RNA–Protein interactions for RNA: ENST00000505957.1

CPNE4-206, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-206ENST00000505957 HOXD13P35453 343 aa11.61□□□□□ -0.55
CPNE4-206ENST00000505957 CASP5P51878 434 aa11.61□□□□□ -0.55
CPNE4-206ENST00000505957 RAD51AP2Q09MP3 1159 aa11.61□□□□□ -0.55
CPNE4-206ENST00000505957 LRMPQ12912 555 aa11.61□□□□□ -0.55
CPNE4-206ENST00000505957 ELAVL2Q12926 359 aaKnown RBP11.61□□□□□ -0.55
CPNE4-206ENST00000505957 TUSC3Q13454 348 aa11.61□□□□□ -0.55
CPNE4-206ENST00000505957 CAPSQ13938 189 aa11.61□□□□□ -0.55
CPNE4-206ENST00000505957 ARID5BQ14865 1188 aa11.61□□□□□ -0.55
CPNE4-206ENST00000505957 MIIPQ5JXC2 388 aa11.61□□□□□ -0.55
CPNE4-206ENST00000505957 PPM1LQ5SGD2 360 aa11.61□□□□□ -0.55
CPNE4-206ENST00000505957 PRSS55Q6UWB4 352 aaPredicted RBP11.61□□□□□ -0.55
CPNE4-206ENST00000505957 CNGA4Q8IV77 575 aa11.61□□□□□ -0.55
CPNE4-206ENST00000505957 MYCT1Q8N699 235 aa11.61□□□□□ -0.55
CPNE4-206ENST00000505957 ZBTB44Q8NCP5 570 aa11.61□□□□□ -0.55
CPNE4-206ENST00000505957 MCPH1Q8NEM0 835 aa11.61□□□□□ -0.55
CPNE4-206ENST00000505957 ASAP3Q8TDY4 903 aa11.61□□□□□ -0.55
CPNE4-206ENST00000505957 ATRIPQ8WXE1 791 aa11.61□□□□□ -0.55
CPNE4-206ENST00000505957 NELL1Q92832 810 aa11.61□□□□□ -0.55
CPNE4-206ENST00000505957 CLDN23Q96B33 292 aa11.61□□□□□ -0.55
CPNE4-206ENST00000505957 PRIMPOLQ96LW4 560 aa11.61□□□□□ -0.55
CPNE4-206ENST00000505957 CCDC43Q96MW1 224 aaKnown RBP11.61□□□□□ -0.55
CPNE4-206ENST00000505957 PANX2Q96RD6 677 aa11.61□□□□□ -0.55
CPNE4-206ENST00000505957 MKNK1Q9BUB5 465 aa11.61□□□□□ -0.55
CPNE4-206ENST00000505957 NUP58Q9BVL2 599 aa11.61□□□□□ -0.55
CPNE4-206ENST00000505957 NAA15Q9BXJ9 866 aaKnown RBP11.61□□□□□ -0.55
CPNE4-206ENST00000505957 LTB4R2Q9NPC1 389 aa11.61□□□□□ -0.55
CPNE4-206ENST00000505957 SPATA6Q9NWH7 488 aaPredicted RBP11.61□□□□□ -0.55
CPNE4-206ENST00000505957 PARP2Q9UGN5 583 aa11.61□□□□□ -0.55
CPNE4-206ENST00000505957 KCNG1Q9UIX4 513 aa11.61□□□□□ -0.55
CPNE4-206ENST00000505957 FAM170BA6NMN3 283 aa11.6□□□□□ -0.55
CPNE4-206ENST00000505957 PRR5-ARHGAP8B1AHC4 643 aa11.6□□□□□ -0.55
CPNE4-206ENST00000505957 AKR1B15C9JRZ8 316 aaPredicted RBP11.6□□□□□ -0.55
CPNE4-206ENST00000505957 CETN3O15182 167 aa11.6□□□□□ -0.55
CPNE4-206ENST00000505957 NCAM2O15394 837 aa11.6□□□□□ -0.55
CPNE4-206ENST00000505957 B4GALT5O43286 388 aa11.6□□□□□ -0.55
CPNE4-206ENST00000505957 STX10O60499 249 aa11.6□□□□□ -0.55
CPNE4-206ENST00000505957 LILRB5O75023 590 aa11.6□□□□□ -0.55
CPNE4-206ENST00000505957 MFAP3LO75121 409 aa11.6□□□□□ -0.55
CPNE4-206ENST00000505957 GCNT3O95395 438 aa11.6□□□□□ -0.55
CPNE4-206ENST00000505957 NPTXRO95502 500 aa11.6□□□□□ -0.55
CPNE4-206ENST00000505957 TPM1P09493 284 aa11.6□□□□□ -0.55
CPNE4-206ENST00000505957 SKILP12757 684 aa11.6□□□□□ -0.55
CPNE4-206ENST00000505957 GLRA2P23416 452 aa11.6□□□□□ -0.55
CPNE4-206ENST00000505957 RPL13P26373 211 aaKnown RBP11.6□□□□□ -0.55
CPNE4-206ENST00000505957 MTIF2P46199 727 aaKnown RBP11.6□□□□□ -0.55
CPNE4-206ENST00000505957 RPS9P46781 194 aaKnown RBP11.6□□□□□ -0.55
CPNE4-206ENST00000505957 NCKAP1LP55160 1127 aa11.6□□□□□ -0.55
CPNE4-206ENST00000505957 NTHL1P78549 312 aa11.6□□□□□ -0.55
CPNE4-206ENST00000505957 ARHGAP8P85298 464 aa11.6□□□□□ -0.55
CPNE4-206ENST00000505957 UBXN1Q04323 297 aa11.6□□□□□ -0.55
CPNE4-206ENST00000505957 CSTF1Q05048 431 aaKnown RBP11.6□□□□□ -0.55
CPNE4-206ENST00000505957 PSMD5Q16401 504 aa11.6□□□□□ -0.55
CPNE4-206ENST00000505957 VWA3BQ502W6 1294 aa11.6□□□□□ -0.55
CPNE4-206ENST00000505957 FAM171A1Q5VUB5 890 aa11.6□□□□□ -0.55
CPNE4-206ENST00000505957 SLC9A9Q8IVB4 645 aa11.6□□□□□ -0.55
CPNE4-206ENST00000505957 TRIM59Q8IWR1 403 aa11.6□□□□□ -0.55
CPNE4-206ENST00000505957 C12orf56Q8IXR9 622 aa11.6□□□□□ -0.55
CPNE4-206ENST00000505957 TC2NQ8N9U0 490 aa11.6□□□□□ -0.55
CPNE4-206ENST00000505957 ST13P5Q8NFI4 369 aaPredicted RBP11.6□□□□□ -0.55
CPNE4-206ENST00000505957 SPIRE2Q8WWL2 714 aa11.6□□□□□ -0.55
CPNE4-206ENST00000505957 KIFAP3Q92845 792 aa11.6□□□□□ -0.55
CPNE4-206ENST00000505957 SECISBP2LQ93073 1101 aaKnown RBP11.6□□□□□ -0.55
CPNE4-206ENST00000505957 PAAF1Q9BRP4 392 aa11.6□□□□□ -0.55
CPNE4-206ENST00000505957 VPS16Q9H269 839 aa11.6□□□□□ -0.55
CPNE4-206ENST00000505957 EPC1Q9H2F5 836 aa11.6□□□□□ -0.55
CPNE4-206ENST00000505957 ZHX3Q9H4I2 956 aa11.6□□□□□ -0.55
CPNE4-206ENST00000505957 ZSCAN32Q9NX65 697 aa11.6□□□□□ -0.55
CPNE4-206ENST00000505957 KLK14Q9P0G3 267 aa11.6□□□□□ -0.55
CPNE4-206ENST00000505957 TBC1D7Q9P0N9 293 aa11.6□□□□□ -0.55
CPNE4-206ENST00000505957 NCDNQ9UBB6 729 aa11.6□□□□□ -0.55
CPNE4-206ENST00000505957 MTF2Q9Y483 593 aaPredicted RBP11.6□□□□□ -0.55
CPNE4-206ENST00000505957 ARID2Q68CP9 1835 aa11.6□□□□□ -0.55
CPNE4-206ENST00000505957 DMXL1Q9Y485 3027 aa11.6□□□□□ -0.55
CPNE4-206ENST00000505957 ARHGAP6O43182 974 aa11.59□□□□□ -0.55
CPNE4-206ENST00000505957 USO1O60763 962 aaKnown RBP11.59□□□□□ -0.55
CPNE4-206ENST00000505957 KIF4AO95239 1232 aa11.59□□□□□ -0.55
CPNE4-206ENST00000505957 GYPCP04921 128 aa11.59□□□□□ -0.55
CPNE4-206ENST00000505957 THP07101 528 aa11.59□□□□□ -0.55
CPNE4-206ENST00000505957 GTF2BQ00403 316 aa11.59□□□□□ -0.55
CPNE4-206ENST00000505957 RAB33AQ14088 237 aa11.59□□□□□ -0.55
CPNE4-206ENST00000505957 NOLC1Q14978 699 aaKnown RBP eCLIP11.59□□□□□ -0.55
CPNE4-206ENST00000505957 UBXN2BQ14CS0 331 aa11.59□□□□□ -0.55
CPNE4-206ENST00000505957 FAM187BQ17R55 369 aa11.59□□□□□ -0.55
CPNE4-206ENST00000505957 ZBTB41Q5SVQ8 909 aa11.59□□□□□ -0.55
CPNE4-206ENST00000505957 FKBP15Q5T1M5 1219 aa11.59□□□□□ -0.55
CPNE4-206ENST00000505957 TMEM139Q8IV31 216 aa11.59□□□□□ -0.55
CPNE4-206ENST00000505957 NELFCDQ8IXH7 590 aa11.59□□□□□ -0.55
CPNE4-206ENST00000505957 ITFG1Q8TB96 612 aa11.59□□□□□ -0.55
CPNE4-206ENST00000505957 RABGGTAQ92696 567 aa11.59□□□□□ -0.55
CPNE4-206ENST00000505957 NTPCRQ9BSD7 190 aaKnown RBP11.59□□□□□ -0.55
CPNE4-206ENST00000505957 FAM126AQ9BYI3 521 aaPredicted RBP11.59□□□□□ -0.55
CPNE4-206ENST00000505957 EDEM3Q9BZQ6 932 aa11.59□□□□□ -0.55
CPNE4-206ENST00000505957 TTYH3Q9C0H2 523 aa11.59□□□□□ -0.55
CPNE4-206ENST00000505957 TMEM206Q9H813 350 aa11.59□□□□□ -0.55
CPNE4-206ENST00000505957 METTL14Q9HCE5 456 aaKnown RBP11.59□□□□□ -0.55
CPNE4-206ENST00000505957 PRMT7Q9NVM4 692 aaPredicted RBP11.59□□□□□ -0.55
CPNE4-206ENST00000505957 DMAC2Q9NW81 257 aa11.59□□□□□ -0.55
CPNE4-206ENST00000505957 GDE1Q9NZC3 331 aa11.59□□□□□ -0.55
CPNE4-206ENST00000505957 CACNA1BQ00975 2339 aa11.59□□□□□ -0.55
CPNE4-206ENST00000505957 TPRP12270 2363 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms