RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 DNAI1Q9UI46 699 aa8.66□□□□□ -1.02
TOPBP1-202ENST00000503338 GTF3C4Q9UKN8 822 aa8.66□□□□□ -1.02
TOPBP1-202ENST00000503338 DSEQ9UL01 958 aa8.66□□□□□ -1.02
TOPBP1-202ENST00000503338 LRFN2Q9ULH4 789 aa8.66□□□□□ -1.02
TOPBP1-202ENST00000503338 POLIQ9UNA4 740 aa8.66□□□□□ -1.02
TOPBP1-202ENST00000503338 ATP11BQ9Y2G3 1177 aa8.66□□□□□ -1.02
TOPBP1-202ENST00000503338 JRKLQ9Y4A0 524 aa8.66□□□□□ -1.02
TOPBP1-202ENST00000503338 MACROD2A1Z1Q3 448 aa8.65□□□□□ -1.02
TOPBP1-202ENST00000503338 RCCD1A6NED2 376 aa8.65□□□□□ -1.02
TOPBP1-202ENST00000503338 TMEM189-UBE2V1I3L0A0 370 aa8.65□□□□□ -1.02
TOPBP1-202ENST00000503338 CALB1P05937 261 aa8.65□□□□□ -1.02
TOPBP1-202ENST00000503338 UNGP13051 313 aaPredicted RBP8.65□□□□□ -1.02
TOPBP1-202ENST00000503338 CD19P15391 556 aa8.65□□□□□ -1.02
TOPBP1-202ENST00000503338 WARSP23381 471 aaKnown RBP8.65□□□□□ -1.02
TOPBP1-202ENST00000503338 CDH5P33151 784 aaPredicted RBP8.65□□□□□ -1.02
TOPBP1-202ENST00000503338 NOP2P46087 812 aaKnown RBP8.65□□□□□ -1.02
TOPBP1-202ENST00000503338 AARSP49588 968 aaKnown RBP eCLIP8.65□□□□□ -1.02
TOPBP1-202ENST00000503338 RAD23BP54727 409 aa8.65□□□□□ -1.02
TOPBP1-202ENST00000503338 HADHBP55084 474 aaKnown RBP8.65□□□□□ -1.02
TOPBP1-202ENST00000503338 SOX4Q06945 474 aaPredicted RBP8.65□□□□□ -1.02
TOPBP1-202ENST00000503338 IKBKEQ14164 716 aa8.65□□□□□ -1.02
TOPBP1-202ENST00000503338 CNGA2Q16280 664 aa8.65□□□□□ -1.02
TOPBP1-202ENST00000503338 UPP1Q16831 310 aa8.65□□□□□ -1.02
TOPBP1-202ENST00000503338 DCLRE1AQ6PJP8 1040 aa8.65□□□□□ -1.02
TOPBP1-202ENST00000503338 RTN4RL1Q86UN2 441 aaPredicted RBP8.65□□□□□ -1.02
TOPBP1-202ENST00000503338 PHF13Q86YI8 300 aaPredicted RBP8.65□□□□□ -1.02
TOPBP1-202ENST00000503338 NPAS4Q8IUM7 802 aa8.65□□□□□ -1.02
TOPBP1-202ENST00000503338 GPIHBP1Q8IV16 184 aa8.65□□□□□ -1.02
TOPBP1-202ENST00000503338 SLC4A11Q8NBS3 891 aa8.65□□□□□ -1.02
TOPBP1-202ENST00000503338 OR6B3Q8NGW1 331 aa8.65□□□□□ -1.02
TOPBP1-202ENST00000503338 OLIG1Q8TAK6 271 aa8.65□□□□□ -1.02
TOPBP1-202ENST00000503338 DIS3LQ8TF46 1054 aaKnown RBP8.65□□□□□ -1.02
TOPBP1-202ENST00000503338 ZNF592Q92610 1267 aa8.65□□□□□ -1.02
TOPBP1-202ENST00000503338 LPPQ93052 612 aa8.65□□□□□ -1.02
TOPBP1-202ENST00000503338 OSBPL7Q9BZF2 842 aa8.65□□□□□ -1.02
TOPBP1-202ENST00000503338 AVENQ9NQS1 362 aaPredicted RBP8.65□□□□□ -1.02
TOPBP1-202ENST00000503338 STRIP2Q9ULQ0 834 aa8.65□□□□□ -1.02
TOPBP1-202ENST00000503338 PCDHGC5Q9Y5F6 944 aa8.65□□□□□ -1.02
TOPBP1-202ENST00000503338 PDCD11Q14690 1871 aaKnown RBP8.64□□□□□ -1.03
TOPBP1-202ENST00000503338 ABHD14A-ACY1A0A1B0GW23 586 aa8.64□□□□□ -1.03
TOPBP1-202ENST00000503338 MEIS3P2A8K0S8 358 aa8.64□□□□□ -1.03
TOPBP1-202ENST00000503338 A8MXQ7 604 aa8.64□□□□□ -1.03
TOPBP1-202ENST00000503338 CYB561D2O14569 222 aa8.64□□□□□ -1.03
TOPBP1-202ENST00000503338 KIAA0355O15063 1070 aa8.64□□□□□ -1.03
TOPBP1-202ENST00000503338 TRAPPC3O43617 180 aa8.64□□□□□ -1.03
TOPBP1-202ENST00000503338 B3GAT3O94766 335 aa8.64□□□□□ -1.03
TOPBP1-202ENST00000503338 MTA2O94776 668 aa8.64□□□□□ -1.03
TOPBP1-202ENST00000503338 TIMP1P01033 207 aa8.64□□□□□ -1.03
TOPBP1-202ENST00000503338 CYP1A2P05177 515 aa8.64□□□□□ -1.03
TOPBP1-202ENST00000503338 SETSIPP0DME0 302 aa8.64□□□□□ -1.03
TOPBP1-202ENST00000503338 ODC1P11926 461 aa8.64□□□□□ -1.03
TOPBP1-202ENST00000503338 PCSK1P29120 753 aa8.64□□□□□ -1.03
TOPBP1-202ENST00000503338 GNL1P36915 607 aaPredicted RBP8.64□□□□□ -1.03
TOPBP1-202ENST00000503338 CLCNKBP51801 687 aa8.64□□□□□ -1.03
TOPBP1-202ENST00000503338 NDST1P52848 882 aa8.64□□□□□ -1.03
TOPBP1-202ENST00000503338 CDH8P55286 799 aa8.64□□□□□ -1.03
TOPBP1-202ENST00000503338 CCL23P55773 120 aa8.64□□□□□ -1.03
TOPBP1-202ENST00000503338 NOMO3P69849 1222 aa8.64□□□□□ -1.03
TOPBP1-202ENST00000503338 TAP1Q03518 808 aa8.64□□□□□ -1.03
TOPBP1-202ENST00000503338 RNASELQ05823 741 aaKnown RBP8.64□□□□□ -1.03
TOPBP1-202ENST00000503338 GPNMBQ14956 572 aa8.64□□□□□ -1.03
TOPBP1-202ENST00000503338 SOWAHAQ2M3V2 549 aa8.64□□□□□ -1.03
TOPBP1-202ENST00000503338 ZNF394Q53GI3 561 aa8.64□□□□□ -1.03
TOPBP1-202ENST00000503338 ARHGAP17Q68EM7 881 aa8.64□□□□□ -1.03
TOPBP1-202ENST00000503338 LCLAT1Q6UWP7 414 aa8.64□□□□□ -1.03
TOPBP1-202ENST00000503338 DSTYKQ6XUX3 929 aa8.64□□□□□ -1.03
TOPBP1-202ENST00000503338 METTL23Q86XA0 190 aa8.64□□□□□ -1.03
TOPBP1-202ENST00000503338 ADGRF2Q8IZF7 708 aa8.64□□□□□ -1.03
TOPBP1-202ENST00000503338 MCOLN2Q8IZK6 566 aa8.64□□□□□ -1.03
TOPBP1-202ENST00000503338 CRYBG2Q8N1P7 616 aa8.64□□□□□ -1.03
TOPBP1-202ENST00000503338 SLC35F6Q8N357 371 aa8.64□□□□□ -1.03
TOPBP1-202ENST00000503338 TMEM199Q8N511 208 aa8.64□□□□□ -1.03
TOPBP1-202ENST00000503338 WHAMMQ8TF30 809 aa8.64□□□□□ -1.03
TOPBP1-202ENST00000503338 LINC01599Q8WXQ3 324 aa8.64□□□□□ -1.03
TOPBP1-202ENST00000503338 ELMO3Q96BJ8 720 aa8.64□□□□□ -1.03
TOPBP1-202ENST00000503338 CYFIP2Q96F07 1278 aa8.64□□□□□ -1.03
TOPBP1-202ENST00000503338 SENP8Q96LD8 212 aa8.64□□□□□ -1.03
TOPBP1-202ENST00000503338 HEXIM2Q96MH2 286 aaKnown RBP8.64□□□□□ -1.03
TOPBP1-202ENST00000503338 PCDHB18PQ96TA0 734 aa8.64□□□□□ -1.03
TOPBP1-202ENST00000503338 PPP1R12CQ9BZL4 782 aa8.64□□□□□ -1.03
TOPBP1-202ENST00000503338 SDCBP2Q9H190 292 aa8.64□□□□□ -1.03
TOPBP1-202ENST00000503338 WNT8AQ9H1J5 351 aa8.64□□□□□ -1.03
TOPBP1-202ENST00000503338 GOLGA2P5Q9HBQ8 144 aa8.64□□□□□ -1.03
TOPBP1-202ENST00000503338 MRPL47Q9HD33 250 aaKnown RBP8.64□□□□□ -1.03
TOPBP1-202ENST00000503338 MIOSQ9NXC5 875 aa8.64□□□□□ -1.03
TOPBP1-202ENST00000503338 WDR35Q9P2L0 1181 aa8.64□□□□□ -1.03
TOPBP1-202ENST00000503338 HESX1Q9UBX0 185 aa8.64□□□□□ -1.03
TOPBP1-202ENST00000503338 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.64□□□□□ -1.03
TOPBP1-202ENST00000503338 INPP5FQ9Y2H2 1132 aa8.64□□□□□ -1.03
TOPBP1-202ENST00000503338 SCINQ9Y6U3 715 aa8.64□□□□□ -1.03
TOPBP1-202ENST00000503338 TMCO5BA8MYB1 307 aa8.63□□□□□ -1.03
TOPBP1-202ENST00000503338 GABRDO14764 452 aa8.63□□□□□ -1.03
TOPBP1-202ENST00000503338 PPEF2O14830 753 aa8.63□□□□□ -1.03
TOPBP1-202ENST00000503338 BAIAP3O94812 1187 aa8.63□□□□□ -1.03
TOPBP1-202ENST00000503338 MOCS3O95396 460 aa8.63□□□□□ -1.03
TOPBP1-202ENST00000503338 POMCP01189 267 aa8.63□□□□□ -1.03
TOPBP1-202ENST00000503338 CYP11A1P05108 521 aa8.63□□□□□ -1.03
TOPBP1-202ENST00000503338 RAG1P15918 1043 aa8.63□□□□□ -1.03
TOPBP1-202ENST00000503338 PRLRP16471 622 aa8.63□□□□□ -1.03
TOPBP1-202ENST00000503338 TYMPP19971 482 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms