RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 MYL2P10916 166 aa17.29■□□□□ 0.36
PCDHA1-203ENST00000504120 NPEPPSP55786 919 aa17.29■□□□□ 0.36
PCDHA1-203ENST00000504120 RFX8Q6ZV50 586 aa17.29■□□□□ 0.36
PCDHA1-203ENST00000504120 DCP1BQ8IZD4 617 aaKnown RBP17.29■□□□□ 0.36
PCDHA1-203ENST00000504120 MRPL1Q9BYD6 325 aaKnown RBP17.29■□□□□ 0.36
PCDHA1-203ENST00000504120 CELF4Q9BZC1 486 aaKnown RBP17.29■□□□□ 0.36
PCDHA1-203ENST00000504120 RUBCNLQ9H714 662 aa17.29■□□□□ 0.36
PCDHA1-203ENST00000504120 TRAF3IP3Q9Y228 551 aa17.29■□□□□ 0.36
PCDHA1-203ENST00000504120 PNPLA4P41247 253 aa17.29■□□□□ 0.36
PCDHA1-203ENST00000504120 USP33Q8TEY7 942 aa17.29■□□□□ 0.36
PCDHA1-203ENST00000504120 TARS2Q9BW92 718 aaKnown RBP17.29■□□□□ 0.36
PCDHA1-203ENST00000504120 ADAM33Q9BZ11 813 aa17.29■□□□□ 0.36
PCDHA1-203ENST00000504120 TMEM39BQ9GZU3 492 aa17.29■□□□□ 0.36
PCDHA1-203ENST00000504120 PSD3Q9NYI0 1048 aa17.29■□□□□ 0.36
PCDHA1-203ENST00000504120 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.29■□□□□ 0.36
PCDHA1-203ENST00000504120 GGT7Q9UJ14 662 aa17.29■□□□□ 0.36
PCDHA1-203ENST00000504120 GRID1Q9ULK0 1009 aa17.29■□□□□ 0.36
PCDHA1-203ENST00000504120 GRAP2O75791 330 aa17.28■□□□□ 0.36
PCDHA1-203ENST00000504120 C6orf222P0C671 652 aaPredicted RBP17.28■□□□□ 0.36
PCDHA1-203ENST00000504120 RPS6P62753 249 aaKnown RBP17.28■□□□□ 0.36
PCDHA1-203ENST00000504120 GOLGA7BQ2TAP0 167 aa17.28■□□□□ 0.36
PCDHA1-203ENST00000504120 MFN1Q8IWA4 741 aa17.28■□□□□ 0.36
PCDHA1-203ENST00000504120 AGBL3Q8NEM8 1001 aa17.28■□□□□ 0.36
PCDHA1-203ENST00000504120 TAAR1Q96RJ0 339 aa17.28■□□□□ 0.36
PCDHA1-203ENST00000504120 PI4K2AQ9BTU6 479 aa17.28■□□□□ 0.36
PCDHA1-203ENST00000504120 GGA3Q9NZ52 723 aa17.28■□□□□ 0.36
PCDHA1-203ENST00000504120 NDUFS3O75489 264 aa17.28■□□□□ 0.36
PCDHA1-203ENST00000504120 LONP2Q86WA8 852 aa17.28■□□□□ 0.36
PCDHA1-203ENST00000504120 CERKQ8TCT0 537 aa17.28■□□□□ 0.36
PCDHA1-203ENST00000504120 ATG4CQ96DT6 458 aa17.28■□□□□ 0.36
PCDHA1-203ENST00000504120 HPDLQ96IR7 371 aa17.28■□□□□ 0.36
PCDHA1-203ENST00000504120 MAP2P11137 1827 aaKnown RBP17.28■□□□□ 0.36
PCDHA1-203ENST00000504120 PYGLP06737 847 aa17.28■□□□□ 0.36
PCDHA1-203ENST00000504120 CYP2C8P10632 490 aa17.28■□□□□ 0.36
PCDHA1-203ENST00000504120 CUL2Q13617 745 aa17.28■□□□□ 0.36
PCDHA1-203ENST00000504120 LAMC2Q13753 1193 aa17.28■□□□□ 0.36
PCDHA1-203ENST00000504120 BOLA3Q53S33 107 aa17.28■□□□□ 0.36
PCDHA1-203ENST00000504120 NUDT18Q6ZVK8 323 aa17.28■□□□□ 0.36
PCDHA1-203ENST00000504120 SLC13A5Q86YT5 568 aaPredicted RBP17.28■□□□□ 0.36
PCDHA1-203ENST00000504120 LRRC71Q8N4P6 559 aa17.28■□□□□ 0.36
PCDHA1-203ENST00000504120 PABPC5Q96DU9 382 aaKnown RBP17.28■□□□□ 0.36
PCDHA1-203ENST00000504120 C20orf96Q9NUD7 363 aaPredicted RBP17.28■□□□□ 0.36
PCDHA1-203ENST00000504120 NAGPAQ9UK23 515 aa17.28■□□□□ 0.36
PCDHA1-203ENST00000504120 CTSHP09668 335 aa17.28■□□□□ 0.36
PCDHA1-203ENST00000504120 CYP2C9P11712 490 aa17.28■□□□□ 0.36
PCDHA1-203ENST00000504120 GJB7Q6PEY0 223 aa17.28■□□□□ 0.36
PCDHA1-203ENST00000504120 C16orf89Q6UX73 402 aa17.28■□□□□ 0.36
PCDHA1-203ENST00000504120 TRPM8Q7Z2W7 1104 aa17.28■□□□□ 0.36
PCDHA1-203ENST00000504120 REXO1L1PQ8IX06 675 aa17.28■□□□□ 0.36
PCDHA1-203ENST00000504120 RIN2Q8WYP3 895 aaPredicted RBP17.28■□□□□ 0.36
PCDHA1-203ENST00000504120 AURKCQ9UQB9 309 aa17.28■□□□□ 0.36
PCDHA1-203ENST00000504120 PSTPIP1O43586 416 aa17.27■□□□□ 0.36
PCDHA1-203ENST00000504120 KRT16P08779 473 aa17.27■□□□□ 0.36
PCDHA1-203ENST00000504120 FIGNQ5HY92 759 aa17.27■□□□□ 0.36
PCDHA1-203ENST00000504120 NOTUMQ6P988 496 aa17.27■□□□□ 0.36
PCDHA1-203ENST00000504120 SLC7A14Q8TBB6 771 aa17.27■□□□□ 0.36
PCDHA1-203ENST00000504120 ZSWIM1Q9BR11 485 aa17.27■□□□□ 0.36
PCDHA1-203ENST00000504120 RUSC1Q9BVN2 902 aa17.27■□□□□ 0.36
PCDHA1-203ENST00000504120 FRMD8P1Q9BZ68 369 aaPredicted RBP17.27■□□□□ 0.36
PCDHA1-203ENST00000504120 VPS33BQ9H267 617 aa17.27■□□□□ 0.36
PCDHA1-203ENST00000504120 METTL5Q9NRN9 209 aaKnown RBP17.27■□□□□ 0.36
PCDHA1-203ENST00000504120 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.27■□□□□ 0.36
PCDHA1-203ENST00000504120 HPSEQ9Y251 543 aa17.27■□□□□ 0.36
PCDHA1-203ENST00000504120 SLC30A1Q9Y6M5 507 aa17.27■□□□□ 0.36
PCDHA1-203ENST00000504120 SLC4A7Q9Y6M7 1214 aa17.27■□□□□ 0.36
PCDHA1-203ENST00000504120 MST1RQ04912 1400 aa17.27■□□□□ 0.36
PCDHA1-203ENST00000504120 RAET1EQ8TD07 263 aa17.27■□□□□ 0.36
PCDHA1-203ENST00000504120 PON1P27169 355 aa17.27■□□□□ 0.36
PCDHA1-203ENST00000504120 KCNJ1P48048 391 aa17.27■□□□□ 0.36
PCDHA1-203ENST00000504120 DGKDQ16760 1214 aa17.27■□□□□ 0.36
PCDHA1-203ENST00000504120 TRIM65Q6PJ69 517 aa17.27■□□□□ 0.36
PCDHA1-203ENST00000504120 DDX42Q86XP3 938 aaKnown RBP eCLIP17.27■□□□□ 0.36
PCDHA1-203ENST00000504120 CMTM5Q96DZ9 223 aa17.27■□□□□ 0.36
PCDHA1-203ENST00000504120 THAP2Q9H0W7 228 aa17.27■□□□□ 0.36
PCDHA1-203ENST00000504120 SUPT3HO75486 399 aa17.27■□□□□ 0.35
PCDHA1-203ENST00000504120 ALDH1A1P00352 501 aa17.27■□□□□ 0.35
PCDHA1-203ENST00000504120 BRD2P25440 801 aaKnown RBP17.27■□□□□ 0.35
PCDHA1-203ENST00000504120 GNL1P36915 607 aaPredicted RBP17.27■□□□□ 0.35
PCDHA1-203ENST00000504120 FLOT2Q14254 428 aa17.27■□□□□ 0.35
PCDHA1-203ENST00000504120 DCAF6Q58WW2 860 aa17.27■□□□□ 0.35
PCDHA1-203ENST00000504120 POTEAQ6S8J7 498 aa17.27■□□□□ 0.35
PCDHA1-203ENST00000504120 GPRC5AQ8NFJ5 357 aa17.27■□□□□ 0.35
PCDHA1-203ENST00000504120 UBA3Q8TBC4 463 aa17.27■□□□□ 0.35
PCDHA1-203ENST00000504120 ERP27Q96DN0 273 aa17.27■□□□□ 0.35
PCDHA1-203ENST00000504120 SERPINB12Q96P63 405 aa17.27■□□□□ 0.35
PCDHA1-203ENST00000504120 DEFB129Q9H1M3 183 aa17.27■□□□□ 0.35
PCDHA1-203ENST00000504120 GOLPH3Q9H4A6 298 aa17.27■□□□□ 0.35
PCDHA1-203ENST00000504120 STIP1P31948 543 aaKnown RBP17.27■□□□□ 0.35
PCDHA1-203ENST00000504120 COBLL1Q53SF7 1204 aa17.27■□□□□ 0.35
PCDHA1-203ENST00000504120 DACH2Q96NX9 599 aa17.27■□□□□ 0.35
PCDHA1-203ENST00000504120 FAM118BQ9BPY3 351 aa17.27■□□□□ 0.35
PCDHA1-203ENST00000504120 HACL1Q9UJ83 578 aa17.27■□□□□ 0.35
PCDHA1-203ENST00000504120 FER1L4A9Z1Z3 1794 aa17.26■□□□□ 0.35
PCDHA1-203ENST00000504120 RASSF10A6NK89 507 aa17.26■□□□□ 0.35
PCDHA1-203ENST00000504120 MAP4P27816 1152 aaKnown RBP17.26■□□□□ 0.35
PCDHA1-203ENST00000504120 SAMD3Q8N6K7 520 aa17.26■□□□□ 0.35
PCDHA1-203ENST00000504120 OTUB1Q96FW1 271 aaPredicted RBP17.26■□□□□ 0.35
PCDHA1-203ENST00000504120 GMPSP49915 693 aaPredicted RBP17.26■□□□□ 0.35
PCDHA1-203ENST00000504120 GEMIN4P57678 1058 aaKnown RBP17.26■□□□□ 0.35
PCDHA1-203ENST00000504120 RRM2BQ7LG56 351 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms