RNA–Protein interactions for RNA: ENST00000503341.1

ARHGEF28-205, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 2

Gene ARHGEF28, Length 1,926 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-205ENST00000503341 NBPF20Q3BBV1 942 aa20.25■□□□□ 0.83
ARHGEF28-205ENST00000503341 DENND1BQ6P3S1 775 aa20.25■□□□□ 0.83
ARHGEF28-205ENST00000503341 FEZF2Q8TBJ5 459 aa20.25■□□□□ 0.83
ARHGEF28-205ENST00000503341 TMEM176AQ96HP8 235 aa20.25■□□□□ 0.83
ARHGEF28-205ENST00000503341 CELF4Q9BZC1 486 aaKnown RBP20.25■□□□□ 0.83
ARHGEF28-205ENST00000503341 PLEKHA4Q9H4M7 779 aa20.25■□□□□ 0.83
ARHGEF28-205ENST00000503341 SLITRK6Q9H5Y7 841 aa20.25■□□□□ 0.83
ARHGEF28-205ENST00000503341 FAM124BQ9H5Z6 455 aaPredicted RBP20.25■□□□□ 0.83
ARHGEF28-205ENST00000503341 SPC25Q9HBM1 224 aa20.25■□□□□ 0.83
ARHGEF28-205ENST00000503341 GTF2IRD1Q9UHL9 959 aa20.25■□□□□ 0.83
ARHGEF28-205ENST00000503341 CEP83Q9Y592 693 aa20.25■□□□□ 0.83
ARHGEF28-205ENST00000503341 TCRBV5S1A1TA0A578 114 aa20.25■□□□□ 0.83
ARHGEF28-205ENST00000503341 ZSCAN5CA6NGD5 496 aaPredicted RBP20.25■□□□□ 0.83
ARHGEF28-205ENST00000503341 RECQL4O94761 1208 aa20.25■□□□□ 0.83
ARHGEF28-205ENST00000503341 RARBP10826 455 aa20.25■□□□□ 0.83
ARHGEF28-205ENST00000503341 SEL1L2Q5TEA6 688 aa20.25■□□□□ 0.83
ARHGEF28-205ENST00000503341 UBXN6Q9BZV1 441 aa20.25■□□□□ 0.83
ARHGEF28-205ENST00000503341 AKAP5P24588 427 aa20.24■□□□□ 0.83
ARHGEF28-205ENST00000503341 PTPN11Q06124 597 aaPredicted RBP20.24■□□□□ 0.83
ARHGEF28-205ENST00000503341 INCA1Q0VD86 236 aa20.24■□□□□ 0.83
ARHGEF28-205ENST00000503341 MYO1EQ12965 1108 aa20.24■□□□□ 0.83
ARHGEF28-205ENST00000503341 ORC1Q13415 861 aa20.24■□□□□ 0.83
ARHGEF28-205ENST00000503341 BEST2Q8NFU1 509 aa20.24■□□□□ 0.83
ARHGEF28-205ENST00000503341 BARX2Q9UMQ3 279 aaPredicted RBP20.24■□□□□ 0.83
ARHGEF28-205ENST00000503341 TRIP11Q15643 1979 aa20.24■□□□□ 0.83
ARHGEF28-205ENST00000503341 SCN10AQ9Y5Y9 1956 aa20.24■□□□□ 0.83
ARHGEF28-205ENST00000503341 TLR3O15455 904 aaKnown RBP20.23■□□□□ 0.83
ARHGEF28-205ENST00000503341 ADAMTS4O75173 837 aa20.23■□□□□ 0.83
ARHGEF28-205ENST00000503341 HSPA6P17066 643 aa20.23■□□□□ 0.83
ARHGEF28-205ENST00000503341 PPP2R5EQ16537 467 aa20.23■□□□□ 0.83
ARHGEF28-205ENST00000503341 ADAT2Q7Z6V5 191 aaKnown RBP20.23■□□□□ 0.83
ARHGEF28-205ENST00000503341 ERICH1Q86X53 443 aa20.23■□□□□ 0.83
ARHGEF28-205ENST00000503341 APOL6Q9BWW8 343 aa20.23■□□□□ 0.83
ARHGEF28-205ENST00000503341 ERVK-5Q9HDB9 667 aa20.23■□□□□ 0.83
ARHGEF28-205ENST00000503341 TUBGCP4Q9UGJ1 667 aa20.23■□□□□ 0.83
ARHGEF28-205ENST00000503341 AMACRQ9UHK6 382 aa20.23■□□□□ 0.83
ARHGEF28-205ENST00000503341 GOLGA6L10A0A0M3HER8 536 aa20.23■□□□□ 0.83
ARHGEF28-205ENST00000503341 ESYT3A0FGR9 886 aa20.23■□□□□ 0.83
ARHGEF28-205ENST00000503341 BHMG1C9JSJ3 638 aaPredicted RBP20.23■□□□□ 0.83
ARHGEF28-205ENST00000503341 GJB6O95452 261 aa20.23■□□□□ 0.83
ARHGEF28-205ENST00000503341 TNNT3P45378 269 aaPredicted RBP20.23■□□□□ 0.83
ARHGEF28-205ENST00000503341 CARSP49589 748 aaKnown RBP20.23■□□□□ 0.83
ARHGEF28-205ENST00000503341 MRPS6P82932 125 aaKnown RBP20.23■□□□□ 0.83
ARHGEF28-205ENST00000503341 SP3Q02447 781 aa20.23■□□□□ 0.83
ARHGEF28-205ENST00000503341 GLRA4Q5JXX5 417 aa20.23■□□□□ 0.83
ARHGEF28-205ENST00000503341 GDF6Q6KF10 455 aaPredicted RBP20.23■□□□□ 0.83
ARHGEF28-205ENST00000503341 FAM228AQ86W67 206 aa20.23■□□□□ 0.83
ARHGEF28-205ENST00000503341 TTC39CQ8N584 583 aa20.23■□□□□ 0.83
ARHGEF28-205ENST00000503341 CCDC26Q8TAB7 109 aa20.23■□□□□ 0.83
ARHGEF28-205ENST00000503341 CASKIN2Q8WXE0 1202 aa20.23■□□□□ 0.83
ARHGEF28-205ENST00000503341 C18orf25Q96B23 403 aaPredicted RBP20.23■□□□□ 0.83
ARHGEF28-205ENST00000503341 TMEM191CA6NGB0 347 aa20.22■□□□□ 0.83
ARHGEF28-205ENST00000503341 PPEF2O14830 753 aa20.22■□□□□ 0.83
ARHGEF28-205ENST00000503341 VDRP11473 427 aa20.22■□□□□ 0.83
ARHGEF28-205ENST00000503341 NDST1P52848 882 aa20.22■□□□□ 0.83
ARHGEF28-205ENST00000503341 EPHB4P54760 987 aa20.22■□□□□ 0.83
ARHGEF28-205ENST00000503341 XKR4Q5GH76 650 aa20.22■□□□□ 0.83
ARHGEF28-205ENST00000503341 MAATS1Q7Z4T9 603 aa20.22■□□□□ 0.83
ARHGEF28-205ENST00000503341 LRRC52Q8N7C0 313 aa20.22■□□□□ 0.83
ARHGEF28-205ENST00000503341 GDAP1L1Q96MZ0 367 aa20.22■□□□□ 0.83
ARHGEF28-205ENST00000503341 RNF39Q9H2S5 420 aa20.22■□□□□ 0.83
ARHGEF28-205ENST00000503341 VIPAS39Q9H9C1 493 aa20.22■□□□□ 0.83
ARHGEF28-205ENST00000503341 XPNPEP3Q9NQH7 507 aa20.22■□□□□ 0.83
ARHGEF28-205ENST00000503341 RNF186Q9NXI6 227 aa20.22■□□□□ 0.83
ARHGEF28-205ENST00000503341 CYTH4Q9UIA0 394 aa20.22■□□□□ 0.83
ARHGEF28-205ENST00000503341 UBQLN1Q9UMX0 589 aaKnown RBP20.22■□□□□ 0.83
ARHGEF28-205ENST00000503341 A0A0U1RQG5 324 aaPredicted RBP20.21■□□□□ 0.83
ARHGEF28-205ENST00000503341 CCND3P30281 292 aaPredicted RBP20.21■□□□□ 0.83
ARHGEF28-205ENST00000503341 RPL7AP62424 266 aaKnown RBP20.21■□□□□ 0.83
ARHGEF28-205ENST00000503341 SMC1AQ14683 1233 aaKnown RBP20.21■□□□□ 0.83
ARHGEF28-205ENST00000503341 CNGA2Q16280 664 aa20.21■□□□□ 0.83
ARHGEF28-205ENST00000503341 PPP1R15BQ5SWA1 713 aa20.21■□□□□ 0.83
ARHGEF28-205ENST00000503341 EMBQ6PCB8 327 aa20.21■□□□□ 0.83
ARHGEF28-205ENST00000503341 SLC13A5Q86YT5 568 aaPredicted RBP20.21■□□□□ 0.83
ARHGEF28-205ENST00000503341 ZDHHC14Q8IZN3 488 aa20.21■□□□□ 0.83
ARHGEF28-205ENST00000503341 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.21■□□□□ 0.83
ARHGEF28-205ENST00000503341 CAPNS2Q96L46 248 aa20.21■□□□□ 0.83
ARHGEF28-205ENST00000503341 HEXIM2Q96MH2 286 aaKnown RBP20.21■□□□□ 0.83
ARHGEF28-205ENST00000503341 IP6K2Q9UHH9 426 aa20.21■□□□□ 0.83
ARHGEF28-205ENST00000503341 IPPQ9Y573 584 aa20.21■□□□□ 0.83
ARHGEF28-205ENST00000503341 CDY2AQ9Y6F7 541 aa20.21■□□□□ 0.83
ARHGEF28-205ENST00000503341 SMIM28A0A1B0GU29 152 aa20.21■□□□□ 0.83
ARHGEF28-205ENST00000503341 KCNE1P15382 129 aa20.21■□□□□ 0.83
ARHGEF28-205ENST00000503341 MAN1A1P33908 653 aa20.21■□□□□ 0.83
ARHGEF28-205ENST00000503341 PAK2Q13177 524 aa20.21■□□□□ 0.83
ARHGEF28-205ENST00000503341 TRADDQ15628 312 aa20.21■□□□□ 0.83
ARHGEF28-205ENST00000503341 PTPN20Q4JDL3 420 aa20.21■□□□□ 0.83
ARHGEF28-205ENST00000503341 C9orf57Q5W0N0 161 aa20.21■□□□□ 0.83
ARHGEF28-205ENST00000503341 DNAJC24Q6P3W2 148 aa20.21■□□□□ 0.83
ARHGEF28-205ENST00000503341 SMG8Q8ND04 991 aaKnown RBP20.21■□□□□ 0.83
ARHGEF28-205ENST00000503341 IFT81Q8WYA0 676 aa20.21■□□□□ 0.83
ARHGEF28-205ENST00000503341 DDX27Q96GQ7 796 aaKnown RBP20.21■□□□□ 0.83
ARHGEF28-205ENST00000503341 TSPAN18Q96SJ8 248 aa20.21■□□□□ 0.83
ARHGEF28-205ENST00000503341 RNF19AQ9NV58 838 aa20.21■□□□□ 0.83
ARHGEF28-205ENST00000503341 KLK14Q9P0G3 267 aa20.21■□□□□ 0.83
ARHGEF28-205ENST00000503341 PARP2Q9UGN5 583 aa20.21■□□□□ 0.83
ARHGEF28-205ENST00000503341 NFU1Q9UMS0 254 aa20.21■□□□□ 0.83
ARHGEF28-205ENST00000503341 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.21■□□□□ 0.83
ARHGEF28-205ENST00000503341 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.21■□□□□ 0.83
ARHGEF28-205ENST00000503341 TRPV2Q9Y5S1 764 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms