RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 PATE3B3GLJ2 98 aa7.75□□□□□ -1.17
VCAN-206ENST00000505615 SHISA8B8ZZ34 492 aa7.75□□□□□ -1.17
VCAN-206ENST00000505615 PTGESO14684 152 aa7.75□□□□□ -1.17
VCAN-206ENST00000505615 DCLK1O15075 740 aa7.75□□□□□ -1.17
VCAN-206ENST00000505615 CHADO15335 359 aa7.75□□□□□ -1.17
VCAN-206ENST00000505615 ERLIN2O94905 339 aa7.75□□□□□ -1.17
VCAN-206ENST00000505615 PTPN2P17706 415 aa7.75□□□□□ -1.17
VCAN-206ENST00000505615 ARF4P18085 180 aaPredicted RBP7.75□□□□□ -1.17
VCAN-206ENST00000505615 AXLP30530 894 aa7.75□□□□□ -1.17
VCAN-206ENST00000505615 MAP2K3P46734 347 aa7.75□□□□□ -1.17
VCAN-206ENST00000505615 SCTRP47872 440 aa7.75□□□□□ -1.17
VCAN-206ENST00000505615 KPNA1P52294 538 aaPredicted RBP7.75□□□□□ -1.17
VCAN-206ENST00000505615 FGD1P98174 961 aa7.75□□□□□ -1.17
VCAN-206ENST00000505615 CREB5Q02930 508 aa7.75□□□□□ -1.17
VCAN-206ENST00000505615 SPIRE1Q08AE8 756 aa7.75□□□□□ -1.17
VCAN-206ENST00000505615 FCHO2Q0JRZ9 810 aa7.75□□□□□ -1.17
VCAN-206ENST00000505615 ELAVL2Q12926 359 aaKnown RBP7.75□□□□□ -1.17
VCAN-206ENST00000505615 MCM6Q14566 821 aa7.75□□□□□ -1.17
VCAN-206ENST00000505615 LRCH2Q5VUJ6 765 aa7.75□□□□□ -1.17
VCAN-206ENST00000505615 NOTUMQ6P988 496 aa7.75□□□□□ -1.17
VCAN-206ENST00000505615 PDXDC1Q6P996 788 aa7.75□□□□□ -1.17
VCAN-206ENST00000505615 MIER3Q7Z3K6 550 aa7.75□□□□□ -1.17
VCAN-206ENST00000505615 CYP2U1Q7Z449 544 aa7.75□□□□□ -1.17
VCAN-206ENST00000505615 SGMS1Q86VZ5 419 aa7.75□□□□□ -1.17
VCAN-206ENST00000505615 SYNPOQ8N3V7 929 aa7.75□□□□□ -1.17
VCAN-206ENST00000505615 RNF149Q8NC42 400 aa7.75□□□□□ -1.17
VCAN-206ENST00000505615 ZSCAN18Q8TBC5 510 aaPredicted RBP7.75□□□□□ -1.17
VCAN-206ENST00000505615 CSGALNACT1Q8TDX6 532 aa7.75□□□□□ -1.17
VCAN-206ENST00000505615 TMEM87BQ96K49 555 aa7.75□□□□□ -1.17
VCAN-206ENST00000505615 JPH2Q9BR39 696 aaPredicted RBP7.75□□□□□ -1.17
VCAN-206ENST00000505615 LRRC2Q9BYS8 371 aa7.75□□□□□ -1.17
VCAN-206ENST00000505615 CXCL16Q9H2A7 254 aa7.75□□□□□ -1.17
VCAN-206ENST00000505615 SNTG2Q9NY99 539 aa7.75□□□□□ -1.17
VCAN-206ENST00000505615 BACE2Q9Y5Z0 518 aa7.75□□□□□ -1.17
VCAN-206ENST00000505615 SLC12A7Q9Y666 1083 aa7.75□□□□□ -1.17
VCAN-206ENST00000505615 PCDH15Q96QU1 1955 aa7.75□□□□□ -1.17
VCAN-206ENST00000505615 SPAARA0A1B0GVQ0 90 aa7.74□□□□□ -1.17
VCAN-206ENST00000505615 ZNF197O14709 1029 aa7.74□□□□□ -1.17
VCAN-206ENST00000505615 B4GALT5O43286 388 aa7.74□□□□□ -1.17
VCAN-206ENST00000505615 C1QL1O75973 258 aa7.74□□□□□ -1.17
VCAN-206ENST00000505615 ABLIM3O94929 683 aa7.74□□□□□ -1.17
VCAN-206ENST00000505615 SEC24AO95486 1093 aa7.74□□□□□ -1.17
VCAN-206ENST00000505615 NPTXRO95502 500 aa7.74□□□□□ -1.17
VCAN-206ENST00000505615 LRG1P02750 347 aa7.74□□□□□ -1.17
VCAN-206ENST00000505615 F11P03951 625 aa7.74□□□□□ -1.17
VCAN-206ENST00000505615 GJA1P17302 382 aa7.74□□□□□ -1.17
VCAN-206ENST00000505615 COL8A1P27658 744 aa7.74□□□□□ -1.17
VCAN-206ENST00000505615 TKTP29401 623 aaKnown RBP7.74□□□□□ -1.17
VCAN-206ENST00000505615 EPHA5P54756 1037 aa7.74□□□□□ -1.17
VCAN-206ENST00000505615 PTENP60484 403 aa7.74□□□□□ -1.17
VCAN-206ENST00000505615 ROR1Q01973 937 aa7.74□□□□□ -1.17
VCAN-206ENST00000505615 MBTD1Q05BQ5 628 aa7.74□□□□□ -1.17
VCAN-206ENST00000505615 SCAPQ12770 1279 aa7.74□□□□□ -1.17
VCAN-206ENST00000505615 UBAP2LQ14157 1087 aaKnown RBP7.74□□□□□ -1.17
VCAN-206ENST00000505615 SLC8B1Q6J4K2 584 aa7.74□□□□□ -1.17
VCAN-206ENST00000505615 APOA5Q6Q788 366 aa7.74□□□□□ -1.17
VCAN-206ENST00000505615 C1orf229Q6ZS94 237 aaPredicted RBP7.74□□□□□ -1.17
VCAN-206ENST00000505615 PDZD4Q76G19 769 aaPredicted RBP7.74□□□□□ -1.17
VCAN-206ENST00000505615 PIP4P1Q86T03 277 aa7.74□□□□□ -1.17
VCAN-206ENST00000505615 FERMT3Q86UX7 667 aa7.74□□□□□ -1.17
VCAN-206ENST00000505615 CDR2LQ86X02 465 aaPredicted RBP7.74□□□□□ -1.17
VCAN-206ENST00000505615 RALGPS2Q86X27 583 aaPredicted RBP7.74□□□□□ -1.17
VCAN-206ENST00000505615 SMC5Q8IY18 1101 aa7.74□□□□□ -1.17
VCAN-206ENST00000505615 REXO1Q8N1G1 1221 aaKnown RBP7.74□□□□□ -1.17
VCAN-206ENST00000505615 GLIS3Q8NEA6 775 aa7.74□□□□□ -1.17
VCAN-206ENST00000505615 SHKBP1Q8TBC3 707 aa7.74□□□□□ -1.17
VCAN-206ENST00000505615 PCMTD1Q96MG8 357 aaPredicted RBP7.74□□□□□ -1.17
VCAN-206ENST00000505615 LRRC3BQ96PB8 259 aa7.74□□□□□ -1.17
VCAN-206ENST00000505615 ZMYND12Q9H0C1 365 aa7.74□□□□□ -1.17
VCAN-206ENST00000505615 WRAP73Q9P2S5 460 aaPredicted RBP7.74□□□□□ -1.17
VCAN-206ENST00000505615 PCDHB9Q9Y5E1 797 aa7.74□□□□□ -1.17
VCAN-206ENST00000505615 INSL5Q9Y5Q6 135 aa7.74□□□□□ -1.17
VCAN-206ENST00000505615 MGAQ8IWI9 3026 aa7.73□□□□□ -1.17
VCAN-206ENST00000505615 OBSL1O75147 1896 aa7.73□□□□□ -1.17
VCAN-206ENST00000505615 TMEM189-UBE2V1I3L0A0 370 aa7.73□□□□□ -1.17
VCAN-206ENST00000505615 EML1O00423 815 aa7.73□□□□□ -1.17
VCAN-206ENST00000505615 MEFVO15553 781 aaPredicted RBP7.73□□□□□ -1.17
VCAN-206ENST00000505615 PRB1P04280 392 aa7.73□□□□□ -1.17
VCAN-206ENST00000505615 HOXB4P17483 251 aaPredicted RBP7.73□□□□□ -1.17
VCAN-206ENST00000505615 MCM5P33992 734 aa7.73□□□□□ -1.17
VCAN-206ENST00000505615 PSMC5P62195 406 aa7.73□□□□□ -1.17
VCAN-206ENST00000505615 IRX4P78413 519 aa7.73□□□□□ -1.17
VCAN-206ENST00000505615 EMC2Q15006 297 aa7.73□□□□□ -1.17
VCAN-206ENST00000505615 PCBP1Q15365 356 aaKnown RBP eCLIP7.73□□□□□ -1.17
VCAN-206ENST00000505615 TEAD2Q15562 447 aa7.73□□□□□ -1.17
VCAN-206ENST00000505615 ELF2Q15723 593 aa7.73□□□□□ -1.17
VCAN-206ENST00000505615 PFKFB3Q16875 520 aaPredicted RBP7.73□□□□□ -1.17
VCAN-206ENST00000505615 UAP1L1Q3KQV9 507 aa7.73□□□□□ -1.17
VCAN-206ENST00000505615 PMS2CLQ68D20 193 aa7.73□□□□□ -1.17
VCAN-206ENST00000505615 FSTL4Q6MZW2 842 aa7.73□□□□□ -1.17
VCAN-206ENST00000505615 TAS1R3Q7RTX0 852 aa7.73□□□□□ -1.17
VCAN-206ENST00000505615 RAB44Q7Z6P3 723 aaPredicted RBP7.73□□□□□ -1.17
VCAN-206ENST00000505615 TCEAL8Q8IYN2 117 aa7.73□□□□□ -1.17
VCAN-206ENST00000505615 HACE1Q8IYU2 909 aa7.73□□□□□ -1.17
VCAN-206ENST00000505615 ZNF461Q8TAF7 563 aa7.73□□□□□ -1.17
VCAN-206ENST00000505615 TTC8Q8TAM2 541 aa7.73□□□□□ -1.17
VCAN-206ENST00000505615 ETNPPLQ8TBG4 499 aa7.73□□□□□ -1.17
VCAN-206ENST00000505615 SLC7A3Q8WY07 619 aa7.73□□□□□ -1.17
VCAN-206ENST00000505615 CHFRQ96EP1 664 aa7.73□□□□□ -1.17
VCAN-206ENST00000505615 ZFYVE19Q96K21 471 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms