00000511198 TTC38Q5R3I4 469 aa6.77□□□□□ -1.33
GYPB-212ENST00000511198 ESRP1Q6NXG1 681 aaKnown RBP6.77□□□□□ -1.33
GYPB-212ENST00000511198 MAMDC4Q6UXC1 1216 aa6.77□□□□□ -1.33
GYPB-212ENST00000511198 HOMER1Q86YM7 354 aa6.77□□□□□ -1.33
GYPB-212ENST00000511198 ADHFE1Q8IWW8 467 aa6.77□□□□□ -1.33
GYPB-212ENST00000511198 ARNTL2Q8WYA1 636 aa6.77□□□□□ -1.33
GYPB-212ENST00000511198 ELF4Q99607 663 aaPredicted RBP6.77□□□□□ -1.33
GYPB-212ENST00000511198 TBX21Q9UL17 535 aa6.77□□□□□ -1.33
GYPB-212ENST00000511198 FAM184BQ9ULE4 1060 aa6.77□□□□□ -1.33
GYPB-212ENST00000511198 ZHX2Q9Y6X8 837 aa6.77□□□□□ -1.33
GYPB-212ENST00000511198 H3BQ06 376 aaPredicted RBP6.76□□□□□ -1.33
GYPB-212ENST00000511198 SLC26A4O43511 780 aa6.76□□□□□ -1.33
GYPB-212ENST00000511198 AKAP8O43823 692 aaKnown RBP6.76□□□□□ -1.33
GYPB-212ENST00000511198 CA3P07451 260 aa6.76□□□□□ -1.33
GYPB-212ENST00000511198 POU3F2P20265 443 aaPredicted RBP6.76□□□□□ -1.33
GYPB-212ENST00000511198 ACO1P21399 889 aaKnown RBP6.76□□□□□ -1.33
GYPB-212ENST00000511198 TACR2P21452 398 aa6.76□□□□□ -1.33
GYPB-212ENST00000511198 GCLCP48506 637 aaPredicted RBP6.76□□□□□ -1.33
GYPB-212ENST00000511198 MYBPC3Q14896 1274 aa6.76□□□□□ -1.33
GYPB-212ENST00000511198 SLFN12LQ6IEE8 588 aa6.76□□□□□ -1.33
GYPB-212ENST00000511198 PSRC1Q6PGN9 363 aaPredicted RBP6.76□□□□□ -1.33
GYPB-212ENST00000511198 KLHDC10Q6PID8 442 aa6.76□□□□□ -1.33
GYPB-212ENST00000511198 CCDC174Q6PII3 467 aa6.76□□□□□ -1.33
GYPB-212ENST00000511198 ANKRD18AQ8IVF6 992 aa6.76□□□□□ -1.33
GYPB-212ENST00000511198 OR5AN1Q8NGI8 311 aa6.76□□□□□ -1.33
GYPB-212ENST00000511198 NEK9Q8TD19 979 aa6.76□□□□□ -1.33
GYPB-212ENST00000511198 SOCS4Q8WXH5 440 aa6.76□□□□□ -1.33
GYPB-212ENST00000511198 ISCA1Q9BUE6 129 aa6.76□□□□□ -1.33
GYPB-212ENST00000511198 FANCLQ9NW38 375 aa6.76□□□□□ -1.33
GYPB-212ENST00000511198 PLA2G3Q9NZ20 509 aa6.76□□□□□ -1.33
GYPB-212ENST00000511198 SAE1Q9UBE0 346 aaPredicted RBP6.76□□□□□ -1.33
GYPB-212ENST00000511198 MORF4L1Q9UBU8 362 aa6.76□□□□□ -1.33
GYPB-212ENST00000511198 AGTPBP1Q9UPW5 1226 aa6.76□□□□□ -1.33
GYPB-212ENST00000511198 SPO11Q9Y5K1 396 aa6.76□□□□□ -1.33
GYPB-212ENST00000511198 PTPRFP10586 1907 aa6.76□□□□□ -1.33
GYPB-212ENST00000511198 UTYO14607 1347 aa6.76□□□□□ -1.33
GYPB-212ENST00000511198 FGBP02675 491 aa6.75□□□□□ -1.33
GYPB-212ENST00000511198 AMHP03971 560 aa6.75□□□□□ -1.33
GYPB-212ENST00000511198 C6P13671 934 aa6.75□□□□□ -1.33
GYPB-212ENST00000511198 ATP2A2P16615 1042 aaKnown RBP6.75□□□□□ -1.33
GYPB-212ENST00000511198 CYP2C19P33261 490 aa6.75□□□□□ -1.33
GYPB-212ENST00000511198 ADCY7P51828 1080 aa6.75□□□□□ -1.33
GYPB-212ENST00000511198 EIF4A1P60842 406 aaKnown RBP6.75□□□□□ -1.33
GYPB-212ENST00000511198 FKBP1AP62942 108 aaKnown RBP6.75□□□□□ -1.33
GYPB-212ENST00000511198 TAP1Q03518 808 aa6.75□□□□□ -1.33
GYPB-212ENST00000511198 AIMP1Q12904 312 aaKnown RBP6.75□□□□□ -1.33
GYPB-212ENST00000511198 LRRC41Q15345 812 aa6.75□□□□□ -1.33
GYPB-212ENST00000511198 TAF7Q15545 349 aaPredicted RBP6.75□□□□□ -1.33
GYPB-212ENST00000511198 C16orf86Q6ZW13 317 aa6.75□□□□□ -1.33
GYPB-212ENST00000511198 ANKRD33Q7Z3H0 272 aa6.75□□□□□ -1.33
GYPB-212ENST00000511198 KIF18BQ86Y91 864 aa6.75□□□□□ -1.33
GYPB-212ENST00000511198 TUBGCP5Q96RT8 1024 aa6.75□□□□□ -1.33
GYPB-212ENST00000511198 NELFAQ9H3P2 528 aa6.75□□□□□ -1.33
GYPB-212ENST00000511198 OXSMQ9NWU1 459 aa6.75□□□□□ -1.33
GYPB-212ENST00000511198 H2AFY2Q9P0M6 372 aaPredicted RBP6.75□□□□□ -1.33
GYPB-212ENST00000511198 CEP295Q9C0D2 2601 aa6.74□□□□□ -1.33
GYPB-212ENST00000511198 ITPR1Q14643 2758 aa6.74□□□□□ -1.33
GYPB-212ENST00000511198 C2orf78A6NCI8 922 aa6.74□□□□□ -1.33
GYPB-212ENST00000511198 F2P00734 622 aa6.74□□□□□ -1.33
GYPB-212ENST00000511198 FSHBP01225 129 aa6.74□□□□□ -1.33
GYPB-212ENST00000511198 MSX2P35548 267 aaPredicted RBP6.74□□□□□ -1.33
GYPB-212ENST00000511198 RGS2P41220 211 aa6.74□□□□□ -1.33
GYPB-212ENST00000511198 DGKDQ16760 1214 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms