RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 CMASQ8NFW8 434 aaPredicted RBP21.35■■□□□ 1.01
SNX25-204ENST00000506896 ZNF461Q8TAF7 563 aa21.35■■□□□ 1.01
SNX25-204ENST00000506896 SYAP1Q96A49 352 aaPredicted RBP21.35■■□□□ 1.01
SNX25-204ENST00000506896 RHOBTB2Q9BYZ6 727 aa21.35■■□□□ 1.01
SNX25-204ENST00000506896 MAFFQ9ULX9 164 aa21.35■■□□□ 1.01
SNX25-204ENST00000506896 CTNND2Q9UQB3 1225 aa21.35■■□□□ 1.01
SNX25-204ENST00000506896 SNX9Q9Y5X1 595 aa21.35■■□□□ 1.01
SNX25-204ENST00000506896 DENND4AQ7Z401 1863 aa21.35■■□□□ 1.01
SNX25-204ENST00000506896 STX10O60499 249 aa21.34■■□□□ 1.01
SNX25-204ENST00000506896 C4BPAP04003 597 aaKnown RBP21.34■■□□□ 1.01
SNX25-204ENST00000506896 ZACNQ401N2 412 aa21.34■■□□□ 1.01
SNX25-204ENST00000506896 LIN9Q5TKA1 542 aa21.34■■□□□ 1.01
SNX25-204ENST00000506896 TDRD10Q5VZ19 366 aaKnown RBP21.34■■□□□ 1.01
SNX25-204ENST00000506896 CYP26C1Q6V0L0 522 aa21.34■■□□□ 1.01
SNX25-204ENST00000506896 C15orf39Q6ZRI6 1047 aa21.34■■□□□ 1.01
SNX25-204ENST00000506896 EEF2KMTQ96G04 330 aa21.34■■□□□ 1.01
SNX25-204ENST00000506896 METTL14Q9HCE5 456 aaKnown RBP21.34■■□□□ 1.01
SNX25-204ENST00000506896 ZDHHC7Q9NXF8 308 aa21.34■■□□□ 1.01
SNX25-204ENST00000506896 ABLIM3O94929 683 aa21.33■■□□□ 1.01
SNX25-204ENST00000506896 CST3P01034 146 aaPredicted RBP21.33■■□□□ 1.01
SNX25-204ENST00000506896 SPATA31D3P0C874 917 aa21.33■■□□□ 1.01
SNX25-204ENST00000506896 NCOA4Q13772 614 aa21.33■■□□□ 1.01
SNX25-204ENST00000506896 UVSSAQ2YD98 709 aa21.33■■□□□ 1.01
SNX25-204ENST00000506896 WSCD1Q658N2 575 aa21.33■■□□□ 1.01
SNX25-204ENST00000506896 SPATA31D4Q6ZUB0 917 aa21.33■■□□□ 1.01
SNX25-204ENST00000506896 SV2AQ7L0J3 742 aa21.33■■□□□ 1.01
SNX25-204ENST00000506896 FILIP1Q7Z7B0 1213 aa21.33■■□□□ 1.01
SNX25-204ENST00000506896 DUSP9Q99956 384 aaKnown RBP21.33■■□□□ 1.01
SNX25-204ENST00000506896 LRFN3Q9BTN0 628 aa21.33■■□□□ 1.01
SNX25-204ENST00000506896 VRTNQ9H8Y1 702 aa21.33■■□□□ 1.01
SNX25-204ENST00000506896 DACH1Q9UI36 760 aa21.33■■□□□ 1.01
SNX25-204ENST00000506896 MUTYHQ9UIF7 546 aa21.33■■□□□ 1.01
SNX25-204ENST00000506896 RWDD2AQ9UIY3 292 aa21.33■■□□□ 1.01
SNX25-204ENST00000506896 CCDC195A0A1B0GUA6 201 aa21.32■■□□□ 1
SNX25-204ENST00000506896 WDR27A2RRH5 827 aa21.32■■□□□ 1
SNX25-204ENST00000506896 FGFR1OPO95684 399 aaKnown RBP21.32■■□□□ 1
SNX25-204ENST00000506896 CPB1P15086 417 aa21.32■■□□□ 1
SNX25-204ENST00000506896 ATF2P15336 505 aa21.32■■□□□ 1
SNX25-204ENST00000506896 ELF1P32519 619 aa21.32■■□□□ 1
SNX25-204ENST00000506896 ARPP19P56211 112 aa21.32■■□□□ 1
SNX25-204ENST00000506896 TMEM31Q5JXX7 168 aa21.32■■□□□ 1
SNX25-204ENST00000506896 C1orf220Q5T0J3 134 aa21.32■■□□□ 1
SNX25-204ENST00000506896 SCARA3Q6AZY7 606 aa21.32■■□□□ 1
SNX25-204ENST00000506896 RBM43Q6ZSC3 357 aaKnown RBP21.32■■□□□ 1
SNX25-204ENST00000506896 CCDC149Q6ZUS6 474 aa21.32■■□□□ 1
SNX25-204ENST00000506896 PDCL2Q8N4E4 241 aa21.32■■□□□ 1
SNX25-204ENST00000506896 ARMCX3Q9UH62 379 aaPredicted RBP21.32■■□□□ 1
SNX25-204ENST00000506896 L1RE1Q9UN81 338 aa21.32■■□□□ 1
SNX25-204ENST00000506896 NR2E1Q9Y466 385 aa21.32■■□□□ 1
SNX25-204ENST00000506896 DOCK6Q96HP0 2047 aa21.32■■□□□ 1
SNX25-204ENST00000506896 TSC2P49815 1807 aa21.32■■□□□ 1
SNX25-204ENST00000506896 RFPL2O75678 378 aa21.31■■□□□ 1
SNX25-204ENST00000506896 ZMYND10O75800 440 aa21.31■■□□□ 1
SNX25-204ENST00000506896 GNA14O95837 355 aa21.31■■□□□ 1
SNX25-204ENST00000506896 HNRNPA1P09651 372 aaKnown RBP eCLIP21.31■■□□□ 1
SNX25-204ENST00000506896 FAM163BP0C2L3 166 aa21.31■■□□□ 1
SNX25-204ENST00000506896 TRIM49P0CI25 452 aa21.31■■□□□ 1
SNX25-204ENST00000506896 TRIM49CP0CI26 452 aa21.31■■□□□ 1
SNX25-204ENST00000506896 HOXA9P31269 272 aa21.31■■□□□ 1
SNX25-204ENST00000506896 LHX1P48742 406 aa21.31■■□□□ 1
SNX25-204ENST00000506896 NLRP12P59046 1061 aa21.31■■□□□ 1
SNX25-204ENST00000506896 MYL6P60660 151 aa21.31■■□□□ 1
SNX25-204ENST00000506896 TNNC1P63316 161 aa21.31■■□□□ 1
SNX25-204ENST00000506896 GPR17Q13304 367 aa21.31■■□□□ 1
SNX25-204ENST00000506896 SGSM1Q2NKQ1 1148 aa21.31■■□□□ 1
SNX25-204ENST00000506896 LIMS2Q7Z4I7 341 aa21.31■■□□□ 1
SNX25-204ENST00000506896 FRMD5Q7Z6J6 570 aa21.31■■□□□ 1
SNX25-204ENST00000506896 TAF4BQ92750 862 aa21.31■■□□□ 1
SNX25-204ENST00000506896 XYLT2Q9H1B5 865 aa21.31■■□□□ 1
SNX25-204ENST00000506896 TMEM8AQ9HCN3 771 aa21.31■■□□□ 1
SNX25-204ENST00000506896 AFF4Q9UHB7 1163 aaKnown RBP21.31■■□□□ 1
SNX25-204ENST00000506896 USTQ9Y2C2 406 aa21.31■■□□□ 1
SNX25-204ENST00000506896 TECTAO75443 2155 aa21.31■■□□□ 1
SNX25-204ENST00000506896 C2CD4DB7Z1M9 353 aa21.3■■□□□ 1
SNX25-204ENST00000506896 C8AP07357 584 aa21.3■■□□□ 1
SNX25-204ENST00000506896 PTMSP20962 102 aa21.3■■□□□ 1
SNX25-204ENST00000506896 GCLMP48507 274 aa21.3■■□□□ 1
SNX25-204ENST00000506896 STX17P56962 302 aa21.3■■□□□ 1
SNX25-204ENST00000506896 SMARCB1Q12824 385 aa21.3■■□□□ 1
SNX25-204ENST00000506896 SOWAHAQ2M3V2 549 aa21.3■■□□□ 1
SNX25-204ENST00000506896 ZNF699Q32M78 642 aa21.3■■□□□ 1
SNX25-204ENST00000506896 WDR72Q3MJ13 1102 aa21.3■■□□□ 1
SNX25-204ENST00000506896 CT47A1Q5JQC4 288 aaPredicted RBP21.3■■□□□ 1
SNX25-204ENST00000506896 CCDC183Q5T5S1 534 aa21.3■■□□□ 1
SNX25-204ENST00000506896 KRT39Q6A163 491 aa21.3■■□□□ 1
SNX25-204ENST00000506896 TCEAL8Q8IYN2 117 aa21.3■■□□□ 1
SNX25-204ENST00000506896 ADGRF2Q8IZF7 708 aa21.3■■□□□ 1
SNX25-204ENST00000506896 ZNF707Q96C28 371 aaPredicted RBP21.3■■□□□ 1
SNX25-204ENST00000506896 IMPG2Q9BZV3 1241 aa21.3■■□□□ 1
SNX25-204ENST00000506896 FAM86C2PA6NEL3 165 aa21.29■■□□□ 1
SNX25-204ENST00000506896 GABRDO14764 452 aa21.29■■□□□ 1
SNX25-204ENST00000506896 VNN1O95497 513 aa21.29■■□□□ 1
SNX25-204ENST00000506896 POU2F2P09086 479 aa21.29■■□□□ 1
SNX25-204ENST00000506896 P4HA1P13674 534 aa21.29■■□□□ 1
SNX25-204ENST00000506896 PIK3CAP42336 1068 aa21.29■■□□□ 1
SNX25-204ENST00000506896 MYL7Q01449 175 aa21.29■■□□□ 1
SNX25-204ENST00000506896 TSPY1Q01534 308 aa21.29■■□□□ 1
SNX25-204ENST00000506896 PPP3CAQ08209 521 aa21.29■■□□□ 1
SNX25-204ENST00000506896 CCDC40Q4G0X9 1142 aa21.29■■□□□ 1
SNX25-204ENST00000506896 PPM1LQ5SGD2 360 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms