RNA–Protein interactions for RNA: ENST00000507320.5

TRIM6-209, Transcript of tripartite motif containing 6, humanhuman

TSL 2 BASIC

Gene TRIM6, Length 1,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-209ENST00000507320 ERVFC1P60507 584 aa11.41□□□□□ -0.58
TRIM6-209ENST00000507320 ELAVL2Q12926 359 aaKnown RBP11.41□□□□□ -0.58
TRIM6-209ENST00000507320 ARHGAP44Q17R89 818 aa11.41□□□□□ -0.58
TRIM6-209ENST00000507320 USP41Q3LFD5 358 aa11.41□□□□□ -0.58
TRIM6-209ENST00000507320 VARS2Q5ST30 1063 aaKnown RBP11.41□□□□□ -0.58
TRIM6-209ENST00000507320 PRSS55Q6UWB4 352 aaPredicted RBP11.41□□□□□ -0.58
TRIM6-209ENST00000507320 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.41□□□□□ -0.58
TRIM6-209ENST00000507320 DPH6Q7L8W6 267 aa11.41□□□□□ -0.58
TRIM6-209ENST00000507320 VSTM4Q8IW00 320 aa11.41□□□□□ -0.58
TRIM6-209ENST00000507320 UBR7Q8N806 425 aa11.41□□□□□ -0.58
TRIM6-209ENST00000507320 NEK11Q8NG66 645 aa11.41□□□□□ -0.58
TRIM6-209ENST00000507320 GDPD5Q8WTR4 605 aa11.41□□□□□ -0.58
TRIM6-209ENST00000507320 POF1BQ8WVV4 589 aa11.41□□□□□ -0.58
TRIM6-209ENST00000507320 SAMD11Q96NU1 681 aa11.41□□□□□ -0.58
TRIM6-209ENST00000507320 TWNKQ96RR1 684 aa11.41□□□□□ -0.58
TRIM6-209ENST00000507320 RTP3Q9BQQ7 232 aa11.41□□□□□ -0.58
TRIM6-209ENST00000507320 TTPALQ9BTX7 342 aa11.41□□□□□ -0.58
TRIM6-209ENST00000507320 C11orf84Q9BUA3 381 aaPredicted RBP11.41□□□□□ -0.58
TRIM6-209ENST00000507320 GPR88Q9GZN0 384 aa11.41□□□□□ -0.58
TRIM6-209ENST00000507320 TTYH1Q9H313 450 aaPredicted RBP11.41□□□□□ -0.58
TRIM6-209ENST00000507320 ZNF576Q9H609 170 aa11.41□□□□□ -0.58
TRIM6-209ENST00000507320 NLRC4Q9NPP4 1024 aa11.41□□□□□ -0.58
TRIM6-209ENST00000507320 CISHQ9NSE2 258 aa11.41□□□□□ -0.58
TRIM6-209ENST00000507320 COL4A4P53420 1690 aaPredicted RBP11.41□□□□□ -0.58
TRIM6-209ENST00000507320 GABRDO14764 452 aa11.4□□□□□ -0.58
TRIM6-209ENST00000507320 TACC1O75410 805 aa11.4□□□□□ -0.58
TRIM6-209ENST00000507320 TRIM21P19474 475 aaKnown RBP11.4□□□□□ -0.58
TRIM6-209ENST00000507320 TYMPP19971 482 aa11.4□□□□□ -0.58
TRIM6-209ENST00000507320 PAX3P23760 479 aa11.4□□□□□ -0.58
TRIM6-209ENST00000507320 TBXAS1P24557 533 aaPredicted RBP11.4□□□□□ -0.58
TRIM6-209ENST00000507320 IRS1P35568 1242 aa11.4□□□□□ -0.58
TRIM6-209ENST00000507320 CDR1P51861 262 aa11.4□□□□□ -0.58
TRIM6-209ENST00000507320 YWHAHQ04917 246 aaPredicted RBP11.4□□□□□ -0.58
TRIM6-209ENST00000507320 ORC1Q13415 861 aa11.4□□□□□ -0.58
TRIM6-209ENST00000507320 GPM6BQ13491 265 aa11.4□□□□□ -0.58
TRIM6-209ENST00000507320 RAPGEF1Q13905 1077 aa11.4□□□□□ -0.58
TRIM6-209ENST00000507320 MRPL58Q14197 206 aaKnown RBP11.4□□□□□ -0.58
TRIM6-209ENST00000507320 CCDC142Q17RM4 750 aa11.4□□□□□ -0.58
TRIM6-209ENST00000507320 KIAA0319Q5VV43 1072 aa11.4□□□□□ -0.58
TRIM6-209ENST00000507320 OVOS1Q6IE37 1185 aa11.4□□□□□ -0.58
TRIM6-209ENST00000507320 RSPO2Q6UXX9 243 aaPredicted RBP11.4□□□□□ -0.58
TRIM6-209ENST00000507320 GPIHBP1Q8IV16 184 aa11.4□□□□□ -0.58
TRIM6-209ENST00000507320 LNX1Q8TBB1 728 aaPredicted RBP11.4□□□□□ -0.58
TRIM6-209ENST00000507320 WHAMMQ8TF30 809 aa11.4□□□□□ -0.58
TRIM6-209ENST00000507320 RIN2Q8WYP3 895 aaPredicted RBP11.4□□□□□ -0.58
TRIM6-209ENST00000507320 MRFAP1L1Q96HT8 127 aa11.4□□□□□ -0.58
TRIM6-209ENST00000507320 FAXDC2Q96IV6 333 aa11.4□□□□□ -0.58
TRIM6-209ENST00000507320 HERC2P3Q9BVR0 1158 aa11.4□□□□□ -0.58
TRIM6-209ENST00000507320 ZBP1Q9H171 429 aa11.4□□□□□ -0.58
TRIM6-209ENST00000507320 LZTS1Q9Y250 596 aa11.4□□□□□ -0.58
TRIM6-209ENST00000507320 REV3LO60673 3130 aa11.4□□□□□ -0.58
TRIM6-209ENST00000507320 LPXNO60711 386 aa11.39□□□□□ -0.59
TRIM6-209ENST00000507320 CILPO75339 1184 aa11.39□□□□□ -0.59
TRIM6-209ENST00000507320 OAZ2O95190 189 aa11.39□□□□□ -0.59
TRIM6-209ENST00000507320 GYPCP04921 128 aa11.39□□□□□ -0.59
TRIM6-209ENST00000507320 PDGFRBP09619 1106 aa11.39□□□□□ -0.59
TRIM6-209ENST00000507320 RPL17P18621 184 aaKnown RBP11.39□□□□□ -0.59
TRIM6-209ENST00000507320 WARSP23381 471 aaKnown RBP11.39□□□□□ -0.59
TRIM6-209ENST00000507320 ACAT1P24752 427 aaKnown RBP11.39□□□□□ -0.59
TRIM6-209ENST00000507320 GLUD2P49448 558 aa11.39□□□□□ -0.59
TRIM6-209ENST00000507320 NDST1P52848 882 aa11.39□□□□□ -0.59
TRIM6-209ENST00000507320 DSG1Q02413 1049 aa11.39□□□□□ -0.59
TRIM6-209ENST00000507320 INCA1Q0VD86 236 aa11.39□□□□□ -0.59
TRIM6-209ENST00000507320 DRAP1Q14919 205 aaPredicted RBP11.39□□□□□ -0.59
TRIM6-209ENST00000507320 ZNF394Q53GI3 561 aa11.39□□□□□ -0.59
TRIM6-209ENST00000507320 SPECC1LQ69YQ0 1117 aa11.39□□□□□ -0.59
TRIM6-209ENST00000507320 KIAA1841Q6NSI8 718 aa11.39□□□□□ -0.59
TRIM6-209ENST00000507320 TMEM86AQ8N2M4 240 aa11.39□□□□□ -0.59
TRIM6-209ENST00000507320 OR6B3Q8NGW1 331 aa11.39□□□□□ -0.59
TRIM6-209ENST00000507320 OR10T2Q8NGX3 314 aa11.39□□□□□ -0.59
TRIM6-209ENST00000507320 TMEM209Q96SK2 561 aa11.39□□□□□ -0.59
TRIM6-209ENST00000507320 TCF25Q9BQ70 676 aa11.39□□□□□ -0.59
TRIM6-209ENST00000507320 LPIN3Q9BQK8 851 aa11.39□□□□□ -0.59
TRIM6-209ENST00000507320 DPEP3Q9H4B8 488 aa11.39□□□□□ -0.59
TRIM6-209ENST00000507320 CYP3A43Q9HB55 503 aa11.39□□□□□ -0.59
TRIM6-209ENST00000507320 DDX43Q9NXZ2 648 aaKnown RBP11.39□□□□□ -0.59
TRIM6-209ENST00000507320 PUF60Q9UHX1 559 aaKnown RBP11.39□□□□□ -0.59
TRIM6-209ENST00000507320 FBXL5Q9UKA1 691 aa11.39□□□□□ -0.59
TRIM6-209ENST00000507320 STXBP5LQ9Y2K9 1186 aa11.39□□□□□ -0.59
TRIM6-209ENST00000507320 ITIH6Q6UXX5 1313 aa11.39□□□□□ -0.59
TRIM6-209ENST00000507320 PRRC2BQ5JSZ5 2229 aaKnown RBP11.39□□□□□ -0.59
TRIM6-209ENST00000507320 HIDE1A8MVS5 230 aa11.39□□□□□ -0.59
TRIM6-209ENST00000507320 A8MXQ7 604 aa11.39□□□□□ -0.59
TRIM6-209ENST00000507320 FOXN3O00409 490 aaPredicted RBP11.39□□□□□ -0.59
TRIM6-209ENST00000507320 ADAM12O43184 909 aa11.39□□□□□ -0.59
TRIM6-209ENST00000507320 TBC1D4O60343 1298 aa11.39□□□□□ -0.59
TRIM6-209ENST00000507320 LILRB3O75022 631 aa11.39□□□□□ -0.59
TRIM6-209ENST00000507320 ATP2C2O75185 946 aa11.39□□□□□ -0.59
TRIM6-209ENST00000507320 CALCAP01258 141 aa11.39□□□□□ -0.59
TRIM6-209ENST00000507320 CTSAP10619 480 aa11.39□□□□□ -0.59
TRIM6-209ENST00000507320 GNL1P36915 607 aaPredicted RBP11.39□□□□□ -0.59
TRIM6-209ENST00000507320 MRE11P49959 708 aa11.39□□□□□ -0.59
TRIM6-209ENST00000507320 MFAP3P55082 362 aa11.39□□□□□ -0.59
TRIM6-209ENST00000507320 JAM2P57087 298 aa11.39□□□□□ -0.59
TRIM6-209ENST00000507320 UBE3AQ05086 875 aa11.39□□□□□ -0.59
TRIM6-209ENST00000507320 PTPN14Q15678 1187 aa11.39□□□□□ -0.59
TRIM6-209ENST00000507320 TMEM270Q6UE05 265 aa11.39□□□□□ -0.59
TRIM6-209ENST00000507320 TMC7Q7Z402 723 aa11.39□□□□□ -0.59
TRIM6-209ENST00000507320 TMC6Q7Z403 805 aa11.39□□□□□ -0.59
TRIM6-209ENST00000507320 IPO4Q8TEX9 1081 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms