RNA–Protein interactions for RNA: ENST00000507142.5

NEK1-203, Transcript of NIMA related kinase 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NEK1, Length 5,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-203ENST00000507142 E2F5Q15329 346 aa9.96□□□□□ -0.81
NEK1-203ENST00000507142 PABPC1LQ4VXU2 614 aaKnown RBP9.96□□□□□ -0.81
NEK1-203ENST00000507142 EPC2Q52LR7 807 aa9.96□□□□□ -0.81
NEK1-203ENST00000507142 HERC6Q8IVU3 1022 aa9.96□□□□□ -0.81
NEK1-203ENST00000507142 ZNF564Q8TBZ8 553 aaPredicted RBP9.96□□□□□ -0.81
NEK1-203ENST00000507142 RMDN1Q96DB5 314 aa9.96□□□□□ -0.81
NEK1-203ENST00000507142 ZBED3Q96IU2 234 aaPredicted RBP9.96□□□□□ -0.81
NEK1-203ENST00000507142 RPRD1AQ96P16 312 aaPredicted RBP9.96□□□□□ -0.81
NEK1-203ENST00000507142 NXF3Q9H4D5 531 aaKnown RBP9.96□□□□□ -0.81
NEK1-203ENST00000507142 INTS13Q9NVM9 706 aa9.96□□□□□ -0.81
NEK1-203ENST00000507142 PLA2G4CQ9UP65 541 aa9.96□□□□□ -0.81
NEK1-203ENST00000507142 P4HA2O15460 535 aa9.96□□□□□ -0.81
NEK1-203ENST00000507142 VDRP11473 427 aa9.96□□□□□ -0.81
NEK1-203ENST00000507142 AP1B1Q10567 949 aa9.96□□□□□ -0.81
NEK1-203ENST00000507142 SLC39A5Q6ZMH5 540 aa9.96□□□□□ -0.81
NEK1-203ENST00000507142 RAB3IL1Q8TBN0 382 aa9.96□□□□□ -0.81
NEK1-203ENST00000507142 FBXO44Q9H4M3 255 aa9.96□□□□□ -0.81
NEK1-203ENST00000507142 KCNK9Q9NPC2 374 aa9.96□□□□□ -0.81
NEK1-203ENST00000507142 PCDHA13Q9Y5I0 950 aa9.96□□□□□ -0.81
NEK1-203ENST00000507142 UQCRHLA0A096LP55 91 aa9.96□□□□□ -0.82
NEK1-203ENST00000507142 MAP3K7O43318 606 aa9.96□□□□□ -0.82
NEK1-203ENST00000507142 OR1D2P34982 312 aa9.96□□□□□ -0.82
NEK1-203ENST00000507142 CDH6P55285 790 aa9.96□□□□□ -0.82
NEK1-203ENST00000507142 RIPOR3Q96MK2 946 aa9.96□□□□□ -0.82
NEK1-203ENST00000507142 XPO6Q96QU8 1125 aaKnown RBP9.96□□□□□ -0.82
NEK1-203ENST00000507142 STK33Q9BYT3 514 aa9.96□□□□□ -0.82
NEK1-203ENST00000507142 CDT1Q9H211 546 aa9.96□□□□□ -0.82
NEK1-203ENST00000507142 DDIT4Q9NX09 232 aa9.96□□□□□ -0.82
NEK1-203ENST00000507142 FTCDO95954 541 aa9.96□□□□□ -0.82
NEK1-203ENST00000507142 EN2P19622 333 aaPredicted RBP9.96□□□□□ -0.82
NEK1-203ENST00000507142 BCAT1P54687 386 aa9.96□□□□□ -0.82
NEK1-203ENST00000507142 TAP1Q03518 808 aa9.96□□□□□ -0.82
NEK1-203ENST00000507142 PREPLQ4J6C6 727 aaPredicted RBP9.96□□□□□ -0.82
NEK1-203ENST00000507142 BRSK2Q8IWQ3 736 aa9.96□□□□□ -0.82
NEK1-203ENST00000507142 TMC2Q8TDI7 906 aa9.96□□□□□ -0.82
NEK1-203ENST00000507142 PABPC5Q96DU9 382 aaKnown RBP9.96□□□□□ -0.82
NEK1-203ENST00000507142 OLFML3Q9NRN5 406 aa9.96□□□□□ -0.82
NEK1-203ENST00000507142 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.96□□□□□ -0.82
NEK1-203ENST00000507142 BAZ2BQ9UIF8 2168 aaKnown RBP9.96□□□□□ -0.82
NEK1-203ENST00000507142 KRT7P08729 469 aa9.96□□□□□ -0.82
NEK1-203ENST00000507142 CSF2RAP15509 400 aa9.96□□□□□ -0.82
NEK1-203ENST00000507142 SERPINB6P35237 376 aa9.96□□□□□ -0.82
NEK1-203ENST00000507142 TMEM119Q4V9L6 283 aa9.96□□□□□ -0.82
NEK1-203ENST00000507142 TMEM63BQ5T3F8 832 aa9.96□□□□□ -0.82
NEK1-203ENST00000507142 WSCD1Q658N2 575 aa9.96□□□□□ -0.82
NEK1-203ENST00000507142 SPOPLQ6IQ16 392 aa9.96□□□□□ -0.82
NEK1-203ENST00000507142 CHRDL2Q6WN34 429 aa9.96□□□□□ -0.82
NEK1-203ENST00000507142 ETNPPLQ8TBG4 499 aa9.96□□□□□ -0.82
NEK1-203ENST00000507142 MAGOHBQ96A72 148 aaKnown RBP9.96□□□□□ -0.82
NEK1-203ENST00000507142 RNF25Q96BH1 459 aaPredicted RBP9.96□□□□□ -0.82
NEK1-203ENST00000507142 F5H423 210 aaPredicted RBP9.95□□□□□ -0.82
NEK1-203ENST00000507142 ZNF197O14709 1029 aa9.95□□□□□ -0.82
NEK1-203ENST00000507142 RTN3O95197 1032 aaPredicted RBP9.95□□□□□ -0.82
NEK1-203ENST00000507142 ARF4P18085 180 aaPredicted RBP9.95□□□□□ -0.82
NEK1-203ENST00000507142 SLC9A1P19634 815 aa9.95□□□□□ -0.82
NEK1-203ENST00000507142 BDNFP23560 247 aa9.95□□□□□ -0.82
NEK1-203ENST00000507142 TUSC3Q13454 348 aa9.95□□□□□ -0.82
NEK1-203ENST00000507142 TMEM86AQ8N2M4 240 aa9.95□□□□□ -0.82
NEK1-203ENST00000507142 RPGRIP1Q96KN7 1286 aa9.95□□□□□ -0.82
NEK1-203ENST00000507142 PPP1R13BQ96KQ4 1090 aa9.95□□□□□ -0.82
NEK1-203ENST00000507142 CDK5RAP1Q96SZ6 601 aaKnown RBP9.95□□□□□ -0.82
NEK1-203ENST00000507142 ACO2Q99798 780 aaKnown RBP9.95□□□□□ -0.82
NEK1-203ENST00000507142 RAB17Q9H0T7 212 aa9.95□□□□□ -0.82
NEK1-203ENST00000507142 CYP3A43Q9HB55 503 aa9.95□□□□□ -0.82
NEK1-203ENST00000507142 KIAA1257Q9ULG3 409 aa9.95□□□□□ -0.82
NEK1-203ENST00000507142 ARIH2O95376 493 aa9.95□□□□□ -0.82
NEK1-203ENST00000507142 RWDD2BP57060 319 aa9.95□□□□□ -0.82
NEK1-203ENST00000507142 YWHAGP61981 247 aaKnown RBP eCLIP9.95□□□□□ -0.82
NEK1-203ENST00000507142 CFAP157Q5JU67 520 aa9.95□□□□□ -0.82
NEK1-203ENST00000507142 RABGAP1LQ5R372 815 aa9.95□□□□□ -0.82
NEK1-203ENST00000507142 RARS2Q5T160 578 aaKnown RBP9.95□□□□□ -0.82
NEK1-203ENST00000507142 SMARCD1Q96GM5 515 aa9.95□□□□□ -0.82
NEK1-203ENST00000507142 SELENOSQ9BQE4 189 aa9.95□□□□□ -0.82
NEK1-203ENST00000507142 ELOVL4Q9GZR5 314 aa9.95□□□□□ -0.82
NEK1-203ENST00000507142 SLC25A13Q9UJS0 675 aa9.95□□□□□ -0.82
NEK1-203ENST00000507142 ZDHHC9Q9Y397 364 aa9.95□□□□□ -0.82
NEK1-203ENST00000507142 SAR1BQ9Y6B6 198 aa9.95□□□□□ -0.82
NEK1-203ENST00000507142 ARFGEF2Q9Y6D5 1785 aa9.95□□□□□ -0.82
NEK1-203ENST00000507142 COL18A1P39060 1754 aa9.95□□□□□ -0.82
NEK1-203ENST00000507142 ANKRD63C9JTQ0 380 aa9.95□□□□□ -0.82
NEK1-203ENST00000507142 S100BP04271 92 aaPredicted RBP9.95□□□□□ -0.82
NEK1-203ENST00000507142 RPL9P32969 192 aaKnown RBP9.95□□□□□ -0.82
NEK1-203ENST00000507142 IRF5Q13568 498 aa9.95□□□□□ -0.82
NEK1-203ENST00000507142 MAP4K3Q8IVH8 894 aa9.95□□□□□ -0.82
NEK1-203ENST00000507142 CCDC170Q8IYT3 715 aa9.95□□□□□ -0.82
NEK1-203ENST00000507142 P3H4Q92791 437 aa9.95□□□□□ -0.82
NEK1-203ENST00000507142 ABHD8Q96I13 439 aa9.95□□□□□ -0.82
NEK1-203ENST00000507142 RBM41Q96IZ5 413 aaKnown RBP9.95□□□□□ -0.82
NEK1-203ENST00000507142 SLC27A5Q9Y2P5 690 aa9.95□□□□□ -0.82
NEK1-203ENST00000507142 PPP2R2CQ9Y2T4 447 aa9.95□□□□□ -0.82
NEK1-203ENST00000507142 TRIM66O15016 1216 aa9.95□□□□□ -0.82
NEK1-203ENST00000507142 ZRANB2O95218 330 aaKnown RBP eCLIP9.95□□□□□ -0.82
NEK1-203ENST00000507142 BRCC3P46736 316 aa9.95□□□□□ -0.82
NEK1-203ENST00000507142 TKTL1P51854 596 aa9.95□□□□□ -0.82
NEK1-203ENST00000507142 SLC12A3P55017 1021 aa9.95□□□□□ -0.82
NEK1-203ENST00000507142 VSTM4Q8IW00 320 aa9.95□□□□□ -0.82
NEK1-203ENST00000507142 TMEM176AQ96HP8 235 aa9.95□□□□□ -0.82
NEK1-203ENST00000507142 HEMGNQ9BXL5 484 aa9.95□□□□□ -0.82
NEK1-203ENST00000507142 TRAV19A0A0A6YYK7 116 aa9.94□□□□□ -0.82
NEK1-203ENST00000507142 M0QYT0 321 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms