RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 ANKRD39Q53RE8 183 aa6.1□□□□□ -1.43
HMGB1P44-201ENST00000508597 XKR3Q5GH77 459 aa6.1□□□□□ -1.43
HMGB1P44-201ENST00000508597 ZNF484Q5JVG2 852 aa6.1□□□□□ -1.43
HMGB1P44-201ENST00000508597 HYIQ5T013 277 aa6.1□□□□□ -1.43
HMGB1P44-201ENST00000508597 GJC2Q5T442 439 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P44-201ENST00000508597 ADALQ6DHV7 355 aa6.1□□□□□ -1.43
HMGB1P44-201ENST00000508597 NCAPH2Q6IBW4 605 aa6.1□□□□□ -1.43
HMGB1P44-201ENST00000508597 SWSAP1Q6NVH7 229 aa6.1□□□□□ -1.43
HMGB1P44-201ENST00000508597 FAM173BQ6P4H8 233 aa6.1□□□□□ -1.43
HMGB1P44-201ENST00000508597 CRTC3Q6UUV7 619 aa6.1□□□□□ -1.43
HMGB1P44-201ENST00000508597 FAM43BQ6ZT52 329 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P44-201ENST00000508597 OTUD6AQ7L8S5 288 aa6.1□□□□□ -1.43
HMGB1P44-201ENST00000508597 NECAB2Q7Z6G3 386 aa6.1□□□□□ -1.43
HMGB1P44-201ENST00000508597 ATG4DQ86TL0 474 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P44-201ENST00000508597 SESTD1Q86VW0 696 aa6.1□□□□□ -1.43
HMGB1P44-201ENST00000508597 LEO1Q8WVC0 666 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P44-201ENST00000508597 GLG1Q92896 1179 aa6.1□□□□□ -1.43
HMGB1P44-201ENST00000508597 CALML4Q96GE6 196 aa6.1□□□□□ -1.43
HMGB1P44-201ENST00000508597 GBP4Q96PP9 640 aa6.1□□□□□ -1.43
HMGB1P44-201ENST00000508597 EIF2AK1Q9BQI3 630 aaKnown RBP6.1□□□□□ -1.43
HMGB1P44-201ENST00000508597 JPH2Q9BR39 696 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P44-201ENST00000508597 C16orf70Q9BSU1 422 aa6.1□□□□□ -1.43
HMGB1P44-201ENST00000508597 LGR4Q9BXB1 951 aa6.1□□□□□ -1.43
HMGB1P44-201ENST00000508597 CCSER1Q9C0I3 900 aa6.1□□□□□ -1.43
HMGB1P44-201ENST00000508597 FBXO2Q9UK22 296 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P44-201ENST00000508597 PCDHB12Q9Y5F1 795 aa6.1□□□□□ -1.43
HMGB1P44-201ENST00000508597 A0A0U1RQG5 324 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P44-201ENST00000508597 A0A1W2PQ27 194 aa6.09□□□□□ -1.43
HMGB1P44-201ENST00000508597 A0A1W2PQ64 194 aa6.09□□□□□ -1.43
HMGB1P44-201ENST00000508597 A0A1W2PQD8 194 aa6.09□□□□□ -1.43
HMGB1P44-201ENST00000508597 GOLGA6L4A6NEF3 574 aa6.09□□□□□ -1.43
HMGB1P44-201ENST00000508597 NOTOA8MTQ0 251 aa6.09□□□□□ -1.43
HMGB1P44-201ENST00000508597 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P44-201ENST00000508597 GOLGA6L22H0YM25 854 aa6.09□□□□□ -1.43
HMGB1P44-201ENST00000508597 DDX39AO00148 427 aaKnown RBP6.09□□□□□ -1.43
HMGB1P44-201ENST00000508597 MAGEB2O15479 319 aa6.09□□□□□ -1.43
HMGB1P44-201ENST00000508597 CHMP2AO43633 222 aa6.09□□□□□ -1.43
HMGB1P44-201ENST00000508597 SYPP08247 313 aa6.09□□□□□ -1.43
HMGB1P44-201ENST00000508597 MYL3P08590 195 aa6.09□□□□□ -1.43
HMGB1P44-201ENST00000508597 CMA1P23946 247 aa6.09□□□□□ -1.43
HMGB1P44-201ENST00000508597 MARCKSP29966 332 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P44-201ENST00000508597 GDNFP39905 211 aa6.09□□□□□ -1.43
HMGB1P44-201ENST00000508597 ME1P48163 572 aa6.09□□□□□ -1.43
HMGB1P44-201ENST00000508597 GALK1P51570 392 aa6.09□□□□□ -1.43
HMGB1P44-201ENST00000508597 BEX3Q00994 111 aa6.09□□□□□ -1.43
HMGB1P44-201ENST00000508597 CEBPZQ03701 1054 aaKnown RBP6.09□□□□□ -1.43
HMGB1P44-201ENST00000508597 IFRD2Q12894 506 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P44-201ENST00000508597 KIAA0753Q2KHM9 967 aa6.09□□□□□ -1.43
HMGB1P44-201ENST00000508597 TMEM63BQ5T3F8 832 aa6.09□□□□□ -1.43
HMGB1P44-201ENST00000508597 UTP14CQ5TAP6 766 aaKnown RBP6.09□□□□□ -1.43
HMGB1P44-201ENST00000508597 CXCL17Q6UXB2 119 aa6.09□□□□□ -1.43
HMGB1P44-201ENST00000508597 CCDC73Q6ZRK6 1079 aa6.09□□□□□ -1.43
HMGB1P44-201ENST00000508597 JAZF1Q86VZ6 243 aa6.09□□□□□ -1.43
HMGB1P44-201ENST00000508597 CCDC60Q8IWA6 550 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P44-201ENST00000508597 ZNF655Q8N720 491 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P44-201ENST00000508597 ZNF513Q8N8E2 541 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P44-201ENST00000508597 ENOX1Q8TC92 643 aaKnown RBP6.09□□□□□ -1.43
HMGB1P44-201ENST00000508597 ATP8B4Q8TF62 1192 aa6.09□□□□□ -1.43
HMGB1P44-201ENST00000508597 KAT2BQ92831 832 aa6.09□□□□□ -1.43
HMGB1P44-201ENST00000508597 CCDC34Q96HJ3 373 aa6.09□□□□□ -1.43
HMGB1P44-201ENST00000508597 CDK5RAP3Q96JB5 506 aa6.09□□□□□ -1.43
HMGB1P44-201ENST00000508597 TOX2Q96NM4 488 aa6.09□□□□□ -1.43
HMGB1P44-201ENST00000508597 PCYT2Q99447 389 aa6.09□□□□□ -1.43
HMGB1P44-201ENST00000508597 LXNQ9BS40 222 aa6.09□□□□□ -1.43
HMGB1P44-201ENST00000508597 KRTAP9-9Q9BYP9 154 aa6.09□□□□□ -1.43
HMGB1P44-201ENST00000508597 KRTAP9-4Q9BYQ2 154 aa6.09□□□□□ -1.43
HMGB1P44-201ENST00000508597 CUEDC2Q9H467 287 aa6.09□□□□□ -1.43
HMGB1P44-201ENST00000508597 C11orf49Q9H6J7 331 aa6.09□□□□□ -1.43
HMGB1P44-201ENST00000508597 BCAS3Q9H6U6 928 aa6.09□□□□□ -1.43
HMGB1P44-201ENST00000508597 KCNK12Q9HB15 430 aa6.09□□□□□ -1.43
HMGB1P44-201ENST00000508597 STARD7Q9NQZ5 370 aa6.09□□□□□ -1.43
HMGB1P44-201ENST00000508597 ANKEF1Q9NU02 776 aa6.09□□□□□ -1.43
HMGB1P44-201ENST00000508597 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.09□□□□□ -1.43
HMGB1P44-201ENST00000508597 KCND2Q9NZV8 630 aa6.09□□□□□ -1.43
HMGB1P44-201ENST00000508597 GABBR1Q9UBS5 961 aa6.09□□□□□ -1.43
HMGB1P44-201ENST00000508597 USP25Q9UHP3 1055 aa6.09□□□□□ -1.43
HMGB1P44-201ENST00000508597 KCNG1Q9UIX4 513 aa6.09□□□□□ -1.43
HMGB1P44-201ENST00000508597 TMEM59LQ9UK28 342 aa6.09□□□□□ -1.43
HMGB1P44-201ENST00000508597 DBR1Q9UK59 544 aaKnown RBP6.09□□□□□ -1.43
HMGB1P44-201ENST00000508597 TCFL5Q9UL49 500 aa6.09□□□□□ -1.43
HMGB1P44-201ENST00000508597 PCDHA7Q9UN72 937 aa6.09□□□□□ -1.43
HMGB1P44-201ENST00000508597 DNM3Q9UQ16 869 aa6.09□□□□□ -1.43
HMGB1P44-201ENST00000508597 TRIP12Q14669 1992 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P44-201ENST00000508597 BRCA2P51587 3418 aa6.08□□□□□ -1.44
HMGB1P44-201ENST00000508597 EVPLQ92817 2033 aa6.08□□□□□ -1.44
HMGB1P44-201ENST00000508597 FAM237AA0A1B0GTK4 181 aa6.08□□□□□ -1.44
HMGB1P44-201ENST00000508597 A0A1W2PQ45 241 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P44-201ENST00000508597 A0A1W2PQY0 241 aa6.08□□□□□ -1.44
HMGB1P44-201ENST00000508597 MYADML2A6NDP7 307 aa6.08□□□□□ -1.44
HMGB1P44-201ENST00000508597 ZNF503-AS2A6NEH8 195 aa6.08□□□□□ -1.44
HMGB1P44-201ENST00000508597 CCDC85CA6NKD9 419 aa6.08□□□□□ -1.44
HMGB1P44-201ENST00000508597 H0Y8X5 98 aa6.08□□□□□ -1.44
HMGB1P44-201ENST00000508597 ARVCFO00192 962 aa6.08□□□□□ -1.44
HMGB1P44-201ENST00000508597 SUSD5O60279 629 aa6.08□□□□□ -1.44
HMGB1P44-201ENST00000508597 EPHX1P07099 455 aa6.08□□□□□ -1.44
HMGB1P44-201ENST00000508597 NAT2P11245 290 aa6.08□□□□□ -1.44
HMGB1P44-201ENST00000508597 PTMSP20962 102 aa6.08□□□□□ -1.44
HMGB1P44-201ENST00000508597 HOXC8P31273 242 aa6.08□□□□□ -1.44
HMGB1P44-201ENST00000508597 CCT6AP40227 531 aaKnown RBP6.08□□□□□ -1.44
HMGB1P44-201ENST00000508597 CDK7P50613 346 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 194 ms