RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 TNNC2P02585 160 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 FAM163BP0C2L3 166 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 KRT13P13646 458 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 TYMPP19971 482 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 PAX3P23760 479 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 PPM1AP35813 382 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 PNPLA4P41247 253 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 CDH8P55286 799 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 RNASELQ05823 741 aaKnown RBP5.3□□□□□ -1.56
LMNB1-208ENST00000504788 ARID5BQ14865 1188 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 SGSM1Q2NKQ1 1148 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 WDR72Q3MJ13 1102 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 VARS2Q5ST30 1063 aaKnown RBP5.3□□□□□ -1.56
LMNB1-208ENST00000504788 KLHDC7AQ5VTJ3 777 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 TCERG1LQ5VWI1 586 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 WSCD1Q658N2 575 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 E4F1Q66K89 784 aaPredicted RBP5.3□□□□□ -1.56
LMNB1-208ENST00000504788 GJB7Q6PEY0 223 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 PRSS55Q6UWB4 352 aaPredicted RBP5.3□□□□□ -1.56
LMNB1-208ENST00000504788 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.3□□□□□ -1.56
LMNB1-208ENST00000504788 ADGRD2Q7Z7M1 963 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 FAM114A1Q8IWE2 563 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 TOP6BLQ8N6T0 577 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 PDCD7Q8N8D1 485 aaKnown RBP5.3□□□□□ -1.56
LMNB1-208ENST00000504788 MRPL43Q8N983 215 aaKnown RBP5.3□□□□□ -1.56
LMNB1-208ENST00000504788 VN1R2Q8NFZ6 395 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 SPATA18Q8TC71 538 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 GDPD5Q8WTR4 605 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 POF1BQ8WVV4 589 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 AUTS2Q8WXX7 1259 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 SHC3Q92529 594 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 BAP1Q92560 729 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 TMEM209Q96SK2 561 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 CRACR2AQ9BSW2 395 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 SYT11Q9BT88 431 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 C11orf84Q9BUA3 381 aaPredicted RBP5.3□□□□□ -1.56
LMNB1-208ENST00000504788 XPO4Q9C0E2 1151 aaKnown RBP5.3□□□□□ -1.56
LMNB1-208ENST00000504788 CRISPLD1Q9H336 500 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 SMYD3Q9H7B4 428 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 SLC28A3Q9HAS3 691 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 GCNT4Q9P109 453 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 MTRRQ9UBK8 725 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 MTUS1Q9ULD2 1270 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 PCDHB8Q9UN66 801 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 STXBP5LQ9Y2K9 1186 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 RWDD3Q9Y3V2 267 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 TIMM13Q9Y5L4 95 aaPredicted RBP5.3□□□□□ -1.56
LMNB1-208ENST00000504788 SNX9Q9Y5X1 595 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 MTCH2Q9Y6C9 303 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 A0A0C4DFX4 3053 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 SF3B1O75533 1304 aaKnown RBP eCLIP5.3□□□□□ -1.563e-6■■■■■ 73.4
LMNB1-208ENST00000504788 DOCK8Q8NF50 2099 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 CARNS1A5YM72 827 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 GLP2RO95838 553 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 CNPP09543 421 aaKnown RBP5.3□□□□□ -1.56
LMNB1-208ENST00000504788 PRKCSHP14314 528 aaPredicted RBP5.3□□□□□ -1.56
LMNB1-208ENST00000504788 UCHL3P15374 230 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 WARSP23381 471 aaKnown RBP5.3□□□□□ -1.56
LMNB1-208ENST00000504788 CTNNB1P35222 781 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 MTIF2P46199 727 aaKnown RBP5.3□□□□□ -1.56
LMNB1-208ENST00000504788 RAP1GAPP47736 663 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 RAD23BP54727 409 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 RBM10P98175 930 aaKnown RBP5.3□□□□□ -1.56
LMNB1-208ENST00000504788 MYL7Q01449 175 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 TBX2Q13207 712 aaPredicted RBP5.3□□□□□ -1.56
LMNB1-208ENST00000504788 GPM6BQ13491 265 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 CUL2Q13617 745 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 SYCP1Q15431 976 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 EXOC3L4Q17RC7 722 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 CTC1Q2NKJ3 1217 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 SV2CQ496J9 727 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 FIGNQ5HY92 759 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 FAM171A1Q5VUB5 890 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 SMYD5Q6GMV2 418 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 FAM171BQ6P995 826 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 Q7L0L9 218 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 USP37Q86T82 979 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 VPS52Q8N1B4 723 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 CRYBG2Q8N1P7 616 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 TMEM169Q96HH4 297 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 ZNF560Q96MR9 790 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 LPIN3Q9BQK8 851 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 COLEC11Q9BWP8 271 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 ELOVL4Q9GZR5 314 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 NIF3L1Q9GZT8 377 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 INTS2Q9H0H0 1204 aaKnown RBP5.3□□□□□ -1.56
LMNB1-208ENST00000504788 DPEP3Q9H4B8 488 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 FAM124BQ9H5Z6 455 aaPredicted RBP5.3□□□□□ -1.56
LMNB1-208ENST00000504788 MMRN2Q9H8L6 949 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 ACP6Q9NPH0 428 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 CRTAC1Q9NQ79 661 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 TMLHEQ9NVH6 421 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 CEP72Q9P209 647 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 FNIP2Q9P278 1114 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 APEX2Q9UBZ4 518 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 MSRAQ9UJ68 235 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 PCDHB12Q9Y5F1 795 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 BACE2Q9Y5Z0 518 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 FHOD1Q9Y613 1164 aa5.3□□□□□ -1.56
LMNB1-208ENST00000504788 MYH10P35580 1976 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms