RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 DCAF17Q5H9S7 520 aaPredicted RBP5.99□□□□□ -1.45
TRAPPC13-205ENST00000504243 METTL24Q5JXM2 366 aa5.99□□□□□ -1.45
TRAPPC13-205ENST00000504243 SPTY2D1Q68D10 685 aaPredicted RBP5.99□□□□□ -1.45
TRAPPC13-205ENST00000504243 FOXR2Q6PJQ5 311 aa5.99□□□□□ -1.45
TRAPPC13-205ENST00000504243 CERS3Q8IU89 383 aa5.99□□□□□ -1.45
TRAPPC13-205ENST00000504243 SMC5Q8IY18 1101 aa5.99□□□□□ -1.45
TRAPPC13-205ENST00000504243 TXLNBQ8N3L3 684 aa5.99□□□□□ -1.45
TRAPPC13-205ENST00000504243 NSUN7Q8NE18 718 aaKnown RBP5.99□□□□□ -1.45
TRAPPC13-205ENST00000504243 NUP133Q8WUM0 1156 aa5.99□□□□□ -1.45
TRAPPC13-205ENST00000504243 MNTQ99583 582 aa5.99□□□□□ -1.45
TRAPPC13-205ENST00000504243 CNPPD1Q9BV87 410 aa5.99□□□□□ -1.45
TRAPPC13-205ENST00000504243 TLR10Q9BXR5 811 aa5.99□□□□□ -1.45
TRAPPC13-205ENST00000504243 GPR35Q9HC97 309 aa5.99□□□□□ -1.45
TRAPPC13-205ENST00000504243 FAM30AQ9NZY2 134 aa5.99□□□□□ -1.45
TRAPPC13-205ENST00000504243 COL20A1Q9P218 1284 aa5.99□□□□□ -1.45
TRAPPC13-205ENST00000504243 HDAC9Q9UKV0 1011 aa5.99□□□□□ -1.45
TRAPPC13-205ENST00000504243 AGAP1Q9UPQ3 857 aa5.99□□□□□ -1.45
TRAPPC13-205ENST00000504243 ATP11BQ9Y2G3 1177 aa5.99□□□□□ -1.45
TRAPPC13-205ENST00000504243 LOC102724159A0A0B4J2E5 919 aa5.98□□□□□ -1.45
TRAPPC13-205ENST00000504243 TRIM43BA6NCK2 446 aa5.98□□□□□ -1.45
TRAPPC13-205ENST00000504243 TMEM233B4DJY2 109 aa5.98□□□□□ -1.45
TRAPPC13-205ENST00000504243 LEFTY2O00292 366 aa5.98□□□□□ -1.45
TRAPPC13-205ENST00000504243 POLRMTO00411 1230 aaKnown RBP5.98□□□□□ -1.45
TRAPPC13-205ENST00000504243 FCER1AP12319 257 aa5.98□□□□□ -1.45
TRAPPC13-205ENST00000504243 INSRRP14616 1297 aa5.98□□□□□ -1.45
TRAPPC13-205ENST00000504243 ABCB4P21439 1286 aa5.98□□□□□ -1.45
TRAPPC13-205ENST00000504243 ACRV1P26436 265 aa5.98□□□□□ -1.45
TRAPPC13-205ENST00000504243 APOBEC3AP31941 199 aaPredicted RBP5.98□□□□□ -1.45
TRAPPC13-205ENST00000504243 SLC11A2P49281 568 aa5.98□□□□□ -1.45
TRAPPC13-205ENST00000504243 MAN2A2P49641 1150 aa5.98□□□□□ -1.45
TRAPPC13-205ENST00000504243 ARFIP2P53365 341 aa5.98□□□□□ -1.45
TRAPPC13-205ENST00000504243 PIGFQ07326 219 aa5.98□□□□□ -1.45
TRAPPC13-205ENST00000504243 PWP2Q15269 919 aaKnown RBP5.98□□□□□ -1.45
TRAPPC13-205ENST00000504243 GRAMD1BQ3KR37 738 aa5.98□□□□□ -1.45
TRAPPC13-205ENST00000504243 SPDYAQ5MJ70 313 aa5.98□□□□□ -1.45
TRAPPC13-205ENST00000504243 IZUMO3Q5VZ72 239 aa5.98□□□□□ -1.45
TRAPPC13-205ENST00000504243 HIBCHQ6NVY1 386 aaPredicted RBP5.98□□□□□ -1.45
TRAPPC13-205ENST00000504243 Q6ZRM9 215 aa5.98□□□□□ -1.45
TRAPPC13-205ENST00000504243 SYT12Q8IV01 421 aa5.98□□□□□ -1.45
TRAPPC13-205ENST00000504243 SH3RF3Q8TEJ3 882 aaPredicted RBP5.98□□□□□ -1.45
TRAPPC13-205ENST00000504243 RAPGEF4Q8WZA2 1011 aa5.98□□□□□ -1.45
TRAPPC13-205ENST00000504243 KIAA1191Q96A73 305 aa5.98□□□□□ -1.45
TRAPPC13-205ENST00000504243 TRIM43Q96BQ3 446 aaPredicted RBP5.98□□□□□ -1.45
TRAPPC13-205ENST00000504243 NMD3Q96D46 503 aaKnown RBP5.98□□□□□ -1.45
TRAPPC13-205ENST00000504243 IQCDQ96DY2 449 aa5.98□□□□□ -1.45
TRAPPC13-205ENST00000504243 PNKPQ96T60 521 aa5.98□□□□□ -1.45
TRAPPC13-205ENST00000504243 BRIP1Q9BX63 1249 aa5.98□□□□□ -1.45
TRAPPC13-205ENST00000504243 TTYH3Q9C0H2 523 aa5.98□□□□□ -1.45
TRAPPC13-205ENST00000504243 MS4A7Q9GZW8 240 aaPredicted RBP5.98□□□□□ -1.45
TRAPPC13-205ENST00000504243 PPCSQ9HAB8 311 aa5.98□□□□□ -1.45
TRAPPC13-205ENST00000504243 SERHLQ9NQF3 203 aa5.98□□□□□ -1.45
TRAPPC13-205ENST00000504243 TBC1D23Q9NUY8 699 aa5.98□□□□□ -1.45
TRAPPC13-205ENST00000504243 ZSCAN32Q9NX65 697 aa5.98□□□□□ -1.45
TRAPPC13-205ENST00000504243 GPRC5BQ9NZH0 403 aa5.98□□□□□ -1.45
TRAPPC13-205ENST00000504243 XPR1Q9UBH6 696 aa5.98□□□□□ -1.45
TRAPPC13-205ENST00000504243 CDC23Q9UJX2 597 aa5.98□□□□□ -1.45
TRAPPC13-205ENST00000504243 PADI4Q9UM07 663 aa5.98□□□□□ -1.45
TRAPPC13-205ENST00000504243 SORCS3Q9UPU3 1222 aa5.98□□□□□ -1.45
TRAPPC13-205ENST00000504243 MTO1Q9Y2Z2 717 aaKnown RBP5.98□□□□□ -1.45
TRAPPC13-205ENST00000504243 PCDHGB2Q9Y5G2 931 aa5.98□□□□□ -1.45
TRAPPC13-205ENST00000504243 AATKQ6ZMQ8 1374 aa5.97□□□□□ -1.45
TRAPPC13-205ENST00000504243 ABHD14A-ACY1A0A1B0GW23 586 aa5.97□□□□□ -1.45
TRAPPC13-205ENST00000504243 KRTAP23-1A1A580 65 aa5.97□□□□□ -1.45
TRAPPC13-205ENST00000504243 PYCARD-AS1I3L0S3 204 aa5.97□□□□□ -1.45
TRAPPC13-205ENST00000504243 THAP12O43422 761 aa5.97□□□□□ -1.45
TRAPPC13-205ENST00000504243 DNAJB5O75953 348 aa5.97□□□□□ -1.45
TRAPPC13-205ENST00000504243 RECQL4O94761 1208 aa5.97□□□□□ -1.45
TRAPPC13-205ENST00000504243 SCAF4O95104 1147 aaKnown RBP5.97□□□□□ -1.45
TRAPPC13-205ENST00000504243 PIM1P11309 404 aaPredicted RBP5.97□□□□□ -1.45
TRAPPC13-205ENST00000504243 CHRM3P20309 590 aa5.97□□□□□ -1.45
TRAPPC13-205ENST00000504243 TRAPPC10P48553 1259 aa5.97□□□□□ -1.45
TRAPPC13-205ENST00000504243 KRTAP10-2P60368 255 aa5.97□□□□□ -1.45
TRAPPC13-205ENST00000504243 SATB1Q01826 763 aa5.97□□□□□ -1.45
TRAPPC13-205ENST00000504243 PMS2P11Q13670 270 aa5.97□□□□□ -1.45
TRAPPC13-205ENST00000504243 ARL13BQ3SXY8 428 aa5.97□□□□□ -1.45
TRAPPC13-205ENST00000504243 FAM160B1Q5W0V3 765 aa5.97□□□□□ -1.45
TRAPPC13-205ENST00000504243 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.97□□□□□ -1.45
TRAPPC13-205ENST00000504243 RNF44Q7L0R7 432 aa5.97□□□□□ -1.45
TRAPPC13-205ENST00000504243 ATP11CQ8NB49 1132 aa5.97□□□□□ -1.45
TRAPPC13-205ENST00000504243 POF1BQ8WVV4 589 aa5.97□□□□□ -1.45
TRAPPC13-205ENST00000504243 MAML1Q92585 1016 aa5.97□□□□□ -1.45
TRAPPC13-205ENST00000504243 SNX22Q96L94 193 aa5.97□□□□□ -1.45
TRAPPC13-205ENST00000504243 TRIB1Q96RU8 372 aa5.97□□□□□ -1.45
TRAPPC13-205ENST00000504243 ZSWIM1Q9BR11 485 aa5.97□□□□□ -1.45
TRAPPC13-205ENST00000504243 SELENOOQ9BVL4 669 aa5.97□□□□□ -1.45
TRAPPC13-205ENST00000504243 RNPEPQ9H4A4 650 aa5.97□□□□□ -1.45
TRAPPC13-205ENST00000504243 SMURF2Q9HAU4 748 aa5.97□□□□□ -1.45
TRAPPC13-205ENST00000504243 A1CFQ9NQ94 594 aaKnown RBP5.97□□□□□ -1.45
TRAPPC13-205ENST00000504243 TRPM5Q9NZQ8 1165 aa5.97□□□□□ -1.45
TRAPPC13-205ENST00000504243 MAGED2Q9UNF1 606 aaPredicted RBP5.97□□□□□ -1.45
TRAPPC13-205ENST00000504243 PAXBP1Q9Y5B6 917 aa5.97□□□□□ -1.45
TRAPPC13-205ENST00000504243 E9PLN8 166 aa5.96□□□□□ -1.46
TRAPPC13-205ENST00000504243 SPATA31D3P0C874 917 aa5.96□□□□□ -1.46
TRAPPC13-205ENST00000504243 HARSP12081 509 aaKnown RBP5.96□□□□□ -1.46
TRAPPC13-205ENST00000504243 TSHRP16473 764 aa5.96□□□□□ -1.46
TRAPPC13-205ENST00000504243 GCSHP23434 173 aa5.96□□□□□ -1.46
TRAPPC13-205ENST00000504243 CARSP49589 748 aaKnown RBP5.96□□□□□ -1.46
TRAPPC13-205ENST00000504243 RABGGTBP53611 331 aa5.96□□□□□ -1.46
TRAPPC13-205ENST00000504243 TRIM14Q14142 442 aa5.96□□□□□ -1.46
TRAPPC13-205ENST00000504243 USP39Q53GS9 565 aaKnown RBP5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms