RNA–Protein interactions for RNA: ENST00000504010.5

NR1I3-219, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 944 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-219ENST00000504010 RFX1P22670 979 aa9.76□□□□□ -0.85
NR1I3-219ENST00000504010 CA8P35219 290 aa9.76□□□□□ -0.85
NR1I3-219ENST00000504010 PPP1R2P41236 205 aa9.76□□□□□ -0.85
NR1I3-219ENST00000504010 GCLMP48507 274 aa9.76□□□□□ -0.85
NR1I3-219ENST00000504010 LMNB2Q03252 620 aa9.76□□□□□ -0.85
NR1I3-219ENST00000504010 LRRC63Q05C16 580 aa9.76□□□□□ -0.85
NR1I3-219ENST00000504010 PPP3CAQ08209 521 aa9.76□□□□□ -0.85
NR1I3-219ENST00000504010 GRIK3Q13003 919 aa9.76□□□□□ -0.85
NR1I3-219ENST00000504010 TUSC3Q13454 348 aa9.76□□□□□ -0.85
NR1I3-219ENST00000504010 NFIL3Q16649 462 aa9.76□□□□□ -0.85
NR1I3-219ENST00000504010 XKR4Q5GH76 650 aa9.76□□□□□ -0.85
NR1I3-219ENST00000504010 SPATA1Q5VX52 437 aa9.76□□□□□ -0.85
NR1I3-219ENST00000504010 TMC7Q7Z402 723 aa9.76□□□□□ -0.85
NR1I3-219ENST00000504010 DHX40Q8IX18 779 aaKnown RBP9.76□□□□□ -0.85
NR1I3-219ENST00000504010 ZC3H3Q8IXZ2 948 aaKnown RBP9.76□□□□□ -0.85
NR1I3-219ENST00000504010 PARD3BQ8TEW8 1205 aa9.76□□□□□ -0.85
NR1I3-219ENST00000504010 AUTS2Q8WXX7 1259 aa9.76□□□□□ -0.85
NR1I3-219ENST00000504010 SECISBP2LQ93073 1101 aaKnown RBP9.76□□□□□ -0.85
NR1I3-219ENST00000504010 CNOT6LQ96LI5 555 aaKnown RBP9.76□□□□□ -0.85
NR1I3-219ENST00000504010 CGRRF1Q99675 332 aa9.76□□□□□ -0.85
NR1I3-219ENST00000504010 RTKNQ9BST9 563 aa9.76□□□□□ -0.85
NR1I3-219ENST00000504010 PI4K2AQ9BTU6 479 aa9.76□□□□□ -0.85
NR1I3-219ENST00000504010 GTPBP4Q9BZE4 634 aaKnown RBP9.76□□□□□ -0.85
NR1I3-219ENST00000504010 TSPY26PQ9H489 355 aa9.76□□□□□ -0.85
NR1I3-219ENST00000504010 CBX8Q9HC52 389 aa9.76□□□□□ -0.85
NR1I3-219ENST00000504010 TAB2Q9NYJ8 693 aa9.76□□□□□ -0.85
NR1I3-219ENST00000504010 CGNQ9P2M7 1197 aaKnown RBP9.76□□□□□ -0.85
NR1I3-219ENST00000504010 CDV3Q9UKY7 258 aaKnown RBP9.76□□□□□ -0.85
NR1I3-219ENST00000504010 AGAP1Q9UPQ3 857 aa9.76□□□□□ -0.85
NR1I3-219ENST00000504010 FAN1Q9Y2M0 1017 aa9.76□□□□□ -0.85
NR1I3-219ENST00000504010 CITO14578 2027 aa9.76□□□□□ -0.85
NR1I3-219ENST00000504010 CACNA1IQ9P0X4 2223 aa9.76□□□□□ -0.85
NR1I3-219ENST00000504010 DENND4AQ7Z401 1863 aa9.76□□□□□ -0.85
NR1I3-219ENST00000504010 SPEGQ15772 3267 aa9.75□□□□□ -0.85
NR1I3-219ENST00000504010 CARNS1A5YM72 827 aa9.75□□□□□ -0.85
NR1I3-219ENST00000504010 PODXLO00592 558 aa9.75□□□□□ -0.85
NR1I3-219ENST00000504010 KIAA0391O15091 583 aaKnown RBP9.75□□□□□ -0.85
NR1I3-219ENST00000504010 SPTLC1O15269 473 aa9.75□□□□□ -0.85
NR1I3-219ENST00000504010 INPPL1O15357 1258 aa9.75□□□□□ -0.85
NR1I3-219ENST00000504010 PHACTR2O75167 634 aa9.75□□□□□ -0.85
NR1I3-219ENST00000504010 ITGB3P05106 788 aa9.75□□□□□ -0.85
NR1I3-219ENST00000504010 ADRB1P08588 477 aa9.75□□□□□ -0.85
NR1I3-219ENST00000504010 SP9P0CG40 484 aa9.75□□□□□ -0.85
NR1I3-219ENST00000504010 ERCC5P28715 1186 aaPredicted RBP9.75□□□□□ -0.85
NR1I3-219ENST00000504010 POLR2BP30876 1174 aaKnown RBP9.75□□□□□ -0.85
NR1I3-219ENST00000504010 MTIF2P46199 727 aaKnown RBP9.75□□□□□ -0.85
NR1I3-219ENST00000504010 ZNF165P49910 485 aa9.75□□□□□ -0.85
NR1I3-219ENST00000504010 ATXN1P54253 815 aaKnown RBP9.75□□□□□ -0.85
NR1I3-219ENST00000504010 SNRPFP62306 86 aaKnown RBP9.75□□□□□ -0.85
NR1I3-219ENST00000504010 DSC1Q08554 894 aa9.75□□□□□ -0.85
NR1I3-219ENST00000504010 BFSP1Q12934 665 aa9.75□□□□□ -0.85
NR1I3-219ENST00000504010 BIRC3Q13489 604 aa9.75□□□□□ -0.85
NR1I3-219ENST00000504010 NCAPHQ15003 741 aa9.75□□□□□ -0.85
NR1I3-219ENST00000504010 ZBTB6Q15916 424 aa9.75□□□□□ -0.85
NR1I3-219ENST00000504010 KYAT1Q16773 422 aa9.75□□□□□ -0.85
NR1I3-219ENST00000504010 TDRD10Q5VZ19 366 aaKnown RBP9.75□□□□□ -0.85
NR1I3-219ENST00000504010 SPOPLQ6IQ16 392 aa9.75□□□□□ -0.85
NR1I3-219ENST00000504010 PHLDB3Q6NSJ2 640 aa9.75□□□□□ -0.85
NR1I3-219ENST00000504010 LRSAM1Q6UWE0 723 aa9.75□□□□□ -0.85
NR1I3-219ENST00000504010 CD300LGQ6UXG3 332 aa9.75□□□□□ -0.85
NR1I3-219ENST00000504010 FILIP1Q7Z7B0 1213 aa9.75□□□□□ -0.85
NR1I3-219ENST00000504010 C1orf127Q8N9H9 656 aa9.75□□□□□ -0.85
NR1I3-219ENST00000504010 SUMF1Q8NBK3 374 aa9.75□□□□□ -0.85
NR1I3-219ENST00000504010 BEST2Q8NFU1 509 aa9.75□□□□□ -0.85
NR1I3-219ENST00000504010 ANKRD36BP1Q96IX9 119 aa9.75□□□□□ -0.85
NR1I3-219ENST00000504010 CEP63Q96MT8 703 aa9.75□□□□□ -0.85
NR1I3-219ENST00000504010 ZNF558Q96NG5 402 aa9.75□□□□□ -0.85
NR1I3-219ENST00000504010 VN1R3Q9BXE9 311 aa9.75□□□□□ -0.85
NR1I3-219ENST00000504010 MRPL9Q9BYD2 267 aaKnown RBP9.75□□□□□ -0.85
NR1I3-219ENST00000504010 PLEKHA5Q9HAU0 1116 aa9.75□□□□□ -0.85
NR1I3-219ENST00000504010 KIAA1586Q9HCI6 787 aa9.75□□□□□ -0.85
NR1I3-219ENST00000504010 INTS13Q9NVM9 706 aa9.75□□□□□ -0.85
NR1I3-219ENST00000504010 MARCH5Q9NX47 278 aa9.75□□□□□ -0.85
NR1I3-219ENST00000504010 SPG21Q9NZD8 308 aa9.75□□□□□ -0.85
NR1I3-219ENST00000504010 KANSL3Q9P2N6 904 aa9.75□□□□□ -0.85
NR1I3-219ENST00000504010 SIX4Q9UIU6 781 aa9.75□□□□□ -0.85
NR1I3-219ENST00000504010 UBQLN1Q9UMX0 589 aaKnown RBP9.75□□□□□ -0.85
NR1I3-219ENST00000504010 TIMM13Q9Y5L4 95 aaPredicted RBP9.75□□□□□ -0.85
NR1I3-219ENST00000504010 CNOT1A5YKK6 2376 aaKnown RBP9.75□□□□□ -0.85
NR1I3-219ENST00000504010 PDCD11Q14690 1871 aaKnown RBP9.74□□□□□ -0.85
NR1I3-219ENST00000504010 C2orf71A6NGG8 1288 aa9.74□□□□□ -0.85
NR1I3-219ENST00000504010 KCNJ18B7U540 433 aa9.74□□□□□ -0.85
NR1I3-219ENST00000504010 PES1O00541 588 aaKnown RBP9.74□□□□□ -0.85
NR1I3-219ENST00000504010 C2CD2LO14523 706 aa9.74□□□□□ -0.85
NR1I3-219ENST00000504010 SLC16A3O15427 465 aaKnown RBP9.74□□□□□ -0.85
NR1I3-219ENST00000504010 TADA2AO75478 443 aa9.74□□□□□ -0.85
NR1I3-219ENST00000504010 B3GAT3O94766 335 aa9.74□□□□□ -0.85
NR1I3-219ENST00000504010 VNN1O95497 513 aa9.74□□□□□ -0.85
NR1I3-219ENST00000504010 TNNC2P02585 160 aa9.74□□□□□ -0.85
NR1I3-219ENST00000504010 ALDH2P05091 517 aa9.74□□□□□ -0.85
NR1I3-219ENST00000504010 ATP1A3P13637 1013 aa9.74□□□□□ -0.85
NR1I3-219ENST00000504010 ALDH7A1P49419 539 aaKnown RBP9.74□□□□□ -0.85
NR1I3-219ENST00000504010 MYL6P60660 151 aa9.74□□□□□ -0.85
NR1I3-219ENST00000504010 MYL5Q02045 173 aa9.74□□□□□ -0.85
NR1I3-219ENST00000504010 APBA1Q02410 837 aa9.74□□□□□ -0.85
NR1I3-219ENST00000504010 LRMPQ12912 555 aa9.74□□□□□ -0.85
NR1I3-219ENST00000504010 MYBPC2Q14324 1141 aa9.74□□□□□ -0.85
NR1I3-219ENST00000504010 KCNJ12Q14500 433 aa9.74□□□□□ -0.85
NR1I3-219ENST00000504010 HSP90AA2PQ14568 343 aaPredicted RBP9.74□□□□□ -0.85
NR1I3-219ENST00000504010 IQCB1Q15051 598 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms