RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 NUBP1P53384 320 aa27.33■■□□□ 1.97
PVT1-201ENST00000504719 WSCD1Q658N2 575 aa27.33■■□□□ 1.97
PVT1-201ENST00000504719 PDZD4Q76G19 769 aaPredicted RBP27.33■■□□□ 1.97
PVT1-201ENST00000504719 HS6ST3Q8IZP7 471 aa27.33■■□□□ 1.97
PVT1-201ENST00000504719 GPR152Q8TDT2 470 aa27.33■■□□□ 1.97
PVT1-201ENST00000504719 ITGA11Q9UKX5 1188 aa27.33■■□□□ 1.97
PVT1-201ENST00000504719 KRBA1A5PL33 1030 aa27.32■■□□□ 1.96
PVT1-201ENST00000504719 KLRC4O43908 158 aa27.32■■□□□ 1.96
PVT1-201ENST00000504719 EPHA5P54756 1037 aa27.32■■□□□ 1.96
PVT1-201ENST00000504719 PTPN5P54829 565 aa27.32■■□□□ 1.96
PVT1-201ENST00000504719 TCF15Q12870 199 aa27.32■■□□□ 1.96
PVT1-201ENST00000504719 PLD1Q13393 1074 aa27.32■■□□□ 1.96
PVT1-201ENST00000504719 CYP4A22Q5TCH4 519 aa27.32■■□□□ 1.96
PVT1-201ENST00000504719 SCARA3Q6AZY7 606 aa27.32■■□□□ 1.96
PVT1-201ENST00000504719 CBWD2Q8IUF1 395 aa27.32■■□□□ 1.96
PVT1-201ENST00000504719 FMR1NBQ8N0W7 255 aaPredicted RBP27.32■■□□□ 1.96
PVT1-201ENST00000504719 THEM5Q8N1Q8 247 aa27.32■■□□□ 1.96
PVT1-201ENST00000504719 CSGALNACT2Q8N6G5 542 aa27.32■■□□□ 1.96
PVT1-201ENST00000504719 ATAD1Q8NBU5 361 aa27.32■■□□□ 1.96
PVT1-201ENST00000504719 FLCNQ8NFG4 579 aa27.32■■□□□ 1.96
PVT1-201ENST00000504719 FAM84AQ96KN4 292 aa27.32■■□□□ 1.96
PVT1-201ENST00000504719 ZCWPW1Q9H0M4 648 aa27.32■■□□□ 1.96
PVT1-201ENST00000504719 KIAA1586Q9HCI6 787 aa27.32■■□□□ 1.96
PVT1-201ENST00000504719 SLC39A2Q9NP94 309 aa27.32■■□□□ 1.96
PVT1-201ENST00000504719 AGPAT3Q9NRZ7 376 aa27.32■■□□□ 1.96
PVT1-201ENST00000504719 NRG2O14511 850 aaPredicted RBP27.31■■□□□ 1.96
PVT1-201ENST00000504719 TMEM191BP0C7N4 346 aa27.31■■□□□ 1.96
PVT1-201ENST00000504719 PRR29P0C7W0 189 aa27.31■■□□□ 1.96
PVT1-201ENST00000504719 SNRPFP62306 86 aaKnown RBP27.31■■□□□ 1.96
PVT1-201ENST00000504719 SURF1Q15526 300 aa27.31■■□□□ 1.96
PVT1-201ENST00000504719 BMT2Q1RMZ1 405 aa27.31■■□□□ 1.96
PVT1-201ENST00000504719 NELFCDQ8IXH7 590 aa27.31■■□□□ 1.96
PVT1-201ENST00000504719 LRRC52Q8N7C0 313 aa27.31■■□□□ 1.96
PVT1-201ENST00000504719 LEMD2Q8NC56 503 aa27.31■■□□□ 1.96
PVT1-201ENST00000504719 MTMR12Q9C0I1 747 aa27.31■■□□□ 1.96
PVT1-201ENST00000504719 DNAJC25Q9H1X3 360 aa27.31■■□□□ 1.96
PVT1-201ENST00000504719 ASAH2Q9NR71 780 aa27.31■■□□□ 1.96
PVT1-201ENST00000504719 EXOC1Q9NV70 894 aa27.31■■□□□ 1.96
PVT1-201ENST00000504719 HSFX1Q9UBD0 423 aa27.31■■□□□ 1.96
PVT1-201ENST00000504719 CA14Q9ULX7 337 aa27.31■■□□□ 1.96
PVT1-201ENST00000504719 SLC27A5Q9Y2P5 690 aa27.31■■□□□ 1.96
PVT1-201ENST00000504719 MOSPD3O75425 235 aa27.3■■□□□ 1.96
PVT1-201ENST00000504719 GPC5P78333 572 aa27.3■■□□□ 1.96
PVT1-201ENST00000504719 SNW1Q13573 536 aaKnown RBP27.3■■□□□ 1.96
PVT1-201ENST00000504719 KMT5BQ4FZB7 885 aa27.3■■□□□ 1.96
PVT1-201ENST00000504719 SLC39A12Q504Y0 691 aa27.3■■□□□ 1.96
PVT1-201ENST00000504719 LMBRD2Q68DH5 695 aaPredicted RBP27.3■■□□□ 1.96
PVT1-201ENST00000504719 ENGASEQ8NFI3 743 aa27.3■■□□□ 1.96
PVT1-201ENST00000504719 ANKRD36BP1Q96IX9 119 aa27.3■■□□□ 1.96
PVT1-201ENST00000504719 KXD1Q9BQD3 176 aa27.3■■□□□ 1.96
PVT1-201ENST00000504719 INTS13Q9NVM9 706 aa27.3■■□□□ 1.96
PVT1-201ENST00000504719 SIX4Q9UIU6 781 aa27.3■■□□□ 1.96
PVT1-201ENST00000504719 CLIC2O15247 247 aa27.29■■□□□ 1.96
PVT1-201ENST00000504719 AOC1P19801 751 aa27.29■■□□□ 1.96
PVT1-201ENST00000504719 ALDH1A3P47895 512 aa27.29■■□□□ 1.96
PVT1-201ENST00000504719 EPHB3P54753 998 aa27.29■■□□□ 1.96
PVT1-201ENST00000504719 RBP5P82980 135 aa27.29■■□□□ 1.96
PVT1-201ENST00000504719 FAM160A1Q05DH4 1040 aa27.29■■□□□ 1.96
PVT1-201ENST00000504719 TTC9BQ8N6N2 239 aa27.29■■□□□ 1.96
PVT1-201ENST00000504719 IPO9Q96P70 1041 aaKnown RBP27.29■■□□□ 1.96
PVT1-201ENST00000504719 LRRC3Q9BY71 257 aa27.29■■□□□ 1.96
PVT1-201ENST00000504719 PTPRJQ12913 1337 aa27.28■■□□□ 1.96
PVT1-201ENST00000504719 GALR2O43603 387 aaPredicted RBP27.28■■□□□ 1.96
PVT1-201ENST00000504719 PI15O43692 258 aa27.28■■□□□ 1.96
PVT1-201ENST00000504719 GADD45BO75293 160 aaPredicted RBP27.28■■□□□ 1.96
PVT1-201ENST00000504719 ECI2O75521 394 aa27.28■■□□□ 1.96
PVT1-201ENST00000504719 RPN1P04843 607 aaKnown RBP27.28■■□□□ 1.96
PVT1-201ENST00000504719 KRT19P08727 400 aa27.28■■□□□ 1.96
PVT1-201ENST00000504719 MYL4P12829 197 aa27.28■■□□□ 1.96
PVT1-201ENST00000504719 HOXD11P31277 338 aaPredicted RBP27.28■■□□□ 1.96
PVT1-201ENST00000504719 SMARCB1Q12824 385 aa27.28■■□□□ 1.96
PVT1-201ENST00000504719 DPYDQ12882 1025 aa27.28■■□□□ 1.96
PVT1-201ENST00000504719 BFSP1Q12934 665 aa27.28■■□□□ 1.96
PVT1-201ENST00000504719 LRRTM3Q86VH5 581 aa27.28■■□□□ 1.96
PVT1-201ENST00000504719 TMC8Q8IU68 726 aa27.28■■□□□ 1.96
PVT1-201ENST00000504719 OR5B17Q8NGF7 314 aa27.28■■□□□ 1.96
PVT1-201ENST00000504719 CCDC34Q96HJ3 373 aa27.28■■□□□ 1.96
PVT1-201ENST00000504719 GDAP2Q9NXN4 497 aa27.28■■□□□ 1.96
PVT1-201ENST00000504719 L1RE1Q9UN81 338 aa27.28■■□□□ 1.96
PVT1-201ENST00000504719 SNRNP35Q16560 246 aaKnown RBP27.27■■□□□ 1.96
PVT1-201ENST00000504719 KNOP1Q1ED39 458 aaKnown RBP27.27■■□□□ 1.96
PVT1-201ENST00000504719 TANGO2Q6ICL3 276 aa27.27■■□□□ 1.96
PVT1-201ENST00000504719 HS2ST1Q7LGA3 356 aa27.27■■□□□ 1.96
PVT1-201ENST00000504719 PDCL2Q8N4E4 241 aa27.27■■□□□ 1.96
PVT1-201ENST00000504719 XXYLT1Q8NBI6 393 aa27.27■■□□□ 1.96
PVT1-201ENST00000504719 RDH13Q8NBN7 331 aa27.27■■□□□ 1.96
PVT1-201ENST00000504719 C2orf15Q8WU43 125 aaKnown RBP27.27■■□□□ 1.96
PVT1-201ENST00000504719 ELSPBP1Q96BH3 223 aa27.27■■□□□ 1.96
PVT1-201ENST00000504719 PLA2G2FQ9BZM2 168 aa27.27■■□□□ 1.96
PVT1-201ENST00000504719 ARHGEF3Q9NR81 526 aa27.27■■□□□ 1.96
PVT1-201ENST00000504719 CGNQ9P2M7 1197 aaKnown RBP27.27■■□□□ 1.96
PVT1-201ENST00000504719 ASB3Q9Y575 518 aa27.27■■□□□ 1.96
PVT1-201ENST00000504719 HUS1O60921 280 aa27.26■■□□□ 1.95
PVT1-201ENST00000504719 SOAT2O75908 522 aa27.26■■□□□ 1.95
PVT1-201ENST00000504719 TNNC2P02585 160 aa27.26■■□□□ 1.95
PVT1-201ENST00000504719 TUFMP49411 452 aaKnown RBP27.26■■□□□ 1.95
PVT1-201ENST00000504719 CYP2J2P51589 502 aa27.26■■□□□ 1.95
PVT1-201ENST00000504719 STK4Q13043 487 aa27.26■■□□□ 1.95
PVT1-201ENST00000504719 PSMD2Q13200 908 aa27.26■■□□□ 1.95
PVT1-201ENST00000504719 DUOXA2Q1HG44 320 aa27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms