RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 FAM189A1O60320 539 aa15.8■□□□□ 0.12
HMGCL-208ENST00000509389 OAZ2O95190 189 aa15.8■□□□□ 0.12
HMGCL-208ENST00000509389 PIGRP01833 764 aa15.8■□□□□ 0.12
HMGCL-208ENST00000509389 CPB1P15086 417 aa15.8■□□□□ 0.12
HMGCL-208ENST00000509389 CYP3A5P20815 502 aa15.8■□□□□ 0.12
HMGCL-208ENST00000509389 AARSP49588 968 aaKnown RBP eCLIP15.8■□□□□ 0.12
HMGCL-208ENST00000509389 ZNF165P49910 485 aa15.8■□□□□ 0.12
HMGCL-208ENST00000509389 ZNF131P52739 623 aa15.8■□□□□ 0.12
HMGCL-208ENST00000509389 YWHAHQ04917 246 aaPredicted RBP15.8■□□□□ 0.12
HMGCL-208ENST00000509389 PPP2R3AQ06190 1150 aa15.8■□□□□ 0.12
HMGCL-208ENST00000509389 TWF1Q12792 350 aa15.8■□□□□ 0.12
HMGCL-208ENST00000509389 ENOX2Q16206 610 aaKnown RBP15.8■□□□□ 0.12
HMGCL-208ENST00000509389 FAM78AQ5JUQ0 283 aa15.8■□□□□ 0.12
HMGCL-208ENST00000509389 L1TD1Q5T7N2 865 aaKnown RBP15.8■□□□□ 0.12
HMGCL-208ENST00000509389 CYP4A22Q5TCH4 519 aa15.8■□□□□ 0.12
HMGCL-208ENST00000509389 UNC13DQ70J99 1090 aa15.8■□□□□ 0.12
HMGCL-208ENST00000509389 ELMOD1Q8N336 334 aa15.8■□□□□ 0.12
HMGCL-208ENST00000509389 MYCT1Q8N699 235 aa15.8■□□□□ 0.12
HMGCL-208ENST00000509389 ZNF512Q96ME7 567 aaPredicted RBP15.8■□□□□ 0.12
HMGCL-208ENST00000509389 GTPBP4Q9BZE4 634 aaKnown RBP15.8■□□□□ 0.12
HMGCL-208ENST00000509389 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.8■□□□□ 0.12
HMGCL-208ENST00000509389 K7ENM7 598 aa15.79■□□□□ 0.12
HMGCL-208ENST00000509389 BIN1O00499 593 aa15.79■□□□□ 0.12
HMGCL-208ENST00000509389 HNRNPDLO14979 420 aaKnown RBP15.79■□□□□ 0.12
HMGCL-208ENST00000509389 OGTO15294 1046 aa15.79■□□□□ 0.12
HMGCL-208ENST00000509389 MOSPD3O75425 235 aa15.79■□□□□ 0.12
HMGCL-208ENST00000509389 FAM13AO94988 1023 aa15.79■□□□□ 0.12
HMGCL-208ENST00000509389 ADRB2P07550 413 aa15.79■□□□□ 0.12
HMGCL-208ENST00000509389 GUCY2FP51841 1108 aa15.79■□□□□ 0.12
HMGCL-208ENST00000509389 KYAT1Q16773 422 aa15.79■□□□□ 0.12
HMGCL-208ENST00000509389 ZNF658Q5TYW1 1059 aaPredicted RBP15.79■□□□□ 0.12
HMGCL-208ENST00000509389 IQCEQ6IPM2 695 aa15.79■□□□□ 0.12
HMGCL-208ENST00000509389 ZC3H14Q6PJT7 736 aaKnown RBP15.79■□□□□ 0.12
HMGCL-208ENST00000509389 TPRG1Q6ZUI0 275 aa15.79■□□□□ 0.12
HMGCL-208ENST00000509389 DHX40Q8IX18 779 aaKnown RBP15.79■□□□□ 0.12
HMGCL-208ENST00000509389 BEST2Q8NFU1 509 aa15.79■□□□□ 0.12
HMGCL-208ENST00000509389 ZSWIM3Q96MP5 696 aa15.79■□□□□ 0.12
HMGCL-208ENST00000509389 ASB16Q96NS5 453 aa15.79■□□□□ 0.12
HMGCL-208ENST00000509389 PARVGQ9HBI0 331 aa15.79■□□□□ 0.12
HMGCL-208ENST00000509389 ZFP14Q9HCL3 533 aa15.79■□□□□ 0.12
HMGCL-208ENST00000509389 HEBP1Q9NRV9 189 aa15.79■□□□□ 0.12
HMGCL-208ENST00000509389 SPATA6Q9NWH7 488 aaPredicted RBP15.79■□□□□ 0.12
HMGCL-208ENST00000509389 OTOGLQ3ZCN5 2332 aa15.79■□□□□ 0.12
HMGCL-208ENST00000509389 ANK1P16157 1881 aa15.79■□□□□ 0.12
HMGCL-208ENST00000509389 F5P12259 2224 aa15.79■□□□□ 0.12
HMGCL-208ENST00000509389 A0A0B4J269 797 aa15.78■□□□□ 0.12
HMGCL-208ENST00000509389 PPEF2O14830 753 aa15.78■□□□□ 0.12
HMGCL-208ENST00000509389 IKBKBO14920 756 aa15.78■□□□□ 0.12
HMGCL-208ENST00000509389 XPOTO43592 962 aaKnown RBP15.78■□□□□ 0.12
HMGCL-208ENST00000509389 VNN2O95498 520 aa15.78■□□□□ 0.12
HMGCL-208ENST00000509389 OR4Q2P0C623 313 aa15.78■□□□□ 0.12
HMGCL-208ENST00000509389 MYL4P12829 197 aa15.78■□□□□ 0.12
HMGCL-208ENST00000509389 SCP2P22307 547 aa15.78■□□□□ 0.12
HMGCL-208ENST00000509389 TARSP26639 723 aaKnown RBP15.78■□□□□ 0.12
HMGCL-208ENST00000509389 EPHA5P54756 1037 aa15.78■□□□□ 0.12
HMGCL-208ENST00000509389 GRM2Q14416 872 aa15.78■□□□□ 0.12
HMGCL-208ENST00000509389 NCAPHQ15003 741 aa15.78■□□□□ 0.12
HMGCL-208ENST00000509389 KMT5BQ4FZB7 885 aa15.78■□□□□ 0.12
HMGCL-208ENST00000509389 SLC39A4Q6P5W5 647 aa15.78■□□□□ 0.12
HMGCL-208ENST00000509389 DSTYKQ6XUX3 929 aa15.78■□□□□ 0.12
HMGCL-208ENST00000509389 DNASE1L2Q92874 299 aa15.78■□□□□ 0.12
HMGCL-208ENST00000509389 FIZ1Q96SL8 496 aa15.78■□□□□ 0.12
HMGCL-208ENST00000509389 NELL2Q99435 816 aa15.78■□□□□ 0.12
HMGCL-208ENST00000509389 OXCT2Q9BYC2 517 aaPredicted RBP15.78■□□□□ 0.12
HMGCL-208ENST00000509389 NAT10Q9H0A0 1025 aaKnown RBP15.78■□□□□ 0.12
HMGCL-208ENST00000509389 RPF1Q9H9Y2 349 aaKnown RBP15.78■□□□□ 0.12
HMGCL-208ENST00000509389 YIPF1Q9Y548 306 aa15.78■□□□□ 0.12
HMGCL-208ENST00000509389 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.77■□□□□ 0.12
HMGCL-208ENST00000509389 SHISA7A6NL88 538 aa15.77■□□□□ 0.12
HMGCL-208ENST00000509389 LAMTOR5O43504 91 aa15.77■□□□□ 0.12
HMGCL-208ENST00000509389 KRT18P05783 430 aaKnown RBP15.77■□□□□ 0.12
HMGCL-208ENST00000509389 GJA1P17302 382 aa15.77■□□□□ 0.12
HMGCL-208ENST00000509389 NMT1P30419 496 aaKnown RBP15.77■□□□□ 0.12
HMGCL-208ENST00000509389 MAGEA9P43362 315 aa15.77■□□□□ 0.12
HMGCL-208ENST00000509389 SPATA1Q5VX52 437 aa15.77■□□□□ 0.12
HMGCL-208ENST00000509389 JADE1Q6IE81 842 aa15.77■□□□□ 0.12
HMGCL-208ENST00000509389 ZNF852Q6ZMS4 543 aa15.77■□□□□ 0.12
HMGCL-208ENST00000509389 USP37Q86T82 979 aa15.77■□□□□ 0.12
HMGCL-208ENST00000509389 LEMD2Q8NC56 503 aa15.77■□□□□ 0.12
HMGCL-208ENST00000509389 RNF214Q8ND24 703 aa15.77■□□□□ 0.12
HMGCL-208ENST00000509389 SMARCD2Q92925 531 aa15.77■□□□□ 0.12
HMGCL-208ENST00000509389 CLDN23Q96B33 292 aa15.77■□□□□ 0.12
HMGCL-208ENST00000509389 FAM212AQ96EL1 285 aa15.77■□□□□ 0.12
HMGCL-208ENST00000509389 PGLYRP2Q96PD5 576 aa15.77■□□□□ 0.12
HMGCL-208ENST00000509389 MED15Q96RN5 788 aa15.77■□□□□ 0.12
HMGCL-208ENST00000509389 TSPAN18Q96SJ8 248 aa15.77■□□□□ 0.12
HMGCL-208ENST00000509389 MSTO1Q9BUK6 570 aa15.77■□□□□ 0.12
HMGCL-208ENST00000509389 CRISPLD1Q9H336 500 aa15.77■□□□□ 0.12
HMGCL-208ENST00000509389 ZHX3Q9H4I2 956 aa15.77■□□□□ 0.12
HMGCL-208ENST00000509389 BRD9Q9H8M2 597 aa15.77■□□□□ 0.12
HMGCL-208ENST00000509389 ASAH2Q9NR71 780 aa15.77■□□□□ 0.12
HMGCL-208ENST00000509389 DACH1Q9UI36 760 aa15.77■□□□□ 0.12
HMGCL-208ENST00000509389 CPSF3Q9UKF6 684 aaKnown RBP15.77■□□□□ 0.12
HMGCL-208ENST00000509389 FBXO4Q9UKT5 387 aa15.77■□□□□ 0.12
HMGCL-208ENST00000509389 COL4A2P08572 1712 aa15.77■□□□□ 0.12
HMGCL-208ENST00000509389 TICRRQ7Z2Z1 1910 aa15.77■□□□□ 0.11
HMGCL-208ENST00000509389 OR6C75A6NL08 312 aa15.76■□□□□ 0.11
HMGCL-208ENST00000509389 PPP1R3GB7ZBB8 358 aa15.76■□□□□ 0.11
HMGCL-208ENST00000509389 CD44P16070 742 aaKnown RBP15.76■□□□□ 0.11
HMGCL-208ENST00000509389 ERCC5P28715 1186 aaPredicted RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms