RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 GRAP2O75791 330 aa15.66■□□□□ 0.1
USP38-202ENST00000510377 ASNSP08243 561 aa15.66■□□□□ 0.1
USP38-202ENST00000510377 GNAT1P11488 350 aa15.66■□□□□ 0.1
USP38-202ENST00000510377 FAM182AQ5T1J6 154 aa15.66■□□□□ 0.1
USP38-202ENST00000510377 FAM71AQ8IYT1 594 aa15.66■□□□□ 0.1
USP38-202ENST00000510377 RTKN2Q8IZC4 609 aa15.66■□□□□ 0.1
USP38-202ENST00000510377 GMCL1Q96IK5 515 aa15.66■□□□□ 0.1
USP38-202ENST00000510377 RNF146Q9NTX7 359 aa15.66■□□□□ 0.1
USP38-202ENST00000510377 NDE1Q9NXR1 346 aa15.66■□□□□ 0.1
USP38-202ENST00000510377 STAMBPO95630 424 aa15.66■□□□□ 0.1
USP38-202ENST00000510377 CDH6P55285 790 aa15.66■□□□□ 0.1
USP38-202ENST00000510377 GEMIN4P57678 1058 aaKnown RBP15.66■□□□□ 0.1
USP38-202ENST00000510377 BAATQ14032 418 aaPredicted RBP15.66■□□□□ 0.1
USP38-202ENST00000510377 MIS18BP1Q6P0N0 1132 aa15.66■□□□□ 0.1
USP38-202ENST00000510377 ZBTB8OSQ8IWT0 167 aa15.66■□□□□ 0.1
USP38-202ENST00000510377 CCDC33Q8N5R6 958 aa15.66■□□□□ 0.1
USP38-202ENST00000510377 NSL1Q96IY1 281 aa15.66■□□□□ 0.1
USP38-202ENST00000510377 RAB6BQ9NRW1 208 aa15.66■□□□□ 0.1
USP38-202ENST00000510377 TRPA1O75762 1119 aa15.65■□□□□ 0.1
USP38-202ENST00000510377 APRTP07741 180 aa15.65■□□□□ 0.1
USP38-202ENST00000510377 RBP3P10745 1247 aa15.65■□□□□ 0.1
USP38-202ENST00000510377 KRT3P12035 628 aa15.65■□□□□ 0.1
USP38-202ENST00000510377 CCND2P30279 289 aa15.65■□□□□ 0.1
USP38-202ENST00000510377 GCLCP48506 637 aaPredicted RBP15.65■□□□□ 0.1
USP38-202ENST00000510377 RPS6P62753 249 aaKnown RBP15.65■□□□□ 0.1
USP38-202ENST00000510377 PTK6Q13882 451 aa15.65■□□□□ 0.1
USP38-202ENST00000510377 TCP10LQ8TDR4 215 aa15.65■□□□□ 0.1
USP38-202ENST00000510377 PAFAH2Q99487 392 aa15.65■□□□□ 0.1
USP38-202ENST00000510377 RANBP17Q9H2T7 1088 aaKnown RBP15.65■□□□□ 0.1
USP38-202ENST00000510377 LRRC19Q9H756 370 aa15.65■□□□□ 0.1
USP38-202ENST00000510377 RNPEPL1Q9HAU8 725 aa15.65■□□□□ 0.1
USP38-202ENST00000510377 A0A1W2PPM1 405 aa15.65■□□□□ 0.1
USP38-202ENST00000510377 PRPSAP2O60256 369 aa15.65■□□□□ 0.1
USP38-202ENST00000510377 BGNP21810 368 aa15.65■□□□□ 0.1
USP38-202ENST00000510377 ZNF699Q32M78 642 aa15.65■□□□□ 0.1
USP38-202ENST00000510377 GPAT2Q6NUI2 795 aa15.65■□□□□ 0.1
USP38-202ENST00000510377 PIP4K2CQ8TBX8 421 aa15.65■□□□□ 0.1
USP38-202ENST00000510377 DEPDC1BQ8WUY9 529 aa15.65■□□□□ 0.1
USP38-202ENST00000510377 HEXIM2Q96MH2 286 aaKnown RBP15.65■□□□□ 0.1
USP38-202ENST00000510377 PIK3CDO00329 1044 aa15.65■□□□□ 0.1
USP38-202ENST00000510377 CALB2P22676 271 aa15.65■□□□□ 0.1
USP38-202ENST00000510377 YARSP54577 528 aaKnown RBP15.65■□□□□ 0.1
USP38-202ENST00000510377 MRPS35P82673 323 aaKnown RBP15.65■□□□□ 0.1
USP38-202ENST00000510377 BNIP1Q12981 228 aa15.65■□□□□ 0.1
USP38-202ENST00000510377 THEMIS2Q5TEJ8 643 aa15.65■□□□□ 0.1
USP38-202ENST00000510377 ATG16L1Q676U5 607 aa15.65■□□□□ 0.1
USP38-202ENST00000510377 CIAPIN1Q6FI81 312 aa15.65■□□□□ 0.1
USP38-202ENST00000510377 AMIGO3Q86WK7 504 aa15.65■□□□□ 0.1
USP38-202ENST00000510377 LRRC6Q86X45 466 aa15.65■□□□□ 0.1
USP38-202ENST00000510377 SLC25A41Q8N5S1 370 aa15.65■□□□□ 0.1
USP38-202ENST00000510377 STK32AQ8WU08 396 aa15.65■□□□□ 0.1
USP38-202ENST00000510377 ZNF75CPQ92670 426 aaPredicted RBP15.65■□□□□ 0.1
USP38-202ENST00000510377 SMYD2Q9NRG4 433 aa15.65■□□□□ 0.1
USP38-202ENST00000510377 MYL2P10916 166 aa15.64■□□□□ 0.09
USP38-202ENST00000510377 TAC1P20366 129 aa15.64■□□□□ 0.09
USP38-202ENST00000510377 CIITAP33076 1130 aa15.64■□□□□ 0.09
USP38-202ENST00000510377 VHLP40337 213 aa15.64■□□□□ 0.09
USP38-202ENST00000510377 TAS2R40P59535 323 aa15.64■□□□□ 0.09
USP38-202ENST00000510377 TRIM72Q6ZMU5 477 aa15.64■□□□□ 0.09
USP38-202ENST00000510377 C7orf31Q8N865 590 aa15.64■□□□□ 0.09
USP38-202ENST00000510377 ACTL9Q8TC94 416 aa15.64■□□□□ 0.09
USP38-202ENST00000510377 ADPGKQ9BRR6 497 aa15.64■□□□□ 0.09
USP38-202ENST00000510377 IVNS1ABPQ9Y6Y0 642 aa15.64■□□□□ 0.09
USP38-202ENST00000510377 BCL9LQ86UU0 1499 aa15.64■□□□□ 0.09
USP38-202ENST00000510377 NUP188Q5SRE5 1749 aa15.64■□□□□ 0.09
USP38-202ENST00000510377 hCG_2014768A0A024R1R8 64 aa15.64■□□□□ 0.09
USP38-202ENST00000510377 PPP1R12AO14974 1030 aaPredicted RBP15.64■□□□□ 0.09
USP38-202ENST00000510377 SERPINB3P29508 390 aa15.64■□□□□ 0.09
USP38-202ENST00000510377 OTUD4Q01804 1114 aaKnown RBP15.64■□□□□ 0.09
USP38-202ENST00000510377 STRIP1Q5VSL9 837 aa15.64■□□□□ 0.09
USP38-202ENST00000510377 PCGF5Q86SE9 256 aa15.64■□□□□ 0.09
USP38-202ENST00000510377 RIBC1Q8N443 379 aaPredicted RBP15.64■□□□□ 0.09
USP38-202ENST00000510377 EMC1Q8N766 993 aa15.64■□□□□ 0.09
USP38-202ENST00000510377 ZDHHC15Q96MV8 337 aa15.64■□□□□ 0.09
USP38-202ENST00000510377 APOL6Q9BWW8 343 aa15.64■□□□□ 0.09
USP38-202ENST00000510377 KIAA1586Q9HCI6 787 aa15.64■□□□□ 0.09
USP38-202ENST00000510377 PCMTD2Q9NV79 361 aa15.64■□□□□ 0.09
USP38-202ENST00000510377 RNF181Q9P0P0 153 aa15.64■□□□□ 0.09
USP38-202ENST00000510377 POLRMTO00411 1230 aaKnown RBP15.64■□□□□ 0.09
USP38-202ENST00000510377 RFC5P40937 340 aa15.64■□□□□ 0.09
USP38-202ENST00000510377 SATB1Q01826 763 aa15.64■□□□□ 0.09
USP38-202ENST00000510377 CYP24A1Q07973 514 aa15.64■□□□□ 0.09
USP38-202ENST00000510377 SPP2Q13103 211 aa15.64■□□□□ 0.09
USP38-202ENST00000510377 FASTKD3Q14CZ7 662 aaKnown RBP15.64■□□□□ 0.09
USP38-202ENST00000510377 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.64■□□□□ 0.09
USP38-202ENST00000510377 SNX30Q5VWJ9 437 aa15.64■□□□□ 0.09
USP38-202ENST00000510377 MAP7D3Q8IWC1 876 aa15.64■□□□□ 0.09
USP38-202ENST00000510377 CDAN1Q8IWY9 1227 aa15.64■□□□□ 0.09
USP38-202ENST00000510377 IL31RAQ8NI17 732 aa15.64■□□□□ 0.09
USP38-202ENST00000510377 SHC3Q92529 594 aa15.64■□□□□ 0.09
USP38-202ENST00000510377 ATXN7L3BQ96GX2 97 aa15.64■□□□□ 0.09
USP38-202ENST00000510377 FAM198AQ9UFP1 575 aa15.64■□□□□ 0.09
USP38-202ENST00000510377 CICQ96RK0 1608 aaPredicted RBP15.64■□□□□ 0.09
USP38-202ENST00000510377 TRIM49D1C9J1S8 452 aa15.63■□□□□ 0.09
USP38-202ENST00000510377 FSCN2O14926 492 aa15.63■□□□□ 0.09
USP38-202ENST00000510377 CCNHP51946 323 aaPredicted RBP15.63■□□□□ 0.09
USP38-202ENST00000510377 YWHAEP62258 255 aaKnown RBP15.63■□□□□ 0.09
USP38-202ENST00000510377 SPIRE1Q08AE8 756 aa15.63■□□□□ 0.09
USP38-202ENST00000510377 FAM102AQ5T9C2 384 aaPredicted RBP15.63■□□□□ 0.09
USP38-202ENST00000510377 VSTM1Q6UX27 236 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms