RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 NAT14Q8WUY8 206 aa16.75■□□□□ 0.27
SCLT1-208ENST00000506368 GFM2Q969S9 779 aaKnown RBP16.75■□□□□ 0.27
SCLT1-208ENST00000506368 FAM163AQ96GL9 167 aaPredicted RBP16.75■□□□□ 0.27
SCLT1-208ENST00000506368 PLEKHG4BQ96PX9 1271 aa16.75■□□□□ 0.27
SCLT1-208ENST00000506368 TSSK1BQ9BXA7 367 aa16.75■□□□□ 0.27
SCLT1-208ENST00000506368 TMEM206Q9H813 350 aa16.75■□□□□ 0.27
SCLT1-208ENST00000506368 POLLQ9UGP5 575 aa16.75■□□□□ 0.27
SCLT1-208ENST00000506368 FOCADQ5VW36 1801 aa16.75■□□□□ 0.27
SCLT1-208ENST00000506368 POC1B-GALNT4F8VUJ3 575 aa16.74■□□□□ 0.27
SCLT1-208ENST00000506368 IPO5O00410 1097 aaKnown RBP16.74■□□□□ 0.27
SCLT1-208ENST00000506368 UBTFL6P0CB48 400 aaPredicted RBP16.74■□□□□ 0.27
SCLT1-208ENST00000506368 MAPTP10636 758 aaKnown RBP16.74■□□□□ 0.27
SCLT1-208ENST00000506368 PLS3P13797 630 aa16.74■□□□□ 0.27
SCLT1-208ENST00000506368 DESP17661 470 aa16.74■□□□□ 0.27
SCLT1-208ENST00000506368 ADSSP30520 456 aa16.74■□□□□ 0.27
SCLT1-208ENST00000506368 MAP3K10Q02779 954 aa16.74■□□□□ 0.27
SCLT1-208ENST00000506368 ASPHQ12797 758 aa16.74■□□□□ 0.27
SCLT1-208ENST00000506368 PLEKHG4Q58EX7 1191 aa16.74■□□□□ 0.27
SCLT1-208ENST00000506368 PCNX4Q63HM2 1172 aa16.74■□□□□ 0.27
SCLT1-208ENST00000506368 KYAT3Q6YP21 454 aaKnown RBP16.74■□□□□ 0.27
SCLT1-208ENST00000506368 C4orf33Q8N1A6 199 aa16.74■□□□□ 0.27
SCLT1-208ENST00000506368 WDR60Q8WVS4 1066 aa16.74■□□□□ 0.27
SCLT1-208ENST00000506368 SHC3Q92529 594 aa16.74■□□□□ 0.27
SCLT1-208ENST00000506368 C1orf21Q9H246 121 aa16.74■□□□□ 0.27
SCLT1-208ENST00000506368 PTTG2Q9NZH5 202 aa16.74■□□□□ 0.27
SCLT1-208ENST00000506368 KANSL3Q9P2N6 904 aa16.74■□□□□ 0.27
SCLT1-208ENST00000506368 SHOC2Q9UQ13 582 aa16.74■□□□□ 0.27
SCLT1-208ENST00000506368 RPS6KL1Q9Y6S9 549 aa16.74■□□□□ 0.27
SCLT1-208ENST00000506368 EMSYQ7Z589 1322 aa16.74■□□□□ 0.27
SCLT1-208ENST00000506368 KLF11O14901 512 aa16.74■□□□□ 0.27
SCLT1-208ENST00000506368 AP1G1O43747 822 aa16.74■□□□□ 0.27
SCLT1-208ENST00000506368 TM7SF2O76062 418 aa16.74■□□□□ 0.27
SCLT1-208ENST00000506368 NMT1P30419 496 aaKnown RBP16.74■□□□□ 0.27
SCLT1-208ENST00000506368 CYP2J2P51589 502 aa16.74■□□□□ 0.27
SCLT1-208ENST00000506368 VAMP7P51809 220 aa16.74■□□□□ 0.27
SCLT1-208ENST00000506368 PRELPP51888 382 aa16.74■□□□□ 0.27
SCLT1-208ENST00000506368 ACBD5Q5T8D3 534 aaPredicted RBP16.74■□□□□ 0.27
SCLT1-208ENST00000506368 KLC3Q6P597 504 aa16.74■□□□□ 0.27
SCLT1-208ENST00000506368 C15orf52Q6ZUT6 534 aaKnown RBP16.74■□□□□ 0.27
SCLT1-208ENST00000506368 PCGF5Q86SE9 256 aa16.74■□□□□ 0.27
SCLT1-208ENST00000506368 KIAA0825Q8IV33 1275 aa16.74■□□□□ 0.27
SCLT1-208ENST00000506368 KBTBD2Q8IY47 623 aa16.74■□□□□ 0.27
SCLT1-208ENST00000506368 DTX3LQ8TDB6 740 aa16.74■□□□□ 0.27
SCLT1-208ENST00000506368 ATG4AQ8WYN0 398 aa16.74■□□□□ 0.27
SCLT1-208ENST00000506368 EIF2AK1Q9BQI3 630 aaKnown RBP16.74■□□□□ 0.27
SCLT1-208ENST00000506368 METTL5Q9NRN9 209 aaKnown RBP16.74■□□□□ 0.27
SCLT1-208ENST00000506368 DNAAF2Q9NVR5 837 aaKnown RBP16.74■□□□□ 0.27
SCLT1-208ENST00000506368 GALNT8Q9NY28 637 aa16.74■□□□□ 0.27
SCLT1-208ENST00000506368 VAV3Q9UKW4 847 aa16.74■□□□□ 0.27
SCLT1-208ENST00000506368 NFKBIEO00221 500 aa16.73■□□□□ 0.27
SCLT1-208ENST00000506368 SGPL1O95470 568 aa16.73■□□□□ 0.27
SCLT1-208ENST00000506368 SREBF1P36956 1147 aa16.73■□□□□ 0.27
SCLT1-208ENST00000506368 TRIP13Q15645 432 aaPredicted RBP16.73■□□□□ 0.27
SCLT1-208ENST00000506368 MAPK6Q16659 721 aa16.73■□□□□ 0.27
SCLT1-208ENST00000506368 P3H1Q32P28 736 aa16.73■□□□□ 0.27
SCLT1-208ENST00000506368 PRR16Q569H4 304 aa16.73■□□□□ 0.27
SCLT1-208ENST00000506368 RINLQ6ZS11 566 aa16.73■□□□□ 0.27
SCLT1-208ENST00000506368 ARHGEF19Q8IW93 802 aa16.73■□□□□ 0.27
SCLT1-208ENST00000506368 TRIM42Q8IWZ5 723 aa16.73■□□□□ 0.27
SCLT1-208ENST00000506368 RHOT1Q8IXI2 618 aa16.73■□□□□ 0.27
SCLT1-208ENST00000506368 KATNAL2Q8IYT4 538 aa16.73■□□□□ 0.27
SCLT1-208ENST00000506368 ZNF276Q8N554 614 aa16.73■□□□□ 0.27
SCLT1-208ENST00000506368 DDX27Q96GQ7 796 aaKnown RBP16.73■□□□□ 0.27
SCLT1-208ENST00000506368 TUBGCP5Q96RT8 1024 aa16.73■□□□□ 0.27
SCLT1-208ENST00000506368 FIZ1Q96SL8 496 aa16.73■□□□□ 0.27
SCLT1-208ENST00000506368 ANAPC7Q9UJX3 599 aa16.73■□□□□ 0.27
SCLT1-208ENST00000506368 RBBP6Q7Z6E9 1792 aaKnown RBP16.73■□□□□ 0.27
SCLT1-208ENST00000506368 A0A0G2JND7 137 aa16.73■□□□□ 0.27
SCLT1-208ENST00000506368 ASLP04424 464 aa16.73■□□□□ 0.27
SCLT1-208ENST00000506368 CYP11B1P15538 503 aa16.73■□□□□ 0.27
SCLT1-208ENST00000506368 KRT4P19013 534 aa16.73■□□□□ 0.27
SCLT1-208ENST00000506368 ZNF746Q6NUN9 644 aaPredicted RBP16.73■□□□□ 0.27
SCLT1-208ENST00000506368 PPP1R2P3Q6NXS1 205 aa16.73■□□□□ 0.27
SCLT1-208ENST00000506368 ADGRD1Q6QNK2 874 aa16.73■□□□□ 0.27
SCLT1-208ENST00000506368 DPP8Q6V1X1 898 aaPredicted RBP16.73■□□□□ 0.27
SCLT1-208ENST00000506368 TXNRD3Q86VQ6 643 aa16.73■□□□□ 0.27
SCLT1-208ENST00000506368 SCUBE1Q8IWY4 988 aa16.73■□□□□ 0.27
SCLT1-208ENST00000506368 LRRC47Q8N1G4 583 aaKnown RBP16.73■□□□□ 0.27
SCLT1-208ENST00000506368 EXD1Q8NHP7 514 aa16.73■□□□□ 0.27
SCLT1-208ENST00000506368 RFWD2Q8NHY2 731 aa16.73■□□□□ 0.27
SCLT1-208ENST00000506368 LENG9Q96B70 501 aa16.73■□□□□ 0.27
SCLT1-208ENST00000506368 LENG1Q96BZ8 264 aaPredicted RBP16.73■□□□□ 0.27
SCLT1-208ENST00000506368 OXNAD1Q96HP4 312 aaPredicted RBP16.73■□□□□ 0.27
SCLT1-208ENST00000506368 STRA6Q9BX79 667 aa16.73■□□□□ 0.27
SCLT1-208ENST00000506368 ZNF277Q9NRM2 450 aaPredicted RBP16.73■□□□□ 0.27
SCLT1-208ENST00000506368 KCNK4Q9NYG8 393 aa16.73■□□□□ 0.27
SCLT1-208ENST00000506368 DCTN4Q9UJW0 460 aa16.73■□□□□ 0.27
SCLT1-208ENST00000506368 UFL1O94874 794 aa16.72■□□□□ 0.27
SCLT1-208ENST00000506368 SERPINB3P29508 390 aa16.72■□□□□ 0.27
SCLT1-208ENST00000506368 CDC16Q13042 620 aa16.72■□□□□ 0.27
SCLT1-208ENST00000506368 MED21Q13503 144 aa16.72■□□□□ 0.27
SCLT1-208ENST00000506368 GSTA5Q7RTV2 222 aa16.72■□□□□ 0.27
SCLT1-208ENST00000506368 LRRC6Q86X45 466 aa16.72■□□□□ 0.27
SCLT1-208ENST00000506368 SYCP3Q8IZU3 236 aa16.72■□□□□ 0.27
SCLT1-208ENST00000506368 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.72■□□□□ 0.27
SCLT1-208ENST00000506368 SLC5A5Q92911 643 aa16.72■□□□□ 0.27
SCLT1-208ENST00000506368 FAM161BQ96MY7 647 aa16.72■□□□□ 0.27
SCLT1-208ENST00000506368 DHRS4Q9BTZ2 278 aa16.72■□□□□ 0.27
SCLT1-208ENST00000506368 TMEM120AQ9BXJ8 343 aa16.72■□□□□ 0.27
SCLT1-208ENST00000506368 VPS37BQ9H9H4 285 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms