RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 USP15Q9Y4E8 981 aaPredicted RBP10.58□□□□□ -0.72
NR1I3-220ENST00000505005 ATP8B3O60423 1300 aa10.58□□□□□ -0.72
NR1I3-220ENST00000505005 CLUHO75153 1309 aa10.58□□□□□ -0.72
NR1I3-220ENST00000505005 TNFRSF10AO00220 468 aa10.57□□□□□ -0.72
NR1I3-220ENST00000505005 PMM2O15305 246 aa10.57□□□□□ -0.72
NR1I3-220ENST00000505005 CLSTN1O94985 981 aa10.57□□□□□ -0.72
NR1I3-220ENST00000505005 C8AP07357 584 aa10.57□□□□□ -0.72
NR1I3-220ENST00000505005 EPCAMP16422 314 aa10.57□□□□□ -0.72
NR1I3-220ENST00000505005 ERCC5P28715 1186 aaPredicted RBP10.57□□□□□ -0.72
NR1I3-220ENST00000505005 SSTR3P32745 418 aaPredicted RBP10.57□□□□□ -0.72
NR1I3-220ENST00000505005 RPL10AP62906 217 aaKnown RBP10.57□□□□□ -0.72
NR1I3-220ENST00000505005 ROR1Q01973 937 aa10.57□□□□□ -0.72
NR1I3-220ENST00000505005 TFF2Q03403 129 aa10.57□□□□□ -0.72
NR1I3-220ENST00000505005 TAF12Q16514 161 aa10.57□□□□□ -0.72
NR1I3-220ENST00000505005 WDR72Q3MJ13 1102 aa10.57□□□□□ -0.72
NR1I3-220ENST00000505005 ZACNQ401N2 412 aa10.57□□□□□ -0.72
NR1I3-220ENST00000505005 ZCWPW2Q504Y3 356 aa10.57□□□□□ -0.72
NR1I3-220ENST00000505005 SYCE2Q6PIF2 218 aa10.57□□□□□ -0.72
NR1I3-220ENST00000505005 PRSS55Q6UWB4 352 aaPredicted RBP10.57□□□□□ -0.72
NR1I3-220ENST00000505005 CD300LGQ6UXG3 332 aa10.57□□□□□ -0.72
NR1I3-220ENST00000505005 ZDHHC14Q8IZN3 488 aa10.57□□□□□ -0.72
NR1I3-220ENST00000505005 C3orf58Q8NDZ4 430 aa10.57□□□□□ -0.72
NR1I3-220ENST00000505005 GLIS3Q8NEA6 775 aa10.57□□□□□ -0.72
NR1I3-220ENST00000505005 SMG7Q92540 1137 aaKnown RBP10.57□□□□□ -0.72
NR1I3-220ENST00000505005 RABGGTAQ92696 567 aa10.57□□□□□ -0.72
NR1I3-220ENST00000505005 E2F7Q96AV8 911 aa10.57□□□□□ -0.72
NR1I3-220ENST00000505005 MMS19Q96T76 1030 aa10.57□□□□□ -0.72
NR1I3-220ENST00000505005 SNX25Q9H3E2 840 aa10.57□□□□□ -0.72
NR1I3-220ENST00000505005 CLSTN2Q9H4D0 955 aa10.57□□□□□ -0.72
NR1I3-220ENST00000505005 CYP3A43Q9HB55 503 aa10.57□□□□□ -0.72
NR1I3-220ENST00000505005 CYP4F11Q9HBI6 524 aa10.57□□□□□ -0.72
NR1I3-220ENST00000505005 TMEM8AQ9HCN3 771 aa10.57□□□□□ -0.72
NR1I3-220ENST00000505005 WDR6Q9NNW5 1121 aaKnown RBP10.57□□□□□ -0.72
NR1I3-220ENST00000505005 IGSF9Q9P2J2 1179 aa10.57□□□□□ -0.72
NR1I3-220ENST00000505005 RWDD2AQ9UIY3 292 aa10.57□□□□□ -0.72
NR1I3-220ENST00000505005 MAN1B1Q9UKM7 699 aa10.57□□□□□ -0.72
NR1I3-220ENST00000505005 CDH9Q9ULB4 789 aa10.57□□□□□ -0.72
NR1I3-220ENST00000505005 SNX9Q9Y5X1 595 aa10.57□□□□□ -0.72
NR1I3-220ENST00000505005 LINC01565O15544 149 aa10.56□□□□□ -0.72
NR1I3-220ENST00000505005 GADD45BO75293 160 aaPredicted RBP10.56□□□□□ -0.72
NR1I3-220ENST00000505005 C4BPAP04003 597 aaKnown RBP10.56□□□□□ -0.72
NR1I3-220ENST00000505005 TPM2P07951 284 aa10.56□□□□□ -0.72
NR1I3-220ENST00000505005 GTF2F1P35269 517 aaKnown RBP eCLIP10.56□□□□□ -0.72
NR1I3-220ENST00000505005 GNL1P36915 607 aaPredicted RBP10.56□□□□□ -0.72
NR1I3-220ENST00000505005 NCOA4Q13772 614 aa10.56□□□□□ -0.72
NR1I3-220ENST00000505005 NFKBIBQ15653 356 aa10.56□□□□□ -0.72
NR1I3-220ENST00000505005 SKOR2Q2VWA4 1001 aaPredicted RBP10.56□□□□□ -0.72
NR1I3-220ENST00000505005 ZNF699Q32M78 642 aa10.56□□□□□ -0.72
NR1I3-220ENST00000505005 CCDC40Q4G0X9 1142 aa10.56□□□□□ -0.72
NR1I3-220ENST00000505005 PABPC1LQ4VXU2 614 aaKnown RBP10.56□□□□□ -0.72
NR1I3-220ENST00000505005 RARS2Q5T160 578 aaKnown RBP10.56□□□□□ -0.72
NR1I3-220ENST00000505005 SASS6Q6UVJ0 657 aa10.56□□□□□ -0.72
NR1I3-220ENST00000505005 VSTM1Q6UX27 236 aa10.56□□□□□ -0.72
NR1I3-220ENST00000505005 UNC93AQ86WB7 457 aa10.56□□□□□ -0.72
NR1I3-220ENST00000505005 ZC3H3Q8IXZ2 948 aaKnown RBP10.56□□□□□ -0.72
NR1I3-220ENST00000505005 ADGRF2Q8IZF7 708 aa10.56□□□□□ -0.72
NR1I3-220ENST00000505005 TDRD5Q8NAT2 981 aaKnown RBP10.56□□□□□ -0.72
NR1I3-220ENST00000505005 CHAMP1Q96JM3 812 aa10.56□□□□□ -0.72
NR1I3-220ENST00000505005 GCNAQ96QF7 691 aa10.56□□□□□ -0.72
NR1I3-220ENST00000505005 C1QTNF1Q9BXJ1 281 aa10.56□□□□□ -0.72
NR1I3-220ENST00000505005 NAT10Q9H0A0 1025 aaKnown RBP10.56□□□□□ -0.72
NR1I3-220ENST00000505005 GDE1Q9NZC3 331 aa10.56□□□□□ -0.72
NR1I3-220ENST00000505005 UXTQ9UBK9 157 aaPredicted RBP10.56□□□□□ -0.72
NR1I3-220ENST00000505005 MAPK8IP1Q9UQF2 711 aa10.56□□□□□ -0.72
NR1I3-220ENST00000505005 PCDHB5Q9Y5E4 795 aa10.56□□□□□ -0.72
NR1I3-220ENST00000505005 BRWD1Q9NSI6 2320 aa10.56□□□□□ -0.72
NR1I3-220ENST00000505005 ATG2AQ2TAZ0 1938 aa10.55□□□□□ -0.72
NR1I3-220ENST00000505005 C19orf67A6NJJ6 358 aa10.55□□□□□ -0.72
NR1I3-220ENST00000505005 LRRIQ3A6PVS8 624 aaPredicted RBP10.55□□□□□ -0.72
NR1I3-220ENST00000505005 GABRDO14764 452 aa10.55□□□□□ -0.72
NR1I3-220ENST00000505005 MEFVO15553 781 aaPredicted RBP10.55□□□□□ -0.72
NR1I3-220ENST00000505005 AKAP3O75969 853 aa10.55□□□□□ -0.72
NR1I3-220ENST00000505005 WARSP23381 471 aaKnown RBP10.55□□□□□ -0.72
NR1I3-220ENST00000505005 TBXAS1P24557 533 aaPredicted RBP10.55□□□□□ -0.72
NR1I3-220ENST00000505005 PPP3CCP48454 512 aa10.55□□□□□ -0.72
NR1I3-220ENST00000505005 PDE6CP51160 858 aa10.55□□□□□ -0.72
NR1I3-220ENST00000505005 NUBP1P53384 320 aa10.55□□□□□ -0.72
NR1I3-220ENST00000505005 MARSP56192 900 aaKnown RBP10.55□□□□□ -0.72
NR1I3-220ENST00000505005 ARPP19P56211 112 aa10.55□□□□□ -0.72
NR1I3-220ENST00000505005 DLX2Q07687 328 aaPredicted RBP10.55□□□□□ -0.72
NR1I3-220ENST00000505005 ADCY1Q08828 1119 aa10.55□□□□□ -0.72
NR1I3-220ENST00000505005 TCERG1LQ5VWI1 586 aa10.55□□□□□ -0.72
NR1I3-220ENST00000505005 ANKRD40Q6AI12 368 aa10.55□□□□□ -0.72
NR1I3-220ENST00000505005 TMC5Q6UXY8 1006 aa10.55□□□□□ -0.72
NR1I3-220ENST00000505005 MTSS1LQ765P7 747 aa10.55□□□□□ -0.72
NR1I3-220ENST00000505005 SV2AQ7L0J3 742 aa10.55□□□□□ -0.72
NR1I3-220ENST00000505005 UBALD2Q8IYN6 164 aa10.55□□□□□ -0.72
NR1I3-220ENST00000505005 FBXL13Q8NEE6 735 aa10.55□□□□□ -0.72
NR1I3-220ENST00000505005 ANKRD20A12PQ8NF67 263 aa10.55□□□□□ -0.72
NR1I3-220ENST00000505005 SLC7A14Q8TBB6 771 aa10.55□□□□□ -0.72
NR1I3-220ENST00000505005 NELFBQ8WX92 580 aa10.55□□□□□ -0.72
NR1I3-220ENST00000505005 BORCS6Q96GS4 357 aa10.55□□□□□ -0.72
NR1I3-220ENST00000505005 ZCWPW1Q9H0M4 648 aa10.55□□□□□ -0.72
NR1I3-220ENST00000505005 CXCL16Q9H2A7 254 aa10.55□□□□□ -0.72
NR1I3-220ENST00000505005 PRDM6Q9NQX0 595 aa10.55□□□□□ -0.72
NR1I3-220ENST00000505005 LMBRD1Q9NUN5 540 aa10.55□□□□□ -0.72
NR1I3-220ENST00000505005 DDX43Q9NXZ2 648 aaKnown RBP10.55□□□□□ -0.72
NR1I3-220ENST00000505005 MAGEC2Q9UBF1 373 aaPredicted RBP10.55□□□□□ -0.72
NR1I3-220ENST00000505005 PCDHGC5Q9Y5F6 944 aa10.55□□□□□ -0.72
NR1I3-220ENST00000505005 CDH23Q9H251 3354 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms