RNA–Protein interactions for RNA: ENST00000506981.1

LMNA-221, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-221ENST00000506981 ZNF516Q92618 1163 aa20.76■□□□□ 0.91
LMNA-221ENST00000506981 ZNF707Q96C28 371 aaPredicted RBP20.76■□□□□ 0.91
LMNA-221ENST00000506981 CLSTN2Q9H4D0 955 aa20.76■□□□□ 0.91
LMNA-221ENST00000506981 KIAA1468Q9P260 1216 aa20.76■□□□□ 0.91
LMNA-221ENST00000506981 L1RE1Q9UN81 338 aa20.76■□□□□ 0.91
LMNA-221ENST00000506981 CLUHO75153 1309 aa20.76■□□□□ 0.91
LMNA-221ENST00000506981 BICDL2A1A5D9 508 aa20.75■□□□□ 0.91
LMNA-221ENST00000506981 C19orf67A6NJJ6 358 aa20.75■□□□□ 0.91
LMNA-221ENST00000506981 IKBKBO14920 756 aa20.75■□□□□ 0.91
LMNA-221ENST00000506981 CCL16O15467 120 aa20.75■□□□□ 0.91
LMNA-221ENST00000506981 ATICP31939 592 aa20.75■□□□□ 0.91
LMNA-221ENST00000506981 DLG4P78352 724 aa20.75■□□□□ 0.91
LMNA-221ENST00000506981 TSPY1Q01534 308 aa20.75■□□□□ 0.91
LMNA-221ENST00000506981 ENPEPQ07075 957 aa20.75■□□□□ 0.91
LMNA-221ENST00000506981 GPR17Q13304 367 aa20.75■□□□□ 0.91
LMNA-221ENST00000506981 ANKRD40Q6AI12 368 aa20.75■□□□□ 0.91
LMNA-221ENST00000506981 RNF19BQ6ZMZ0 732 aa20.75■□□□□ 0.91
LMNA-221ENST00000506981 DPH6Q7L8W6 267 aa20.75■□□□□ 0.91
LMNA-221ENST00000506981 DCP1BQ8IZD4 617 aaKnown RBP20.75■□□□□ 0.91
LMNA-221ENST00000506981 ADGRF2Q8IZF7 708 aa20.75■□□□□ 0.91
LMNA-221ENST00000506981 ELMOD1Q8N336 334 aa20.75■□□□□ 0.91
LMNA-221ENST00000506981 TDRD5Q8NAT2 981 aaKnown RBP20.75■□□□□ 0.91
LMNA-221ENST00000506981 PGLYRP2Q96PD5 576 aa20.75■□□□□ 0.91
LMNA-221ENST00000506981 MMS19Q96T76 1030 aa20.75■□□□□ 0.91
LMNA-221ENST00000506981 GZF1Q9H116 711 aaPredicted RBP20.75■□□□□ 0.91
LMNA-221ENST00000506981 NUP62CLQ9H1M0 184 aa20.75■□□□□ 0.91
LMNA-221ENST00000506981 LMBRD1Q9NUN5 540 aa20.75■□□□□ 0.91
LMNA-221ENST00000506981 INSL5Q9Y5Q6 135 aa20.75■□□□□ 0.91
LMNA-221ENST00000506981 MYH10P35580 1976 aa20.75■□□□□ 0.91
LMNA-221ENST00000506981 TRIM49BA6NDI0 452 aa20.74■□□□□ 0.91
LMNA-221ENST00000506981 LOC730098B7Z3J9 87 aa20.74■□□□□ 0.91
LMNA-221ENST00000506981 SLC16A3O15427 465 aaKnown RBP20.74■□□□□ 0.91
LMNA-221ENST00000506981 PAPLNO95428 1278 aa20.74■□□□□ 0.91
LMNA-221ENST00000506981 POU2F2P09086 479 aa20.74■□□□□ 0.91
LMNA-221ENST00000506981 LHX1P48742 406 aa20.74■□□□□ 0.91
LMNA-221ENST00000506981 PLD1Q13393 1074 aa20.74■□□□□ 0.91
LMNA-221ENST00000506981 ZNF699Q32M78 642 aa20.74■□□□□ 0.91
LMNA-221ENST00000506981 TDRD10Q5VZ19 366 aaKnown RBP20.74■□□□□ 0.91
LMNA-221ENST00000506981 OTOP3Q7RTS5 596 aa20.74■□□□□ 0.91
LMNA-221ENST00000506981 OR10T2Q8NGX3 314 aa20.74■□□□□ 0.91
LMNA-221ENST00000506981 ACSF2Q96CM8 615 aaPredicted RBP20.74■□□□□ 0.91
LMNA-221ENST00000506981 NOTCH4Q99466 2003 aa20.74■□□□□ 0.91
LMNA-221ENST00000506981 ZCWPW1Q9H0M4 648 aa20.74■□□□□ 0.91
LMNA-221ENST00000506981 WDR6Q9NNW5 1121 aaKnown RBP20.74■□□□□ 0.91
LMNA-221ENST00000506981 DDX43Q9NXZ2 648 aaKnown RBP20.74■□□□□ 0.91
LMNA-221ENST00000506981 CTNND2Q9UQB3 1225 aa20.74■□□□□ 0.91
LMNA-221ENST00000506981 C5orf42Q9H799 3197 aa20.73■□□□□ 0.91
LMNA-221ENST00000506981 A0A0C4DFX4 3053 aa20.73■□□□□ 0.91
LMNA-221ENST00000506981 PTPRDP23468 1912 aa20.73■□□□□ 0.91
LMNA-221ENST00000506981 STX10O60499 249 aa20.73■□□□□ 0.91
LMNA-221ENST00000506981 SEC24AO95486 1093 aa20.73■□□□□ 0.91
LMNA-221ENST00000506981 STAU1O95793 577 aaKnown RBP20.73■□□□□ 0.91
LMNA-221ENST00000506981 CST3P01034 146 aaPredicted RBP20.73■□□□□ 0.91
LMNA-221ENST00000506981 C4BPAP04003 597 aaKnown RBP20.73■□□□□ 0.91
LMNA-221ENST00000506981 TRIM49P0CI25 452 aa20.73■□□□□ 0.91
LMNA-221ENST00000506981 TRIM49CP0CI26 452 aa20.73■□□□□ 0.91
LMNA-221ENST00000506981 PCSK1P29120 753 aa20.73■□□□□ 0.91
LMNA-221ENST00000506981 PIK3CAP42336 1068 aa20.73■□□□□ 0.91
LMNA-221ENST00000506981 MYL6P60660 151 aa20.73■□□□□ 0.91
LMNA-221ENST00000506981 SMARCB1Q12824 385 aa20.73■□□□□ 0.91
LMNA-221ENST00000506981 PAK1Q13153 545 aa20.73■□□□□ 0.91
LMNA-221ENST00000506981 NCOA4Q13772 614 aa20.73■□□□□ 0.91
LMNA-221ENST00000506981 WDR72Q3MJ13 1102 aa20.73■□□□□ 0.91
LMNA-221ENST00000506981 SLC39A12Q504Y0 691 aa20.73■□□□□ 0.91
LMNA-221ENST00000506981 SCARA3Q6AZY7 606 aa20.73■□□□□ 0.91
LMNA-221ENST00000506981 FEZF2Q8TBJ5 459 aa20.73■□□□□ 0.91
LMNA-221ENST00000506981 NELFBQ8WX92 580 aa20.73■□□□□ 0.91
LMNA-221ENST00000506981 EEF2KMTQ96G04 330 aa20.73■□□□□ 0.91
LMNA-221ENST00000506981 TMEM209Q96SK2 561 aa20.73■□□□□ 0.91
LMNA-221ENST00000506981 IMPG2Q9BZV3 1241 aa20.73■□□□□ 0.91
LMNA-221ENST00000506981 MMRN2Q9H8L6 949 aa20.73■□□□□ 0.91
LMNA-221ENST00000506981 USTQ9Y2C2 406 aa20.73■□□□□ 0.91
LMNA-221ENST00000506981 MTMR11A4FU01 709 aa20.72■□□□□ 0.91
LMNA-221ENST00000506981 P4HA1P13674 534 aa20.72■□□□□ 0.91
LMNA-221ENST00000506981 CD44P16070 742 aaKnown RBP20.72■□□□□ 0.91
LMNA-221ENST00000506981 BMP6P22004 513 aa20.72■□□□□ 0.91
LMNA-221ENST00000506981 PMS1P54277 932 aaKnown RBP20.72■□□□□ 0.91
LMNA-221ENST00000506981 SOWAHAQ2M3V2 549 aa20.72■□□□□ 0.91
LMNA-221ENST00000506981 ZACNQ401N2 412 aa20.72■□□□□ 0.91
LMNA-221ENST00000506981 ZNF667Q5HYK9 610 aa20.72■□□□□ 0.91
LMNA-221ENST00000506981 SV2AQ7L0J3 742 aa20.72■□□□□ 0.91
LMNA-221ENST00000506981 GRASPQ7Z6J2 395 aaPredicted RBP20.72■□□□□ 0.91
LMNA-221ENST00000506981 PLCD3Q8N3E9 789 aa20.72■□□□□ 0.91
LMNA-221ENST00000506981 C2orf15Q8WU43 125 aaKnown RBP20.72■□□□□ 0.91
LMNA-221ENST00000506981 RTP3Q9BQQ7 232 aa20.72■□□□□ 0.91
LMNA-221ENST00000506981 ACBD6Q9BR61 282 aa20.72■□□□□ 0.91
LMNA-221ENST00000506981 CD320Q9NPF0 282 aa20.72■□□□□ 0.91
LMNA-221ENST00000506981 NXF1Q9UBU9 619 aaKnown RBP20.72■□□□□ 0.91
LMNA-221ENST00000506981 BDP1A6H8Y1 2624 aa20.71■□□□□ 0.91
LMNA-221ENST00000506981 PPP1R3GB7ZBB8 358 aa20.71■□□□□ 0.91
LMNA-221ENST00000506981 GBP2P32456 591 aaPredicted RBP20.71■□□□□ 0.91
LMNA-221ENST00000506981 ALDH1A3P47895 512 aa20.71■□□□□ 0.91
LMNA-221ENST00000506981 TWF1Q12792 350 aa20.71■□□□□ 0.91
LMNA-221ENST00000506981 DUSP4Q13115 394 aa20.71■□□□□ 0.91
LMNA-221ENST00000506981 NFE2Q16621 373 aaPredicted RBP20.71■□□□□ 0.91
LMNA-221ENST00000506981 DCAF17Q5H9S7 520 aaPredicted RBP20.71■□□□□ 0.91
LMNA-221ENST00000506981 TCERG1LQ5VWI1 586 aa20.71■□□□□ 0.91
LMNA-221ENST00000506981 IQCEQ6IPM2 695 aa20.71■□□□□ 0.91
LMNA-221ENST00000506981 GET4Q7L5D6 327 aaPredicted RBP20.71■□□□□ 0.91
LMNA-221ENST00000506981 ZC3H3Q8IXZ2 948 aaKnown RBP20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms