RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 ZP2Q05996 745 aa11.39□□□□□ -0.59
POLR2J3-213ENST00000508848 BFSP1Q12934 665 aa11.39□□□□□ -0.59
POLR2J3-213ENST00000508848 NFE2Q16621 373 aaPredicted RBP11.39□□□□□ -0.59
POLR2J3-213ENST00000508848 C1orf220Q5T0J3 134 aa11.39□□□□□ -0.59
POLR2J3-213ENST00000508848 LIN9Q5TKA1 542 aa11.39□□□□□ -0.59
POLR2J3-213ENST00000508848 TTI2Q6NXR4 508 aa11.39□□□□□ -0.59
POLR2J3-213ENST00000508848 RBM43Q6ZSC3 357 aaKnown RBP11.39□□□□□ -0.59
POLR2J3-213ENST00000508848 EP400NLQ6ZTU2 488 aa11.39□□□□□ -0.59
POLR2J3-213ENST00000508848 SV2AQ7L0J3 742 aa11.39□□□□□ -0.59
POLR2J3-213ENST00000508848 FRMD5Q7Z6J6 570 aa11.39□□□□□ -0.59
POLR2J3-213ENST00000508848 FAM186BQ8IYM0 893 aa11.39□□□□□ -0.59
POLR2J3-213ENST00000508848 PLCD3Q8N3E9 789 aa11.39□□□□□ -0.59
POLR2J3-213ENST00000508848 ADAMTS19Q8TE59 1207 aa11.39□□□□□ -0.59
POLR2J3-213ENST00000508848 CCDC127Q96BQ5 260 aa11.39□□□□□ -0.59
POLR2J3-213ENST00000508848 ZNF707Q96C28 371 aaPredicted RBP11.39□□□□□ -0.59
POLR2J3-213ENST00000508848 XYLT2Q9H1B5 865 aa11.39□□□□□ -0.59
POLR2J3-213ENST00000508848 WDR6Q9NNW5 1121 aaKnown RBP11.39□□□□□ -0.59
POLR2J3-213ENST00000508848 ABCB6Q9NP58 842 aa11.39□□□□□ -0.59
POLR2J3-213ENST00000508848 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.39□□□□□ -0.59
POLR2J3-213ENST00000508848 MAPK8IP1Q9UQF2 711 aa11.39□□□□□ -0.59
POLR2J3-213ENST00000508848 COQ4Q9Y3A0 265 aa11.39□□□□□ -0.59
POLR2J3-213ENST00000508848 NR2E1Q9Y466 385 aa11.39□□□□□ -0.59
POLR2J3-213ENST00000508848 ASB3Q9Y575 518 aa11.39□□□□□ -0.59
POLR2J3-213ENST00000508848 WDR27A2RRH5 827 aa11.38□□□□□ -0.59
POLR2J3-213ENST00000508848 LRRIQ3A6PVS8 624 aaPredicted RBP11.38□□□□□ -0.59
POLR2J3-213ENST00000508848 MBD3O95983 291 aa11.38□□□□□ -0.59
POLR2J3-213ENST00000508848 EPB41P11171 864 aaKnown RBP11.38□□□□□ -0.59
POLR2J3-213ENST00000508848 RPL17P18621 184 aaKnown RBP11.38□□□□□ -0.59
POLR2J3-213ENST00000508848 WARSP23381 471 aaKnown RBP11.38□□□□□ -0.59
POLR2J3-213ENST00000508848 ERCC5P28715 1186 aaPredicted RBP11.38□□□□□ -0.59
POLR2J3-213ENST00000508848 ELF1P32519 619 aa11.38□□□□□ -0.59
POLR2J3-213ENST00000508848 TUFMP49411 452 aaKnown RBP11.38□□□□□ -0.59
POLR2J3-213ENST00000508848 TRPC3Q13507 836 aa11.38□□□□□ -0.59
POLR2J3-213ENST00000508848 SOWAHAQ2M3V2 549 aa11.38□□□□□ -0.59
POLR2J3-213ENST00000508848 WSCD1Q658N2 575 aa11.38□□□□□ -0.59
POLR2J3-213ENST00000508848 CEP135Q66GS9 1140 aa11.38□□□□□ -0.59
POLR2J3-213ENST00000508848 LLGL2Q6P1M3 1020 aa11.38□□□□□ -0.59
POLR2J3-213ENST00000508848 DCP1BQ8IZD4 617 aaKnown RBP11.38□□□□□ -0.59
POLR2J3-213ENST00000508848 ZDHHC14Q8IZN3 488 aa11.38□□□□□ -0.59
POLR2J3-213ENST00000508848 PDCL2Q8N4E4 241 aa11.38□□□□□ -0.59
POLR2J3-213ENST00000508848 TTC39CQ8N584 583 aa11.38□□□□□ -0.59
POLR2J3-213ENST00000508848 LEMD2Q8NC56 503 aa11.38□□□□□ -0.59
POLR2J3-213ENST00000508848 SPPL2BQ8TCT7 592 aa11.38□□□□□ -0.59
POLR2J3-213ENST00000508848 NXPE3Q969Y0 559 aa11.38□□□□□ -0.59
POLR2J3-213ENST00000508848 UHRF1Q96T88 793 aaPredicted RBP11.38□□□□□ -0.59
POLR2J3-213ENST00000508848 ZCWPW1Q9H0M4 648 aa11.38□□□□□ -0.59
POLR2J3-213ENST00000508848 RWDD2AQ9UIY3 292 aa11.38□□□□□ -0.59
POLR2J3-213ENST00000508848 P4HA2O15460 535 aa11.37□□□□□ -0.59
POLR2J3-213ENST00000508848 ASS1P00966 412 aaKnown RBP11.37□□□□□ -0.59
POLR2J3-213ENST00000508848 C8AP07357 584 aa11.37□□□□□ -0.59
POLR2J3-213ENST00000508848 P4HA1P13674 534 aa11.37□□□□□ -0.59
POLR2J3-213ENST00000508848 IL9P15248 144 aa11.37□□□□□ -0.59
POLR2J3-213ENST00000508848 CD44P16070 742 aaKnown RBP11.37□□□□□ -0.59
POLR2J3-213ENST00000508848 EPHA5P54756 1037 aa11.37□□□□□ -0.59
POLR2J3-213ENST00000508848 MYL7Q01449 175 aa11.37□□□□□ -0.59
POLR2J3-213ENST00000508848 PLD1Q13393 1074 aa11.37□□□□□ -0.59
POLR2J3-213ENST00000508848 NCOA4Q13772 614 aa11.37□□□□□ -0.59
POLR2J3-213ENST00000508848 MAPRE1Q15691 268 aaKnown RBP11.37□□□□□ -0.59
POLR2J3-213ENST00000508848 PPM1LQ5SGD2 360 aa11.37□□□□□ -0.59
POLR2J3-213ENST00000508848 RARS2Q5T160 578 aaKnown RBP11.37□□□□□ -0.59
POLR2J3-213ENST00000508848 TDRD10Q5VZ19 366 aaKnown RBP11.37□□□□□ -0.59
POLR2J3-213ENST00000508848 FAM171BQ6P995 826 aa11.37□□□□□ -0.59
POLR2J3-213ENST00000508848 OTOP3Q7RTS5 596 aa11.37□□□□□ -0.59
POLR2J3-213ENST00000508848 SMYD4Q8IYR2 804 aaPredicted RBP11.37□□□□□ -0.59
POLR2J3-213ENST00000508848 NOC3LQ8WTT2 800 aaKnown RBP11.37□□□□□ -0.59
POLR2J3-213ENST00000508848 FUBP3Q96I24 572 aaKnown RBP eCLIP11.37□□□□□ -0.59
POLR2J3-213ENST00000508848 DUSP9Q99956 384 aaKnown RBP11.37□□□□□ -0.59
POLR2J3-213ENST00000508848 RTP3Q9BQQ7 232 aa11.37□□□□□ -0.59
POLR2J3-213ENST00000508848 COL25A1Q9BXS0 654 aaPredicted RBP11.37□□□□□ -0.59
POLR2J3-213ENST00000508848 NUP62CLQ9H1M0 184 aa11.37□□□□□ -0.59
POLR2J3-213ENST00000508848 TMEM8AQ9HCN3 771 aa11.37□□□□□ -0.59
POLR2J3-213ENST00000508848 ARMCX3Q9UH62 379 aaPredicted RBP11.37□□□□□ -0.59
POLR2J3-213ENST00000508848 L1RE1Q9UN81 338 aa11.37□□□□□ -0.59
POLR2J3-213ENST00000508848 SNX9Q9Y5X1 595 aa11.37□□□□□ -0.59
POLR2J3-213ENST00000508848 PTPRDP23468 1912 aa11.37□□□□□ -0.59
POLR2J3-213ENST00000508848 DENND4CQ5VZ89 1909 aa11.37□□□□□ -0.59
POLR2J3-213ENST00000508848 SOBPA7XYQ1 873 aa11.36□□□□□ -0.59
POLR2J3-213ENST00000508848 PHACTR2O75167 634 aa11.36□□□□□ -0.59
POLR2J3-213ENST00000508848 CSPG5O95196 566 aa11.36□□□□□ -0.59
POLR2J3-213ENST00000508848 VNN1O95497 513 aa11.36□□□□□ -0.59
POLR2J3-213ENST00000508848 KRT19P08727 400 aa11.36□□□□□ -0.59
POLR2J3-213ENST00000508848 MAGEA11P43364 429 aa11.36□□□□□ -0.59
POLR2J3-213ENST00000508848 PMS1P54277 932 aaKnown RBP11.36□□□□□ -0.59
POLR2J3-213ENST00000508848 DLG4P78352 724 aa11.36□□□□□ -0.59
POLR2J3-213ENST00000508848 TSPY1Q01534 308 aa11.36□□□□□ -0.59
POLR2J3-213ENST00000508848 ADCY1Q08828 1119 aa11.36□□□□□ -0.59
POLR2J3-213ENST00000508848 PAK1Q13153 545 aa11.36□□□□□ -0.59
POLR2J3-213ENST00000508848 WDR72Q3MJ13 1102 aa11.36□□□□□ -0.59
POLR2J3-213ENST00000508848 CFAP221Q4G0U5 840 aa11.36□□□□□ -0.59
POLR2J3-213ENST00000508848 KRT39Q6A163 491 aa11.36□□□□□ -0.59
POLR2J3-213ENST00000508848 TMC5Q6UXY8 1006 aa11.36□□□□□ -0.59
POLR2J3-213ENST00000508848 UNC93AQ86WB7 457 aa11.36□□□□□ -0.59
POLR2J3-213ENST00000508848 GJD3Q8N144 294 aa11.36□□□□□ -0.59
POLR2J3-213ENST00000508848 SMG7Q92540 1137 aaKnown RBP11.36□□□□□ -0.59
POLR2J3-213ENST00000508848 ERCC4Q92889 916 aaPredicted RBP11.36□□□□□ -0.59
POLR2J3-213ENST00000508848 PKMYT1Q99640 499 aa11.36□□□□□ -0.59
POLR2J3-213ENST00000508848 POMKQ9H5K3 350 aa11.36□□□□□ -0.59
POLR2J3-213ENST00000508848 CYP3A43Q9HB55 503 aa11.36□□□□□ -0.59
POLR2J3-213ENST00000508848 DACH1Q9UI36 760 aa11.36□□□□□ -0.59
POLR2J3-213ENST00000508848 ZMYM5Q9UJ78 669 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms