RNA–Protein interactions for RNA: ENST00000511081.5

CLDND1-223, Transcript of claudin domain containing 1, human

TSL 2 BASIC

Gene CLDND1, Length 642 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLDND1-223	ENST00000511081	GPC5	P78333	572 aa		13.09	□□□□□ -0.31
CLDND1-223	ENST00000511081	TFAM	Q00059	246 aa	Known RBP	13.09	□□□□□ -0.31
CLDND1-223	ENST00000511081	TWF1	Q12792	350 aa		13.09	□□□□□ -0.31
CLDND1-223	ENST00000511081	SMARCB1	Q12824	385 aa		13.09	□□□□□ -0.31
CLDND1-223	ENST00000511081	CUL4B	Q13620	913 aa		13.09	□□□□□ -0.31
CLDND1-223	ENST00000511081	SURF1	Q15526	300 aa		13.09	□□□□□ -0.31
CLDND1-223	ENST00000511081	SV2C	Q496J9	727 aa		13.09	□□□□□ -0.31
CLDND1-223	ENST00000511081	CYP4A22	Q5TCH4	519 aa		13.09	□□□□□ -0.31
CLDND1-223	ENST00000511081	WSCD1	Q658N2	575 aa		13.09	□□□□□ -0.31
CLDND1-223	ENST00000511081	LRRTM3	Q86VH5	581 aa		13.09	□□□□□ -0.31
CLDND1-223	ENST00000511081	C12orf56	Q8IXR9	622 aa		13.09	□□□□□ -0.31
CLDND1-223	ENST00000511081	HS6ST3	Q8IZP7	471 aa		13.09	□□□□□ -0.31
CLDND1-223	ENST00000511081	SIX5	Q8N196	739 aa		13.09	□□□□□ -0.31
CLDND1-223	ENST00000511081	ATAD1	Q8NBU5	361 aa		13.09	□□□□□ -0.31
CLDND1-223	ENST00000511081	GPR152	Q8TDT2	470 aa		13.09	□□□□□ -0.31
CLDND1-223	ENST00000511081	TCEAL4	Q96EI5	215 aa		13.09	□□□□□ -0.31
CLDND1-223	ENST00000511081	MCRS1	Q96EZ8	462 aa		13.09	□□□□□ -0.31
CLDND1-223	ENST00000511081	CORO1B	Q9BR76	489 aa		13.09	□□□□□ -0.31
CLDND1-223	ENST00000511081	DNAJC25	Q9H1X3	360 aa		13.09	□□□□□ -0.31
CLDND1-223	ENST00000511081	BLZF1	Q9H2G9	400 aa		13.09	□□□□□ -0.31
CLDND1-223	ENST00000511081	TRPV4	Q9HBA0	871 aa		13.09	□□□□□ -0.31
CLDND1-223	ENST00000511081	HSPBP1	Q9NZL4	362 aa		13.09	□□□□□ -0.31
CLDND1-223	ENST00000511081	CGN	Q9P2M7	1197 aa	Known RBP	13.09	□□□□□ -0.31
CLDND1-223	ENST00000511081	USP25	Q9UHP3	1055 aa		13.09	□□□□□ -0.31
CLDND1-223	ENST00000511081	SERTAD1	Q9UHV2	236 aa		13.09	□□□□□ -0.31
CLDND1-223	ENST00000511081	SIX4	Q9UIU6	781 aa		13.09	□□□□□ -0.31
CLDND1-223	ENST00000511081	ITGA11	Q9UKX5	1188 aa		13.09	□□□□□ -0.31
CLDND1-223	ENST00000511081	AGAP1	Q9UPQ3	857 aa		13.09	□□□□□ -0.31
CLDND1-223	ENST00000511081	YIPF1	Q9Y548	306 aa		13.09	□□□□□ -0.31
CLDND1-223	ENST00000511081	UBE4B	O95155	1302 aa		13.09	□□□□□ -0.31
CLDND1-223	ENST00000511081	TSC2	P49815	1807 aa		13.09	□□□□□ -0.31
CLDND1-223	ENST00000511081	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	13.08	□□□□□ -0.32
CLDND1-223	ENST00000511081	ITGB3	P05106	788 aa		13.08	□□□□□ -0.32
CLDND1-223	ENST00000511081	CFH	P08603	1231 aa		13.08	□□□□□ -0.32
CLDND1-223	ENST00000511081	CEBPB	P17676	345 aa		13.08	□□□□□ -0.32
CLDND1-223	ENST00000511081	FCAR	P24071	287 aa		13.08	□□□□□ -0.32
CLDND1-223	ENST00000511081	POLR2B	P30876	1174 aa	Known RBP	13.08	□□□□□ -0.32
CLDND1-223	ENST00000511081	STARD6	P59095	220 aa		13.08	□□□□□ -0.32
CLDND1-223	ENST00000511081	PLD1	Q13393	1074 aa		13.08	□□□□□ -0.32
CLDND1-223	ENST00000511081	IQCE	Q6IPM2	695 aa		13.08	□□□□□ -0.32
CLDND1-223	ENST00000511081	METTL23	Q86XA0	190 aa		13.08	□□□□□ -0.32
CLDND1-223	ENST00000511081	TMC8	Q8IU68	726 aa		13.08	□□□□□ -0.32
CLDND1-223	ENST00000511081	CBWD2	Q8IUF1	395 aa		13.08	□□□□□ -0.32
CLDND1-223	ENST00000511081	THEM5	Q8N1Q8	247 aa		13.08	□□□□□ -0.32
CLDND1-223	ENST00000511081	ELMOD1	Q8N336	334 aa		13.08	□□□□□ -0.32
CLDND1-223	ENST00000511081	CSGALNACT2	Q8N6G5	542 aa		13.08	□□□□□ -0.32
CLDND1-223	ENST00000511081	SPATA18	Q8TC71	538 aa		13.08	□□□□□ -0.32
CLDND1-223	ENST00000511081	C2orf15	Q8WU43	125 aa	Known RBP	13.08	□□□□□ -0.32
CLDND1-223	ENST00000511081	ELSPBP1	Q96BH3	223 aa		13.08	□□□□□ -0.32
CLDND1-223	ENST00000511081	PAGE5	Q96GU1	130 aa		13.08	□□□□□ -0.32
CLDND1-223	ENST00000511081	ZNF560	Q96MR9	790 aa		13.08	□□□□□ -0.32
CLDND1-223	ENST00000511081	PGLYRP2	Q96PD5	576 aa		13.08	□□□□□ -0.32
CLDND1-223	ENST00000511081	PLA2G2F	Q9BZM2	168 aa		13.08	□□□□□ -0.32
CLDND1-223	ENST00000511081	GPR88	Q9GZN0	384 aa		13.08	□□□□□ -0.32
CLDND1-223	ENST00000511081	IRF2BPL	Q9H1B7	796 aa		13.08	□□□□□ -0.32
CLDND1-223	ENST00000511081	SCUBE2	Q9NQ36	999 aa		13.08	□□□□□ -0.32
CLDND1-223	ENST00000511081	AGPAT3	Q9NRZ7	376 aa		13.08	□□□□□ -0.32
CLDND1-223	ENST00000511081	FBXL21	Q9UKT6	434 aa		13.08	□□□□□ -0.32
CLDND1-223	ENST00000511081	SLC27A5	Q9Y2P5	690 aa		13.08	□□□□□ -0.32
CLDND1-223	ENST00000511081	GABRD	O14764	452 aa		13.07	□□□□□ -0.32
CLDND1-223	ENST00000511081	MYL1	P05976	194 aa		13.07	□□□□□ -0.32
CLDND1-223	ENST00000511081	AFM	P43652	599 aa		13.07	□□□□□ -0.32
CLDND1-223	ENST00000511081	ALDH1A3	P47895	512 aa		13.07	□□□□□ -0.32
CLDND1-223	ENST00000511081	TUFM	P49411	452 aa	Known RBP	13.07	□□□□□ -0.32
CLDND1-223	ENST00000511081	EPHB3	P54753	998 aa		13.07	□□□□□ -0.32
CLDND1-223	ENST00000511081	KRT85	P78386	507 aa		13.07	□□□□□ -0.32
CLDND1-223	ENST00000511081	RBP5	P82980	135 aa		13.07	□□□□□ -0.32
CLDND1-223	ENST00000511081	PSMD2	Q13200	908 aa		13.07	□□□□□ -0.32
CLDND1-223	ENST00000511081	DUOXA2	Q1HG44	320 aa		13.07	□□□□□ -0.32
CLDND1-223	ENST00000511081	TANGO2	Q6ICL3	276 aa		13.07	□□□□□ -0.32
CLDND1-223	ENST00000511081	PDZD4	Q76G19	769 aa	Predicted RBP	13.07	□□□□□ -0.32
CLDND1-223	ENST00000511081	DPH6	Q7L8W6	267 aa		13.07	□□□□□ -0.32
CLDND1-223	ENST00000511081	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	13.07	□□□□□ -0.32
CLDND1-223	ENST00000511081	CEP57L1	Q8IYX8	460 aa		13.07	□□□□□ -0.32
CLDND1-223	ENST00000511081	TMEM86A	Q8N2M4	240 aa		13.07	□□□□□ -0.32
CLDND1-223	ENST00000511081	ST13P5	Q8NFI4	369 aa	Predicted RBP	13.07	□□□□□ -0.32
CLDND1-223	ENST00000511081	OR5B17	Q8NGF7	314 aa		13.07	□□□□□ -0.32
CLDND1-223	ENST00000511081	SPPL2B	Q8TCT7	592 aa		13.07	□□□□□ -0.32
CLDND1-223	ENST00000511081	ING5	Q8WYH8	240 aa		13.07	□□□□□ -0.32
CLDND1-223	ENST00000511081	PSMG2	Q969U7	264 aa		13.07	□□□□□ -0.32
CLDND1-223	ENST00000511081	CHAMP1	Q96JM3	812 aa		13.07	□□□□□ -0.32
CLDND1-223	ENST00000511081	SPATA32	Q96LK8	384 aa		13.07	□□□□□ -0.32
CLDND1-223	ENST00000511081	ZSWIM3	Q96MP5	696 aa		13.07	□□□□□ -0.32
CLDND1-223	ENST00000511081	ASB16	Q96NS5	453 aa		13.07	□□□□□ -0.32
CLDND1-223	ENST00000511081	ACBD6	Q9BR61	282 aa		13.07	□□□□□ -0.32
CLDND1-223	ENST00000511081	DDX23	Q9BUQ8	820 aa	Known RBP	13.07	□□□□□ -0.32
CLDND1-223	ENST00000511081	GZF1	Q9H116	711 aa	Predicted RBP	13.07	□□□□□ -0.32
CLDND1-223	ENST00000511081	MFSD1	Q9H3U5	465 aa		13.07	□□□□□ -0.32
CLDND1-223	ENST00000511081	SLC39A2	Q9NP94	309 aa		13.07	□□□□□ -0.32
CLDND1-223	ENST00000511081	DMAC2	Q9NW81	257 aa		13.07	□□□□□ -0.32
CLDND1-223	ENST00000511081	L1RE1	Q9UN81	338 aa		13.07	□□□□□ -0.32
CLDND1-223	ENST00000511081	PTPRJ	Q12913	1337 aa		13.07	□□□□□ -0.32
CLDND1-223	ENST00000511081		A0A1B0GVL5	298 aa		13.06	□□□□□ -0.32
CLDND1-223	ENST00000511081		A0A1W2PQ27	194 aa		13.06	□□□□□ -0.32
CLDND1-223	ENST00000511081		A0A1W2PQ64	194 aa		13.06	□□□□□ -0.32
CLDND1-223	ENST00000511081		A0A1W2PQD8	194 aa		13.06	□□□□□ -0.32
CLDND1-223	ENST00000511081	FAM163B	P0C2L3	166 aa		13.06	□□□□□ -0.32
CLDND1-223	ENST00000511081	PFKFB1	P16118	471 aa		13.06	□□□□□ -0.32
CLDND1-223	ENST00000511081	STK4	Q13043	487 aa		13.06	□□□□□ -0.32
CLDND1-223	ENST00000511081	PSMD6	Q15008	389 aa		13.06	□□□□□ -0.32

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