RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 SLC30A10Q6XR72 485 aa18.72■□□□□ 0.59
NUP54-205ENST00000507257 PCGF5Q86SE9 256 aa18.72■□□□□ 0.59
NUP54-205ENST00000507257 SMC1BQ8NDV3 1235 aa18.72■□□□□ 0.59
NUP54-205ENST00000507257 ZSWIM2Q8NEG5 633 aa18.72■□□□□ 0.59
NUP54-205ENST00000507257 STMN2Q93045 179 aa18.72■□□□□ 0.59
NUP54-205ENST00000507257 NKD2Q969F2 451 aaPredicted RBP18.72■□□□□ 0.59
NUP54-205ENST00000507257 AZIN2Q96A70 460 aa18.72■□□□□ 0.59
NUP54-205ENST00000507257 DTNBP1Q96EV8 351 aa18.72■□□□□ 0.59
NUP54-205ENST00000507257 FGD4Q96M96 766 aa18.72■□□□□ 0.59
NUP54-205ENST00000507257 MRIQ9BWK5 157 aa18.72■□□□□ 0.59
NUP54-205ENST00000507257 MANSC1Q9H8J5 431 aa18.72■□□□□ 0.59
NUP54-205ENST00000507257 PCDH9Q9HC56 1237 aa18.72■□□□□ 0.59
NUP54-205ENST00000507257 SCINQ9Y6U3 715 aa18.72■□□□□ 0.59
NUP54-205ENST00000507257 ZHX2Q9Y6X8 837 aa18.72■□□□□ 0.59
NUP54-205ENST00000507257 PDLIM1O00151 329 aa18.71■□□□□ 0.59
NUP54-205ENST00000507257 IPO5O00410 1097 aaKnown RBP18.71■□□□□ 0.59
NUP54-205ENST00000507257 DHRS4L1P0CG22 281 aa18.71■□□□□ 0.59
NUP54-205ENST00000507257 RARBP10826 455 aa18.71■□□□□ 0.59
NUP54-205ENST00000507257 RARRES1P49788 294 aa18.71■□□□□ 0.59
NUP54-205ENST00000507257 ARFIP2P53365 341 aa18.71■□□□□ 0.59
NUP54-205ENST00000507257 FASTKD3Q14CZ7 662 aaKnown RBP18.71■□□□□ 0.59
NUP54-205ENST00000507257 DLGAP5Q15398 846 aa18.71■□□□□ 0.59
NUP54-205ENST00000507257 PLEKHA7Q6IQ23 1121 aa18.71■□□□□ 0.59
NUP54-205ENST00000507257 AMIGO3Q86WK7 504 aa18.71■□□□□ 0.59
NUP54-205ENST00000507257 CBWD2Q8IUF1 395 aa18.71■□□□□ 0.59
NUP54-205ENST00000507257 BANPQ8N9N5 519 aa18.71■□□□□ 0.59
NUP54-205ENST00000507257 RFWD2Q8NHY2 731 aa18.71■□□□□ 0.59
NUP54-205ENST00000507257 TAS1R2Q8TE23 839 aa18.71■□□□□ 0.59
NUP54-205ENST00000507257 NCSTNQ92542 709 aa18.71■□□□□ 0.59
NUP54-205ENST00000507257 PTPRN2Q92932 1015 aa18.71■□□□□ 0.59
NUP54-205ENST00000507257 MCUR1Q96AQ8 359 aa18.71■□□□□ 0.59
NUP54-205ENST00000507257 IDI2Q9BXS1 227 aa18.71■□□□□ 0.59
NUP54-205ENST00000507257 HEY2Q9UBP5 337 aa18.71■□□□□ 0.59
NUP54-205ENST00000507257 RABGEF1Q9UJ41 708 aa18.71■□□□□ 0.59
NUP54-205ENST00000507257 ANGPTL2Q9UKU9 493 aa18.71■□□□□ 0.59
NUP54-205ENST00000507257 SMCHD1A6NHR9 2005 aa18.71■□□□□ 0.59
NUP54-205ENST00000507257 ARP10275 920 aa18.7■□□□□ 0.58
NUP54-205ENST00000507257 ADRA1DP25100 572 aa18.7■□□□□ 0.58
NUP54-205ENST00000507257 ARSEP51690 589 aa18.7■□□□□ 0.58
NUP54-205ENST00000507257 CUL3Q13618 768 aa18.7■□□□□ 0.58
NUP54-205ENST00000507257 SEPT7Q16181 437 aaKnown RBP18.7■□□□□ 0.58
NUP54-205ENST00000507257 LRRC38Q5VT99 294 aa18.7■□□□□ 0.58
NUP54-205ENST00000507257 FOXB2Q5VYV0 432 aa18.7■□□□□ 0.58
NUP54-205ENST00000507257 VPS52Q8N1B4 723 aa18.7■□□□□ 0.58
NUP54-205ENST00000507257 DRAXINQ8NBI3 349 aaPredicted RBP18.7■□□□□ 0.58
NUP54-205ENST00000507257 ZDHHC15Q96MV8 337 aa18.7■□□□□ 0.58
NUP54-205ENST00000507257 GORASP1Q9BQQ3 440 aa18.7■□□□□ 0.58
NUP54-205ENST00000507257 FHDC1Q9C0D6 1143 aaPredicted RBP18.7■□□□□ 0.58
NUP54-205ENST00000507257 TMX4Q9H1E5 349 aaPredicted RBP18.7■□□□□ 0.58
NUP54-205ENST00000507257 ACSS3Q9H6R3 686 aa18.7■□□□□ 0.58
NUP54-205ENST00000507257 TAS2R1Q9NYW7 299 aa18.7■□□□□ 0.58
NUP54-205ENST00000507257 DNPEPQ9ULA0 475 aa18.7■□□□□ 0.58
NUP54-205ENST00000507257 SLC4A7Q9Y6M7 1214 aa18.7■□□□□ 0.58
NUP54-205ENST00000507257 RNF8O76064 485 aa18.7■□□□□ 0.58
NUP54-205ENST00000507257 ITGAVP06756 1048 aa18.7■□□□□ 0.58
NUP54-205ENST00000507257 KRT5P13647 590 aa18.7■□□□□ 0.58
NUP54-205ENST00000507257 BRD2P25440 801 aaKnown RBP18.7■□□□□ 0.58
NUP54-205ENST00000507257 OASLQ15646 514 aaKnown RBP18.7■□□□□ 0.58
NUP54-205ENST00000507257 CCDC62Q6P9F0 684 aa18.7■□□□□ 0.58
NUP54-205ENST00000507257 ZC3H18Q86VM9 953 aaKnown RBP18.7■□□□□ 0.58
NUP54-205ENST00000507257 PHF13Q86YI8 300 aaPredicted RBP18.7■□□□□ 0.58
NUP54-205ENST00000507257 MAP4K3Q8IVH8 894 aa18.7■□□□□ 0.58
NUP54-205ENST00000507257 ZFPM1Q8IX07 1006 aa18.7■□□□□ 0.58
NUP54-205ENST00000507257 ZBED8Q8IZ13 594 aa18.7■□□□□ 0.58
NUP54-205ENST00000507257 ATP11CQ8NB49 1132 aa18.7■□□□□ 0.58
NUP54-205ENST00000507257 TSSK1BQ9BXA7 367 aa18.7■□□□□ 0.58
NUP54-205ENST00000507257 DEFB129Q9H1M3 183 aa18.7■□□□□ 0.58
NUP54-205ENST00000507257 KCNK13Q9HB14 408 aa18.7■□□□□ 0.58
NUP54-205ENST00000507257 DMAP1Q9NPF5 467 aaPredicted RBP18.7■□□□□ 0.58
NUP54-205ENST00000507257 FARP1Q9Y4F1 1045 aaPredicted RBP18.7■□□□□ 0.58
NUP54-205ENST00000507257 LY75O60449 1722 aa18.7■□□□□ 0.58
NUP54-205ENST00000507257 CFBP00751 764 aa18.69■□□□□ 0.58
NUP54-205ENST00000507257 VCPP55072 806 aaKnown RBP18.69■□□□□ 0.58
NUP54-205ENST00000507257 SESN3P58005 492 aa18.69■□□□□ 0.58
NUP54-205ENST00000507257 GPX6P59796 221 aa18.69■□□□□ 0.58
NUP54-205ENST00000507257 GPS1Q13098 491 aa18.69■□□□□ 0.58
NUP54-205ENST00000507257 ABCB5Q2M3G0 1257 aa18.69■□□□□ 0.58
NUP54-205ENST00000507257 SHROOM1Q2M3G4 852 aaPredicted RBP18.69■□□□□ 0.58
NUP54-205ENST00000507257 TRAPPC3LQ5T215 181 aa18.69■□□□□ 0.58
NUP54-205ENST00000507257 SV2AQ7L0J3 742 aa18.69■□□□□ 0.58
NUP54-205ENST00000507257 NIPA1Q7RTP0 329 aa18.69■□□□□ 0.58
NUP54-205ENST00000507257 SP8Q8IXZ3 490 aa18.69■□□□□ 0.58
NUP54-205ENST00000507257 MXRA8Q9BRK3 442 aa18.69■□□□□ 0.58
NUP54-205ENST00000507257 RANBP17Q9H2T7 1088 aaKnown RBP18.69■□□□□ 0.58
NUP54-205ENST00000507257 KRT82Q9NSB4 513 aa18.69■□□□□ 0.58
NUP54-205ENST00000507257 IL1RAPL1Q9NZN1 696 aa18.69■□□□□ 0.58
NUP54-205ENST00000507257 ZNF148Q9UQR1 794 aa18.69■□□□□ 0.58
NUP54-205ENST00000507257 CLUHO75153 1309 aa18.69■□□□□ 0.58
NUP54-205ENST00000507257 CFAP69A5D8W1 941 aa18.68■□□□□ 0.58
NUP54-205ENST00000507257 E7ESA3 106 aa18.68■□□□□ 0.58
NUP54-205ENST00000507257 SMAPO00193 183 aa18.68■□□□□ 0.58
NUP54-205ENST00000507257 KLF11O14901 512 aa18.68■□□□□ 0.58
NUP54-205ENST00000507257 DLDP09622 509 aaKnown RBP18.68■□□□□ 0.58
NUP54-205ENST00000507257 PSMC4P43686 418 aa18.68■□□□□ 0.58
NUP54-205ENST00000507257 SH3BGRP55822 239 aaPredicted RBP18.68■□□□□ 0.58
NUP54-205ENST00000507257 CDK18Q07002 472 aa18.68■□□□□ 0.58
NUP54-205ENST00000507257 PDIA2Q13087 525 aaKnown RBP18.68■□□□□ 0.58
NUP54-205ENST00000507257 MAMLD1Q13495 774 aa18.68■□□□□ 0.58
NUP54-205ENST00000507257 PRKD1Q15139 912 aaPredicted RBP18.68■□□□□ 0.58
NUP54-205ENST00000507257 MIER3Q7Z3K6 550 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms