RNA–Protein interactions for RNA: ENST00000509860.1

PRDM16-205, Transcript of PR/SET domain 16, humanhuman

TSL 5

Gene PRDM16, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-205ENST00000509860 UVRAGQ9P2Y5 699 aa13.28□□□□□ -0.28
PRDM16-205ENST00000509860 PCDHGC3Q9UN70 934 aa13.28□□□□□ -0.28
PRDM16-205ENST00000509860 C17orf102A2RUQ5 167 aa13.27□□□□□ -0.28
PRDM16-205ENST00000509860 EIF4BP23588 611 aaKnown RBP13.27□□□□□ -0.28
PRDM16-205ENST00000509860 AKAP5P24588 427 aa13.27□□□□□ -0.28
PRDM16-205ENST00000509860 CTNNA2P26232 953 aa13.27□□□□□ -0.28
PRDM16-205ENST00000509860 MGAT3Q09327 533 aa13.27□□□□□ -0.28
PRDM16-205ENST00000509860 WDR72Q3MJ13 1102 aa13.27□□□□□ -0.28
PRDM16-205ENST00000509860 XKR4Q5GH76 650 aa13.27□□□□□ -0.28
PRDM16-205ENST00000509860 TMCO3Q6UWJ1 677 aa13.27□□□□□ -0.28
PRDM16-205ENST00000509860 RNPC3Q96LT9 517 aaKnown RBP13.27□□□□□ -0.28
PRDM16-205ENST00000509860 ACAP3Q96P50 834 aa13.27□□□□□ -0.28
PRDM16-205ENST00000509860 RPS6KC1Q96S38 1066 aa13.27□□□□□ -0.28
PRDM16-205ENST00000509860 MEIS3P2A8K0S8 358 aa13.27□□□□□ -0.29
PRDM16-205ENST00000509860 HCRTO43612 131 aa13.27□□□□□ -0.29
PRDM16-205ENST00000509860 KRT19P08727 400 aa13.27□□□□□ -0.29
PRDM16-205ENST00000509860 ELNP15502 786 aa13.27□□□□□ -0.29
PRDM16-205ENST00000509860 SOX4Q06945 474 aaPredicted RBP13.27□□□□□ -0.29
PRDM16-205ENST00000509860 GCOM2Q9BZD3 368 aaPredicted RBP13.27□□□□□ -0.29
PRDM16-205ENST00000509860 GTF2IRD1Q9UHL9 959 aa13.27□□□□□ -0.29
PRDM16-205ENST00000509860 LCMT1Q9UIC8 334 aa13.27□□□□□ -0.29
PRDM16-205ENST00000509860 LAMA2P24043 3122 aaKnown RBP13.27□□□□□ -0.29
PRDM16-205ENST00000509860 ESYT3A0FGR9 886 aa13.27□□□□□ -0.29
PRDM16-205ENST00000509860 FCGRTP55899 365 aa13.27□□□□□ -0.29
PRDM16-205ENST00000509860 RPL7AP62424 266 aaKnown RBP13.27□□□□□ -0.29
PRDM16-205ENST00000509860 TRPC3Q13507 836 aa13.27□□□□□ -0.29
PRDM16-205ENST00000509860 CARD9Q9H257 536 aa13.27□□□□□ -0.29
PRDM16-205ENST00000509860 DPP3Q9NY33 737 aa13.27□□□□□ -0.29
PRDM16-205ENST00000509860 PGRMC1O00264 195 aaKnown RBP13.26□□□□□ -0.29
PRDM16-205ENST00000509860 STAU1O95793 577 aaKnown RBP13.26□□□□□ -0.29
PRDM16-205ENST00000509860 CHRNA1P02708 482 aa13.26□□□□□ -0.29
PRDM16-205ENST00000509860 C6orf222P0C671 652 aaPredicted RBP13.26□□□□□ -0.29
PRDM16-205ENST00000509860 TNFRSF8P28908 595 aa13.26□□□□□ -0.29
PRDM16-205ENST00000509860 BPIFB4P59827 614 aa13.26□□□□□ -0.29
PRDM16-205ENST00000509860 INCA1Q0VD86 236 aa13.26□□□□□ -0.29
PRDM16-205ENST00000509860 DCAF4L1Q3SXM0 396 aa13.26□□□□□ -0.29
PRDM16-205ENST00000509860 GLRA4Q5JXX5 417 aa13.26□□□□□ -0.29
PRDM16-205ENST00000509860 CCDC181Q5TID7 509 aa13.26□□□□□ -0.29
PRDM16-205ENST00000509860 KLHDC9Q8NEP7 349 aa13.26□□□□□ -0.29
PRDM16-205ENST00000509860 CASKIN2Q8WXE0 1202 aa13.26□□□□□ -0.29
PRDM16-205ENST00000509860 TAF4BQ92750 862 aa13.26□□□□□ -0.29
PRDM16-205ENST00000509860 AP5M1Q9H0R1 490 aa13.26□□□□□ -0.29
PRDM16-205ENST00000509860 DONSONQ9NYP3 566 aa13.26□□□□□ -0.29
PRDM16-205ENST00000509860 PCDHA3Q9Y5H8 950 aa13.26□□□□□ -0.29
PRDM16-205ENST00000509860 PFKMP08237 780 aa13.26□□□□□ -0.29
PRDM16-205ENST00000509860 SCLT1Q96NL6 688 aa13.26□□□□□ -0.29
PRDM16-205ENST00000509860 DDX47Q9H0S4 455 aaKnown RBP13.26□□□□□ -0.29
PRDM16-205ENST00000509860 GPBP1L1Q9HC44 474 aaPredicted RBP13.26□□□□□ -0.29
PRDM16-205ENST00000509860 STIM2Q9P246 746 aa13.26□□□□□ -0.29
PRDM16-205ENST00000509860 ITGA11Q9UKX5 1188 aa13.26□□□□□ -0.29
PRDM16-205ENST00000509860 H3BQF6 201 aa13.26□□□□□ -0.29
PRDM16-205ENST00000509860 MYO1CO00159 1063 aa13.26□□□□□ -0.29
PRDM16-205ENST00000509860 SPTLC1O15269 473 aa13.26□□□□□ -0.29
PRDM16-205ENST00000509860 RECQL4O94761 1208 aa13.26□□□□□ -0.29
PRDM16-205ENST00000509860 FGGP02679 453 aa13.26□□□□□ -0.29
PRDM16-205ENST00000509860 TAS2R40P59535 323 aa13.26□□□□□ -0.29
PRDM16-205ENST00000509860 CATSPER4Q7RTX7 472 aa13.26□□□□□ -0.29
PRDM16-205ENST00000509860 HPDLQ96IR7 371 aa13.26□□□□□ -0.29
PRDM16-205ENST00000509860 LPIN3Q9BQK8 851 aa13.26□□□□□ -0.29
PRDM16-205ENST00000509860 NEUROG2Q9H2A3 272 aa13.26□□□□□ -0.29
PRDM16-205ENST00000509860 ARFGAP3Q9NP61 516 aa13.26□□□□□ -0.29
PRDM16-205ENST00000509860 ANAPC7Q9UJX3 599 aa13.26□□□□□ -0.29
PRDM16-205ENST00000509860 AGAP1Q9UPQ3 857 aa13.26□□□□□ -0.29
PRDM16-205ENST00000509860 AFF1P51825 1210 aaKnown RBP13.25□□□□□ -0.29
PRDM16-205ENST00000509860 PTPN20Q4JDL3 420 aa13.25□□□□□ -0.29
PRDM16-205ENST00000509860 TTC27Q6P3X3 843 aa13.25□□□□□ -0.29
PRDM16-205ENST00000509860 KIF12Q96FN5 646 aa13.25□□□□□ -0.29
PRDM16-205ENST00000509860 DDX27Q96GQ7 796 aaKnown RBP13.25□□□□□ -0.29
PRDM16-205ENST00000509860 SEPT4O43236 478 aa13.25□□□□□ -0.29
PRDM16-205ENST00000509860 FAM153BP0C7A2 387 aa13.25□□□□□ -0.29
PRDM16-205ENST00000509860 NSFP46459 744 aaKnown RBP13.25□□□□□ -0.29
PRDM16-205ENST00000509860 CARSP49589 748 aaKnown RBP13.25□□□□□ -0.29
PRDM16-205ENST00000509860 CRYBB1P53674 252 aaPredicted RBP13.25□□□□□ -0.29
PRDM16-205ENST00000509860 C1QBPQ07021 282 aaKnown RBP13.25□□□□□ -0.29
PRDM16-205ENST00000509860 FAM153CQ494X1 144 aa13.25□□□□□ -0.29
PRDM16-205ENST00000509860 NOTUMQ6P988 496 aa13.25□□□□□ -0.29
PRDM16-205ENST00000509860 KLHL7Q8IXQ5 586 aa13.25□□□□□ -0.29
PRDM16-205ENST00000509860 MRPL45Q9BRJ2 306 aaKnown RBP13.25□□□□□ -0.29
PRDM16-205ENST00000509860 ARGLU1Q9NWB6 273 aaPredicted RBP13.25□□□□□ -0.29
PRDM16-205ENST00000509860 FAM153AQ9UHL3 310 aa13.25□□□□□ -0.29
PRDM16-205ENST00000509860 GABBR2O75899 941 aa13.25□□□□□ -0.29
PRDM16-205ENST00000509860 ATICP31939 592 aa13.25□□□□□ -0.29
PRDM16-205ENST00000509860 PAFAH1B1P43034 410 aa13.25□□□□□ -0.29
PRDM16-205ENST00000509860 CYP4A22Q5TCH4 519 aa13.25□□□□□ -0.29
PRDM16-205ENST00000509860 MAP3K21Q5TCX8 1036 aa13.25□□□□□ -0.29
PRDM16-205ENST00000509860 TRIM72Q6ZMU5 477 aa13.25□□□□□ -0.29
PRDM16-205ENST00000509860 GSTCDQ8NEC7 633 aa13.25□□□□□ -0.29
PRDM16-205ENST00000509860 CELF4Q9BZC1 486 aaKnown RBP13.25□□□□□ -0.29
PRDM16-205ENST00000509860 IMPG2Q9BZV3 1241 aa13.25□□□□□ -0.29
PRDM16-205ENST00000509860 SENP6Q9GZR1 1112 aaPredicted RBP13.25□□□□□ -0.29
PRDM16-205ENST00000509860 GOLGA2P5Q9HBQ8 144 aa13.25□□□□□ -0.29
PRDM16-205ENST00000509860 MYBL1P10243 752 aa13.24□□□□□ -0.29
PRDM16-205ENST00000509860 GNASQ5JWF2 1037 aa13.24□□□□□ -0.29
PRDM16-205ENST00000509860 LIMS2Q7Z4I7 341 aa13.24□□□□□ -0.29
PRDM16-205ENST00000509860 ADAT2Q7Z6V5 191 aaKnown RBP13.24□□□□□ -0.29
PRDM16-205ENST00000509860 ARFGAP1Q8N6T3 406 aa13.24□□□□□ -0.29
PRDM16-205ENST00000509860 PRELID2Q8N945 189 aa13.24□□□□□ -0.29
PRDM16-205ENST00000509860 FAXDC2Q96IV6 333 aa13.24□□□□□ -0.29
PRDM16-205ENST00000509860 KLK14Q9P0G3 267 aa13.24□□□□□ -0.29
PRDM16-205ENST00000509860 ADAM22Q9P0K1 906 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms