RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 IZUMO2Q6UXV1 221 aa18.02■□□□□ 0.48
SQSTM1-211ENST00000506690 CAPN12Q6ZSI9 719 aa18.02■□□□□ 0.48
SQSTM1-211ENST00000506690 OGFOD1Q8N543 542 aa18.02■□□□□ 0.48
SQSTM1-211ENST00000506690 XXYLT1Q8NBI6 393 aa18.02■□□□□ 0.48
SQSTM1-211ENST00000506690 ZSWIM2Q8NEG5 633 aa18.02■□□□□ 0.48
SQSTM1-211ENST00000506690 GRAPLQ8TC17 118 aaPredicted RBP18.02■□□□□ 0.48
SQSTM1-211ENST00000506690 DCAF4Q8WV16 495 aa18.02■□□□□ 0.48
SQSTM1-211ENST00000506690 TSSK1BQ9BXA7 367 aa18.02■□□□□ 0.48
SQSTM1-211ENST00000506690 STK32BQ9NY57 414 aa18.02■□□□□ 0.48
SQSTM1-211ENST00000506690 IL1RAPL1Q9NZN1 696 aa18.02■□□□□ 0.48
SQSTM1-211ENST00000506690 ATXN10Q9UBB4 475 aa18.02■□□□□ 0.48
SQSTM1-211ENST00000506690 K7ENM7 598 aa18.02■□□□□ 0.47
SQSTM1-211ENST00000506690 PROSCO94903 275 aa18.02■□□□□ 0.47
SQSTM1-211ENST00000506690 PENKP01210 267 aaPredicted RBP18.02■□□□□ 0.47
SQSTM1-211ENST00000506690 ANPEPP15144 967 aa18.02■□□□□ 0.47
SQSTM1-211ENST00000506690 MCCD1P59942 119 aaPredicted RBP18.02■□□□□ 0.47
SQSTM1-211ENST00000506690 ZBTB16Q05516 673 aa18.02■□□□□ 0.47
SQSTM1-211ENST00000506690 MORF4L2Q15014 288 aa18.02■□□□□ 0.47
SQSTM1-211ENST00000506690 DLGAP5Q15398 846 aa18.02■□□□□ 0.47
SQSTM1-211ENST00000506690 LRRC6Q86X45 466 aa18.02■□□□□ 0.47
SQSTM1-211ENST00000506690 KATNAL2Q8IYT4 538 aa18.02■□□□□ 0.47
SQSTM1-211ENST00000506690 ZBED8Q8IZ13 594 aa18.02■□□□□ 0.47
SQSTM1-211ENST00000506690 MZB1Q8WU39 189 aa18.02■□□□□ 0.47
SQSTM1-211ENST00000506690 ECSITQ9BQ95 431 aa18.02■□□□□ 0.47
SQSTM1-211ENST00000506690 CENPKQ9BS16 269 aa18.02■□□□□ 0.47
SQSTM1-211ENST00000506690 TMEM206Q9H813 350 aa18.02■□□□□ 0.47
SQSTM1-211ENST00000506690 HSPBP1Q9NZL4 362 aa18.02■□□□□ 0.47
SQSTM1-211ENST00000506690 DNAJB4Q9UDY4 337 aa18.02■□□□□ 0.47
SQSTM1-211ENST00000506690 PYGBP11216 843 aa18.01■□□□□ 0.47
SQSTM1-211ENST00000506690 SEPT7Q16181 437 aaKnown RBP18.01■□□□□ 0.47
SQSTM1-211ENST00000506690 RHOT1Q8IXI2 618 aa18.01■□□□□ 0.47
SQSTM1-211ENST00000506690 BANPQ8N9N5 519 aa18.01■□□□□ 0.47
SQSTM1-211ENST00000506690 WDR18Q9BV38 432 aa18.01■□□□□ 0.47
SQSTM1-211ENST00000506690 RABGEF1Q9UJ41 708 aa18.01■□□□□ 0.47
SQSTM1-211ENST00000506690 LIASO43766 372 aa18.01■□□□□ 0.47
SQSTM1-211ENST00000506690 ZSCAN5DPP0CG00 497 aa18.01■□□□□ 0.47
SQSTM1-211ENST00000506690 TAS2R40P59535 323 aa18.01■□□□□ 0.47
SQSTM1-211ENST00000506690 GPX6P59796 221 aa18.01■□□□□ 0.47
SQSTM1-211ENST00000506690 NET1Q7Z628 596 aaPredicted RBP18.01■□□□□ 0.47
SQSTM1-211ENST00000506690 TTC7BQ86TV6 843 aa18.01■□□□□ 0.47
SQSTM1-211ENST00000506690 STKLD1Q8NE28 680 aa18.01■□□□□ 0.47
SQSTM1-211ENST00000506690 DHRS4Q9BTZ2 278 aa18.01■□□□□ 0.47
SQSTM1-211ENST00000506690 PHACTR1Q9C0D0 580 aa18.01■□□□□ 0.47
SQSTM1-211ENST00000506690 SLC17A7Q9P2U7 560 aa18.01■□□□□ 0.47
SQSTM1-211ENST00000506690 SH3BP1Q9Y3L3 701 aa18.01■□□□□ 0.47
SQSTM1-211ENST00000506690 C6orf229H3BNL8 230 aa18■□□□□ 0.47
SQSTM1-211ENST00000506690 HOXA13P31271 388 aaPredicted RBP18■□□□□ 0.47
SQSTM1-211ENST00000506690 PRELPP51888 382 aa18■□□□□ 0.47
SQSTM1-211ENST00000506690 SNAP25P60880 206 aa18■□□□□ 0.47
SQSTM1-211ENST00000506690 USH1GQ495M9 461 aa18■□□□□ 0.47
SQSTM1-211ENST00000506690 ADGRD1Q6QNK2 874 aa18■□□□□ 0.47
SQSTM1-211ENST00000506690 CENPUQ71F23 418 aa18■□□□□ 0.47
SQSTM1-211ENST00000506690 FBXO11Q86XK2 927 aa18■□□□□ 0.47
SQSTM1-211ENST00000506690 MYLK4Q86YV6 388 aaPredicted RBP18■□□□□ 0.47
SQSTM1-211ENST00000506690 EXD1Q8NHP7 514 aa18■□□□□ 0.47
SQSTM1-211ENST00000506690 MKL1Q969V6 931 aa18■□□□□ 0.47
SQSTM1-211ENST00000506690 FAM161BQ96MY7 647 aa18■□□□□ 0.47
SQSTM1-211ENST00000506690 FNBP1Q96RU3 617 aa18■□□□□ 0.47
SQSTM1-211ENST00000506690 C12orf65Q9H3J6 166 aaKnown RBP18■□□□□ 0.47
SQSTM1-211ENST00000506690 CHCHD3Q9NX63 227 aaKnown RBP18■□□□□ 0.47
SQSTM1-211ENST00000506690 SEC23IPQ9Y6Y8 1000 aaKnown RBP18■□□□□ 0.47
SQSTM1-211ENST00000506690 LY75O60449 1722 aa18■□□□□ 0.47
SQSTM1-211ENST00000506690 FCHO1O14526 889 aa18■□□□□ 0.47
SQSTM1-211ENST00000506690 RAD21O60216 631 aa18■□□□□ 0.47
SQSTM1-211ENST00000506690 ARSEP51690 589 aa18■□□□□ 0.47
SQSTM1-211ENST00000506690 PDIA2Q13087 525 aaKnown RBP18■□□□□ 0.47
SQSTM1-211ENST00000506690 PRKD1Q15139 912 aaPredicted RBP18■□□□□ 0.47
SQSTM1-211ENST00000506690 RNASEH2BQ5TBB1 312 aaKnown RBP18■□□□□ 0.47
SQSTM1-211ENST00000506690 SLFN13Q68D06 897 aa18■□□□□ 0.47
SQSTM1-211ENST00000506690 DRICH1Q6PGQ1 229 aaPredicted RBP18■□□□□ 0.47
SQSTM1-211ENST00000506690 MARK2Q7KZI7 788 aaKnown RBP18■□□□□ 0.47
SQSTM1-211ENST00000506690 TMPRSS6Q8IU80 811 aa18■□□□□ 0.47
SQSTM1-211ENST00000506690 ALKBH8Q96BT7 664 aaKnown RBP18■□□□□ 0.47
SQSTM1-211ENST00000506690 OXNAD1Q96HP4 312 aaPredicted RBP18■□□□□ 0.47
SQSTM1-211ENST00000506690 OLFM3Q96PB7 478 aa18■□□□□ 0.47
SQSTM1-211ENST00000506690 RANBP17Q9H2T7 1088 aaKnown RBP18■□□□□ 0.47
SQSTM1-211ENST00000506690 DNPEPQ9ULA0 475 aa18■□□□□ 0.47
SQSTM1-211ENST00000506690 TMCO1Q9UM00 188 aa18■□□□□ 0.47
SQSTM1-211ENST00000506690 COQ4Q9Y3A0 265 aa18■□□□□ 0.47
SQSTM1-211ENST00000506690 LOXHD1Q8IVV2 1947 aa18■□□□□ 0.47
SQSTM1-211ENST00000506690 IL1BP01584 269 aa17.99■□□□□ 0.47
SQSTM1-211ENST00000506690 DHRS4L1P0CG22 281 aa17.99■□□□□ 0.47
SQSTM1-211ENST00000506690 GPC3P51654 580 aa17.99■□□□□ 0.47
SQSTM1-211ENST00000506690 GPSM2P81274 684 aa17.99■□□□□ 0.47
SQSTM1-211ENST00000506690 GPS1Q13098 491 aa17.99■□□□□ 0.47
SQSTM1-211ENST00000506690 EAPPQ56P03 285 aaPredicted RBP17.99■□□□□ 0.47
SQSTM1-211ENST00000506690 CHSY1Q86X52 802 aa17.99■□□□□ 0.47
SQSTM1-211ENST00000506690 ALLCQ8N6M5 410 aa17.99■□□□□ 0.47
SQSTM1-211ENST00000506690 KLHL23Q8NBE8 558 aa17.99■□□□□ 0.47
SQSTM1-211ENST00000506690 CCDC110Q8TBZ0 833 aa17.99■□□□□ 0.47
SQSTM1-211ENST00000506690 DHX38Q92620 1227 aaKnown RBP17.99■□□□□ 0.47
SQSTM1-211ENST00000506690 PPP2R3CQ969Q6 453 aa17.99■□□□□ 0.47
SQSTM1-211ENST00000506690 CLUHO75153 1309 aa17.99■□□□□ 0.47
SQSTM1-211ENST00000506690 LGR5O75473 907 aa17.99■□□□□ 0.47
SQSTM1-211ENST00000506690 ADRB2P07550 413 aa17.99■□□□□ 0.47
SQSTM1-211ENST00000506690 PABPC4LP0CB38 370 aaKnown RBP17.99■□□□□ 0.47
SQSTM1-211ENST00000506690 ETS1P14921 441 aa17.99■□□□□ 0.47
SQSTM1-211ENST00000506690 RBM5P52756 815 aaKnown RBP eCLIP17.99■□□□□ 0.47
SQSTM1-211ENST00000506690 ARL4CP56559 192 aa17.99■□□□□ 0.47
SQSTM1-211ENST00000506690 ACTR3P61158 418 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms