RNA–Protein interactions for RNA: ENST00000508659.5

CLDND1-219, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 681 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-219ENST00000508659 TWF1Q12792 350 aa18.21■□□□□ 0.51
CLDND1-219ENST00000508659 PLD1Q13393 1074 aa18.21■□□□□ 0.51
CLDND1-219ENST00000508659 PTPN21Q16825 1174 aa18.21■□□□□ 0.51
CLDND1-219ENST00000508659 EDRF1Q3B7T1 1238 aa18.21■□□□□ 0.51
CLDND1-219ENST00000508659 SLC39A12Q504Y0 691 aa18.21■□□□□ 0.51
CLDND1-219ENST00000508659 SPATA18Q8TC71 538 aa18.21■□□□□ 0.51
CLDND1-219ENST00000508659 PARD3BQ8TEW8 1205 aa18.21■□□□□ 0.51
CLDND1-219ENST00000508659 TMEM209Q96SK2 561 aa18.21■□□□□ 0.51
CLDND1-219ENST00000508659 TSG101Q99816 390 aa18.21■□□□□ 0.51
CLDND1-219ENST00000508659 ZCWPW1Q9H0M4 648 aa18.21■□□□□ 0.51
CLDND1-219ENST00000508659 GZF1Q9H116 711 aaPredicted RBP18.21■□□□□ 0.51
CLDND1-219ENST00000508659 HCFC1R1Q9NWW0 138 aa18.21■□□□□ 0.51
CLDND1-219ENST00000508659 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.21■□□□□ 0.51
CLDND1-219ENST00000508659 MAPK13O15264 365 aa18.2■□□□□ 0.5
CLDND1-219ENST00000508659 N4BP1O75113 896 aaKnown RBP18.2■□□□□ 0.5
CLDND1-219ENST00000508659 TNNC1P63316 161 aa18.2■□□□□ 0.5
CLDND1-219ENST00000508659 STIM1Q13586 685 aa18.2■□□□□ 0.5
CLDND1-219ENST00000508659 MTMR3Q13615 1198 aa18.2■□□□□ 0.5
CLDND1-219ENST00000508659 ZCWPW2Q504Y3 356 aa18.2■□□□□ 0.5
CLDND1-219ENST00000508659 COBLL1Q53SF7 1204 aa18.2■□□□□ 0.5
CLDND1-219ENST00000508659 SCARA3Q6AZY7 606 aa18.2■□□□□ 0.5
CLDND1-219ENST00000508659 IQCEQ6IPM2 695 aa18.2■□□□□ 0.5
CLDND1-219ENST00000508659 INTS8Q75QN2 995 aaKnown RBP18.2■□□□□ 0.5
CLDND1-219ENST00000508659 DCP1BQ8IZD4 617 aaKnown RBP18.2■□□□□ 0.5
CLDND1-219ENST00000508659 PLEKHO2Q8TD55 490 aa18.2■□□□□ 0.5
CLDND1-219ENST00000508659 RTP3Q9BQQ7 232 aa18.2■□□□□ 0.5
CLDND1-219ENST00000508659 DDX43Q9NXZ2 648 aaKnown RBP18.2■□□□□ 0.5
CLDND1-219ENST00000508659 SORCS3Q9UPU3 1222 aa18.2■□□□□ 0.5
CLDND1-219ENST00000508659 AKAP3O75969 853 aa18.19■□□□□ 0.5
CLDND1-219ENST00000508659 KRT13P13646 458 aa18.19■□□□□ 0.5
CLDND1-219ENST00000508659 SCN1AP35498 2009 aa18.19■□□□□ 0.5
CLDND1-219ENST00000508659 PRCPP42785 496 aa18.19■□□□□ 0.5
CLDND1-219ENST00000508659 SMARCB1Q12824 385 aa18.19■□□□□ 0.5
CLDND1-219ENST00000508659 DUSP4Q13115 394 aa18.19■□□□□ 0.5
CLDND1-219ENST00000508659 ADAM9Q13443 819 aa18.19■□□□□ 0.5
CLDND1-219ENST00000508659 TDRD10Q5VZ19 366 aaKnown RBP18.19■□□□□ 0.5
CLDND1-219ENST00000508659 FAM186BQ8IYM0 893 aa18.19■□□□□ 0.5
CLDND1-219ENST00000508659 SYAP1Q96A49 352 aaPredicted RBP18.19■□□□□ 0.5
CLDND1-219ENST00000508659 MYADMQ96S97 322 aa18.19■□□□□ 0.5
CLDND1-219ENST00000508659 MMS19Q96T76 1030 aa18.19■□□□□ 0.5
CLDND1-219ENST00000508659 SEPT5Q99719 369 aaPredicted RBP18.19■□□□□ 0.5
CLDND1-219ENST00000508659 CORO1BQ9BR76 489 aa18.19■□□□□ 0.5
CLDND1-219ENST00000508659 EPS15L1Q9UBC2 864 aa18.19■□□□□ 0.5
CLDND1-219ENST00000508659 DNMT3BQ9UBC3 853 aaKnown RBP18.19■□□□□ 0.5
CLDND1-219ENST00000508659 LIMD1Q9UGP4 676 aa18.19■□□□□ 0.5
CLDND1-219ENST00000508659 MTCL1Q9Y4B5 1905 aaKnown RBP18.19■□□□□ 0.5
CLDND1-219ENST00000508659 FAM86C2PA6NEL3 165 aa18.18■□□□□ 0.5
CLDND1-219ENST00000508659 PSMA7O14818 248 aa18.18■□□□□ 0.5
CLDND1-219ENST00000508659 VNN2O95498 520 aa18.18■□□□□ 0.5
CLDND1-219ENST00000508659 ASGR2P07307 311 aa18.18■□□□□ 0.5
CLDND1-219ENST00000508659 RHOP08100 348 aa18.18■□□□□ 0.5
CLDND1-219ENST00000508659 PCSK1P29120 753 aa18.18■□□□□ 0.5
CLDND1-219ENST00000508659 PSMC2P35998 433 aaKnown RBP18.18■□□□□ 0.5
CLDND1-219ENST00000508659 ALDH1A3P47895 512 aa18.18■□□□□ 0.5
CLDND1-219ENST00000508659 LHX1P48742 406 aa18.18■□□□□ 0.5
CLDND1-219ENST00000508659 VAMP7P51809 220 aa18.18■□□□□ 0.5
CLDND1-219ENST00000508659 DLG4P78352 724 aa18.18■□□□□ 0.5
CLDND1-219ENST00000508659 CLDN10P78369 228 aa18.18■□□□□ 0.5
CLDND1-219ENST00000508659 SOWAHAQ2M3V2 549 aa18.18■□□□□ 0.5
CLDND1-219ENST00000508659 ZNF699Q32M78 642 aa18.18■□□□□ 0.5
CLDND1-219ENST00000508659 TMEM31Q5JXX7 168 aa18.18■□□□□ 0.5
CLDND1-219ENST00000508659 CENPPQ6IPU0 288 aa18.18■□□□□ 0.5
CLDND1-219ENST00000508659 PDZD4Q76G19 769 aaPredicted RBP18.18■□□□□ 0.5
CLDND1-219ENST00000508659 DPH6Q7L8W6 267 aa18.18■□□□□ 0.5
CLDND1-219ENST00000508659 ATAD1Q8NBU5 361 aa18.18■□□□□ 0.5
CLDND1-219ENST00000508659 TMC2Q8TDI7 906 aa18.18■□□□□ 0.5
CLDND1-219ENST00000508659 C2orf15Q8WU43 125 aaKnown RBP18.18■□□□□ 0.5
CLDND1-219ENST00000508659 ZNF516Q92618 1163 aa18.18■□□□□ 0.5
CLDND1-219ENST00000508659 ZNF512Q96ME7 567 aaPredicted RBP18.18■□□□□ 0.5
CLDND1-219ENST00000508659 ACBD6Q9BR61 282 aa18.18■□□□□ 0.5
CLDND1-219ENST00000508659 CRISPLD1Q9H336 500 aa18.18■□□□□ 0.5
CLDND1-219ENST00000508659 ASAH2Q9NR71 780 aa18.18■□□□□ 0.5
CLDND1-219ENST00000508659 ABI2Q9NYB9 513 aaPredicted RBP18.18■□□□□ 0.5
CLDND1-219ENST00000508659 HSFX1Q9UBD0 423 aa18.18■□□□□ 0.5
CLDND1-219ENST00000508659 MAN1B1Q9UKM7 699 aa18.18■□□□□ 0.5
CLDND1-219ENST00000508659 CDH7Q9ULB5 785 aa18.18■□□□□ 0.5
CLDND1-219ENST00000508659 MRPS23Q9Y3D9 190 aaKnown RBP18.18■□□□□ 0.5
CLDND1-219ENST00000508659 CETN3O15182 167 aa18.17■□□□□ 0.5
CLDND1-219ENST00000508659 STAU1O95793 577 aaKnown RBP18.17■□□□□ 0.5
CLDND1-219ENST00000508659 CST3P01034 146 aaPredicted RBP18.17■□□□□ 0.5
CLDND1-219ENST00000508659 EPB41P11171 864 aaKnown RBP18.17■□□□□ 0.5
CLDND1-219ENST00000508659 PTPN2P17706 415 aa18.17■□□□□ 0.5
CLDND1-219ENST00000508659 ACAT1P24752 427 aaKnown RBP18.17■□□□□ 0.5
CLDND1-219ENST00000508659 ATICP31939 592 aa18.17■□□□□ 0.5
CLDND1-219ENST00000508659 PPP1R2P41236 205 aa18.17■□□□□ 0.5
CLDND1-219ENST00000508659 EPHB3P54753 998 aa18.17■□□□□ 0.5
CLDND1-219ENST00000508659 MYL6P60660 151 aa18.17■□□□□ 0.5
CLDND1-219ENST00000508659 ZXDAP98168 799 aa18.17■□□□□ 0.5
CLDND1-219ENST00000508659 NCOA4Q13772 614 aa18.17■□□□□ 0.5
CLDND1-219ENST00000508659 NFE2Q16621 373 aaPredicted RBP18.17■□□□□ 0.5
CLDND1-219ENST00000508659 WDR72Q3MJ13 1102 aa18.17■□□□□ 0.5
CLDND1-219ENST00000508659 MGAT5BQ3V5L5 792 aa18.17■□□□□ 0.5
CLDND1-219ENST00000508659 INTS6LQ5JSJ4 861 aaKnown RBP18.17■□□□□ 0.5
CLDND1-219ENST00000508659 TTC9BQ8N6N2 239 aa18.17■□□□□ 0.5
CLDND1-219ENST00000508659 SPPL2BQ8TCT7 592 aa18.17■□□□□ 0.5
CLDND1-219ENST00000508659 ING5Q8WYH8 240 aa18.17■□□□□ 0.5
CLDND1-219ENST00000508659 EDAQ92838 391 aa18.17■□□□□ 0.5
CLDND1-219ENST00000508659 MKNK1Q9BUB5 465 aa18.17■□□□□ 0.5
CLDND1-219ENST00000508659 SLC27A5Q9Y2P5 690 aa18.17■□□□□ 0.5
CLDND1-219ENST00000508659 ZFP37Q9Y6Q3 630 aaPredicted RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms