RNA–Protein interactions for RNA: ENST00000508836.1

C4orf46-203, Transcript of chromosome 4 open reading frame 46, humanhuman

TSL 1 (best)

Gene C4orf46, Length 1,103 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf46-203ENST00000508836 MCM2P49736 904 aa11.9□□□□□ -0.5
C4orf46-203ENST00000508836 DMC1Q14565 340 aa11.9□□□□□ -0.5
C4orf46-203ENST00000508836 MAPK6Q16659 721 aa11.9□□□□□ -0.5
C4orf46-203ENST00000508836 DCAF4L1Q3SXM0 396 aa11.9□□□□□ -0.5
C4orf46-203ENST00000508836 USP39Q53GS9 565 aaKnown RBP11.9□□□□□ -0.5
C4orf46-203ENST00000508836 ARHGAP15Q53QZ3 475 aa11.9□□□□□ -0.5
C4orf46-203ENST00000508836 TRIM61Q5EBN2 209 aa11.9□□□□□ -0.5
C4orf46-203ENST00000508836 GAREM2Q75VX8 874 aa11.9□□□□□ -0.5
C4orf46-203ENST00000508836 SYT13Q7L8C5 426 aa11.9□□□□□ -0.5
C4orf46-203ENST00000508836 RPLP0P6Q8NHW5 317 aa11.9□□□□□ -0.5
C4orf46-203ENST00000508836 HNRNPLLQ8WVV9 542 aaKnown RBP11.9□□□□□ -0.5
C4orf46-203ENST00000508836 HAS1Q92839 578 aa11.9□□□□□ -0.5
C4orf46-203ENST00000508836 CHFRQ96EP1 664 aa11.9□□□□□ -0.5
C4orf46-203ENST00000508836 LRIG1Q96JA1 1093 aa11.9□□□□□ -0.5
C4orf46-203ENST00000508836 NUSAP1Q9BXS6 441 aaKnown RBP11.9□□□□□ -0.5
C4orf46-203ENST00000508836 TPSD1Q9BZJ3 242 aa11.9□□□□□ -0.5
C4orf46-203ENST00000508836 DNAJC25Q9H1X3 360 aa11.9□□□□□ -0.5
C4orf46-203ENST00000508836 CCDC86Q9H6F5 360 aaKnown RBP11.9□□□□□ -0.5
C4orf46-203ENST00000508836 GKN1Q9NS71 199 aa11.9□□□□□ -0.5
C4orf46-203ENST00000508836 ANKEF1Q9NU02 776 aa11.9□□□□□ -0.5
C4orf46-203ENST00000508836 EVLQ9UI08 416 aaPredicted RBP11.9□□□□□ -0.5
C4orf46-203ENST00000508836 MYO16Q9Y6X6 1858 aa11.9□□□□□ -0.5
C4orf46-203ENST00000508836 NID2Q14112 1375 aa11.9□□□□□ -0.5
C4orf46-203ENST00000508836 CITO14578 2027 aa11.89□□□□□ -0.51
C4orf46-203ENST00000508836 GOLGA4Q13439 2230 aaKnown RBP11.89□□□□□ -0.51
C4orf46-203ENST00000508836 BPTFQ12830 3046 aa11.89□□□□□ -0.51
C4orf46-203ENST00000508836 SMIM28A0A1B0GU29 152 aa11.89□□□□□ -0.51
C4orf46-203ENST00000508836 M0R2N6 131 aa11.89□□□□□ -0.51
C4orf46-203ENST00000508836 EDN1P05305 212 aa11.89□□□□□ -0.51
C4orf46-203ENST00000508836 DRD1P21728 446 aa11.89□□□□□ -0.51
C4orf46-203ENST00000508836 GABRR2P28476 465 aa11.89□□□□□ -0.51
C4orf46-203ENST00000508836 RARRES1P49788 294 aa11.89□□□□□ -0.51
C4orf46-203ENST00000508836 EPHB3P54753 998 aa11.89□□□□□ -0.51
C4orf46-203ENST00000508836 SEMA3BQ13214 749 aa11.89□□□□□ -0.51
C4orf46-203ENST00000508836 RUNX3Q13761 415 aa11.89□□□□□ -0.51
C4orf46-203ENST00000508836 Q6ZUG5 572 aa11.89□□□□□ -0.51
C4orf46-203ENST00000508836 KRT25Q7Z3Z0 450 aa11.89□□□□□ -0.51
C4orf46-203ENST00000508836 RAB44Q7Z6P3 723 aaPredicted RBP11.89□□□□□ -0.51
C4orf46-203ENST00000508836 PIP4P1Q86T03 277 aa11.89□□□□□ -0.51
C4orf46-203ENST00000508836 LAPTM4BQ86VI4 370 aa11.89□□□□□ -0.51
C4orf46-203ENST00000508836 APPL2Q8NEU8 664 aa11.89□□□□□ -0.51
C4orf46-203ENST00000508836 TSTD1Q8NFU3 115 aa11.89□□□□□ -0.51
C4orf46-203ENST00000508836 BRF1Q92994 677 aa11.89□□□□□ -0.51
C4orf46-203ENST00000508836 TATDN2Q93075 761 aa11.89□□□□□ -0.51
C4orf46-203ENST00000508836 ACDQ96AP0 544 aa11.89□□□□□ -0.51
C4orf46-203ENST00000508836 PGLYRP2Q96PD5 576 aa11.89□□□□□ -0.51
C4orf46-203ENST00000508836 EIF2AK1Q9BQI3 630 aaKnown RBP11.89□□□□□ -0.51
C4orf46-203ENST00000508836 SMG9Q9H0W8 520 aaKnown RBP11.89□□□□□ -0.51
C4orf46-203ENST00000508836 C2orf40Q9H1Z8 148 aa11.89□□□□□ -0.51
C4orf46-203ENST00000508836 EBF3Q9H4W6 596 aa11.89□□□□□ -0.51
C4orf46-203ENST00000508836 FBRSL1Q9HCM7 1045 aaKnown RBP11.89□□□□□ -0.51
C4orf46-203ENST00000508836 HPS4Q9NQG7 708 aa11.89□□□□□ -0.51
C4orf46-203ENST00000508836 PLXNB3Q9ULL4 1909 aa11.89□□□□□ -0.51
C4orf46-203ENST00000508836 KIAA1549LQ6ZVL6 1849 aa11.88□□□□□ -0.51
C4orf46-203ENST00000508836 A0A087WWV3 80 aa11.88□□□□□ -0.51
C4orf46-203ENST00000508836 OTOL1A6NHN0 477 aaPredicted RBP11.88□□□□□ -0.51
C4orf46-203ENST00000508836 ACKR2O00590 384 aa11.88□□□□□ -0.51
C4orf46-203ENST00000508836 LYPLA2O95372 231 aa11.88□□□□□ -0.51
C4orf46-203ENST00000508836 OR4Q2P0C623 313 aa11.88□□□□□ -0.51
C4orf46-203ENST00000508836 GCFC2P16383 781 aaKnown RBP11.88□□□□□ -0.51
C4orf46-203ENST00000508836 IFNAR1P17181 557 aa11.88□□□□□ -0.51
C4orf46-203ENST00000508836 ENGP17813 658 aa11.88□□□□□ -0.51
C4orf46-203ENST00000508836 FECHP22830 423 aa11.88□□□□□ -0.51
C4orf46-203ENST00000508836 U2AF2P26368 475 aaKnown RBP eCLIP11.88□□□□□ -0.51
C4orf46-203ENST00000508836 MCM4P33991 863 aa11.88□□□□□ -0.51
C4orf46-203ENST00000508836 ALDH1A3P47895 512 aa11.88□□□□□ -0.51
C4orf46-203ENST00000508836 GALK1P51570 392 aa11.88□□□□□ -0.51
C4orf46-203ENST00000508836 FAM193AP78312 1265 aa11.88□□□□□ -0.51
C4orf46-203ENST00000508836 CYP4F8P98187 520 aa11.88□□□□□ -0.51
C4orf46-203ENST00000508836 AMPD2Q01433 879 aa11.88□□□□□ -0.51
C4orf46-203ENST00000508836 PSMD2Q13200 908 aa11.88□□□□□ -0.51
C4orf46-203ENST00000508836 ZNF423Q2M1K9 1284 aa11.88□□□□□ -0.51
C4orf46-203ENST00000508836 FBXO43Q4G163 708 aa11.88□□□□□ -0.51
C4orf46-203ENST00000508836 DIEXFQ68CQ4 756 aaKnown RBP11.88□□□□□ -0.51
C4orf46-203ENST00000508836 TRIM68Q6AZZ1 485 aa11.88□□□□□ -0.51
C4orf46-203ENST00000508836 NUDT18Q6ZVK8 323 aa11.88□□□□□ -0.51
C4orf46-203ENST00000508836 NEK8Q86SG6 692 aa11.88□□□□□ -0.51
C4orf46-203ENST00000508836 HDDC3Q8N4P3 179 aa11.88□□□□□ -0.51
C4orf46-203ENST00000508836 DAGLBQ8NCG7 672 aa11.88□□□□□ -0.51
C4orf46-203ENST00000508836 BEST2Q8NFU1 509 aa11.88□□□□□ -0.51
C4orf46-203ENST00000508836 PIGOQ8TEQ8 1089 aa11.88□□□□□ -0.51
C4orf46-203ENST00000508836 KCTD12Q96CX2 325 aaKnown RBP11.88□□□□□ -0.51
C4orf46-203ENST00000508836 SUSD3Q96L08 255 aa11.88□□□□□ -0.51
C4orf46-203ENST00000508836 P2RY13Q9BPV8 354 aa11.88□□□□□ -0.51
C4orf46-203ENST00000508836 FAM83CQ9BQN1 747 aa11.88□□□□□ -0.51
C4orf46-203ENST00000508836 CRISPLD1Q9H336 500 aa11.88□□□□□ -0.51
C4orf46-203ENST00000508836 SLC38A7Q9NVC3 462 aa11.88□□□□□ -0.51
C4orf46-203ENST00000508836 CACNA2D2Q9NY47 1150 aa11.88□□□□□ -0.51
C4orf46-203ENST00000508836 RAXQ9Y2V3 346 aa11.88□□□□□ -0.51
C4orf46-203ENST00000508836 TNRC6BQ9UPQ9 1833 aaKnown RBP11.88□□□□□ -0.51
C4orf46-203ENST00000508836 PTPRDP23468 1912 aa11.88□□□□□ -0.51
C4orf46-203ENST00000508836 CYSRT1A8MQ03 144 aa11.87□□□□□ -0.51
C4orf46-203ENST00000508836 UPK3BL1B0FP48 263 aa11.87□□□□□ -0.51
C4orf46-203ENST00000508836 UPK3BL2E5RIL1 263 aa11.87□□□□□ -0.51
C4orf46-203ENST00000508836 CCNT1O60563 726 aaKnown RBP11.87□□□□□ -0.51
C4orf46-203ENST00000508836 VNN2O95498 520 aa11.87□□□□□ -0.51
C4orf46-203ENST00000508836 HMGB1P09429 215 aaKnown RBP11.87□□□□□ -0.51
C4orf46-203ENST00000508836 CPA1P15085 419 aa11.87□□□□□ -0.51
C4orf46-203ENST00000508836 ATXN3P54252 364 aaPredicted RBP11.87□□□□□ -0.51
C4orf46-203ENST00000508836 YARSP54577 528 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms