RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 FBXO4Q9UKT5 387 aa11.62□□□□□ -0.55
SNCA-207ENST00000502987 AGO2Q9UKV8 859 aaKnown RBP11.62□□□□□ -0.55
SNCA-207ENST00000502987 PATJQ8NI35 1801 aa11.62□□□□□ -0.55
SNCA-207ENST00000502987 FANCMQ8IYD8 2048 aa11.62□□□□□ -0.55
SNCA-207ENST00000502987 SCN1AP35498 2009 aa11.61□□□□□ -0.55
SNCA-207ENST00000502987 HEPACAM2A8MVW5 462 aa11.61□□□□□ -0.55
SNCA-207ENST00000502987 NFICP08651 508 aa11.61□□□□□ -0.55
SNCA-207ENST00000502987 TYMPP19971 482 aa11.61□□□□□ -0.55
SNCA-207ENST00000502987 FCARP24071 287 aa11.61□□□□□ -0.55
SNCA-207ENST00000502987 MYBPC2Q14324 1141 aa11.61□□□□□ -0.55
SNCA-207ENST00000502987 SLC39A12Q504Y0 691 aa11.61□□□□□ -0.55
SNCA-207ENST00000502987 RRAGBQ5VZM2 374 aa11.61□□□□□ -0.55
SNCA-207ENST00000502987 C9orf57Q5W0N0 161 aa11.61□□□□□ -0.55
SNCA-207ENST00000502987 CENPPQ6IPU0 288 aa11.61□□□□□ -0.55
SNCA-207ENST00000502987 SV2BQ7L1I2 683 aa11.61□□□□□ -0.55
SNCA-207ENST00000502987 SHKBP1Q8TBC3 707 aa11.61□□□□□ -0.55
SNCA-207ENST00000502987 NOC3LQ8WTT2 800 aaKnown RBP11.61□□□□□ -0.55
SNCA-207ENST00000502987 DEPDC1BQ8WUY9 529 aa11.61□□□□□ -0.55
SNCA-207ENST00000502987 POMGNT1Q8WZA1 660 aa11.61□□□□□ -0.55
SNCA-207ENST00000502987 FAM3CQ92520 227 aa11.61□□□□□ -0.55
SNCA-207ENST00000502987 RUBCNQ92622 972 aa11.61□□□□□ -0.55
SNCA-207ENST00000502987 E2F7Q96AV8 911 aa11.61□□□□□ -0.55
SNCA-207ENST00000502987 CCSER1Q9C0I3 900 aa11.61□□□□□ -0.55
SNCA-207ENST00000502987 ATXN3LQ9H3M9 355 aa11.61□□□□□ -0.55
SNCA-207ENST00000502987 MRPL44Q9H9J2 332 aaKnown RBP11.61□□□□□ -0.55
SNCA-207ENST00000502987 DPP3Q9NY33 737 aa11.61□□□□□ -0.55
SNCA-207ENST00000502987 NCDNQ9UBB6 729 aa11.61□□□□□ -0.55
SNCA-207ENST00000502987 ASB3Q9Y575 518 aa11.61□□□□□ -0.55
SNCA-207ENST00000502987 CLIC4Q9Y696 253 aa11.61□□□□□ -0.55
SNCA-207ENST00000502987 ZNF638Q14966 1978 aaKnown RBP11.61□□□□□ -0.55
SNCA-207ENST00000502987 EP300Q09472 2414 aaPredicted RBP11.6□□□□□ -0.55
SNCA-207ENST00000502987 TISP43B9A030 160 aa11.6□□□□□ -0.55
SNCA-207ENST00000502987 CYB561D2O14569 222 aa11.6□□□□□ -0.55
SNCA-207ENST00000502987 FAM189A1O60320 539 aa11.6□□□□□ -0.55
SNCA-207ENST00000502987 MOSPD3O75425 235 aa11.6□□□□□ -0.55
SNCA-207ENST00000502987 SOAT2O75908 522 aa11.6□□□□□ -0.55
SNCA-207ENST00000502987 PAX3P23760 479 aa11.6□□□□□ -0.55
SNCA-207ENST00000502987 AARSP49588 968 aaKnown RBP eCLIP11.6□□□□□ -0.55
SNCA-207ENST00000502987 KPNA1P52294 538 aaPredicted RBP11.6□□□□□ -0.55
SNCA-207ENST00000502987 PPP2R5DQ14738 602 aa11.6□□□□□ -0.55
SNCA-207ENST00000502987 VEPH1Q14D04 833 aa11.6□□□□□ -0.55
SNCA-207ENST00000502987 POSTNQ15063 836 aa11.6□□□□□ -0.55
SNCA-207ENST00000502987 ZNF528Q3MIS6 628 aa11.6□□□□□ -0.55
SNCA-207ENST00000502987 MGAT5BQ3V5L5 792 aa11.6□□□□□ -0.55
SNCA-207ENST00000502987 ARHGAP15Q53QZ3 475 aa11.6□□□□□ -0.55
SNCA-207ENST00000502987 SLC39A4Q6P5W5 647 aa11.6□□□□□ -0.55
SNCA-207ENST00000502987 TSSK4Q6SA08 328 aa11.6□□□□□ -0.55
SNCA-207ENST00000502987 USP49Q70CQ1 688 aa11.6□□□□□ -0.55
SNCA-207ENST00000502987 DNAJB7Q7Z6W7 309 aaPredicted RBP11.6□□□□□ -0.55
SNCA-207ENST00000502987 ITIH5Q86UX2 942 aa11.6□□□□□ -0.55
SNCA-207ENST00000502987 SFR1Q86XK3 245 aa11.6□□□□□ -0.55
SNCA-207ENST00000502987 MAP4K3Q8IVH8 894 aa11.6□□□□□ -0.55
SNCA-207ENST00000502987 MFSD6LQ8IWD5 586 aa11.6□□□□□ -0.55
SNCA-207ENST00000502987 MAML2Q8IZL2 1156 aaPredicted RBP11.6□□□□□ -0.55
SNCA-207ENST00000502987 SYCP3Q8IZU3 236 aa11.6□□□□□ -0.55
SNCA-207ENST00000502987 DCLK2Q8N568 766 aa11.6□□□□□ -0.55
SNCA-207ENST00000502987 CLDN23Q96B33 292 aa11.6□□□□□ -0.55
SNCA-207ENST00000502987 GCNAQ96QF7 691 aa11.6□□□□□ -0.55
SNCA-207ENST00000502987 TMEM209Q96SK2 561 aa11.6□□□□□ -0.55
SNCA-207ENST00000502987 SEPT5Q99719 369 aaPredicted RBP11.6□□□□□ -0.55
SNCA-207ENST00000502987 PYM1Q9BRP8 204 aaKnown RBP11.6□□□□□ -0.55
SNCA-207ENST00000502987 SLC4A5Q9BY07 1137 aa11.6□□□□□ -0.55
SNCA-207ENST00000502987 PANK2Q9BZ23 570 aa11.6□□□□□ -0.55
SNCA-207ENST00000502987 CRISPLD1Q9H336 500 aa11.6□□□□□ -0.55
SNCA-207ENST00000502987 ASB7Q9H672 318 aa11.6□□□□□ -0.55
SNCA-207ENST00000502987 LMAN1LQ9HAT1 526 aa11.6□□□□□ -0.55
SNCA-207ENST00000502987 TBC1D7Q9P0N9 293 aa11.6□□□□□ -0.55
SNCA-207ENST00000502987 DSEQ9UL01 958 aa11.6□□□□□ -0.55
SNCA-207ENST00000502987 EXOC7Q9UPT5 735 aa11.6□□□□□ -0.55
SNCA-207ENST00000502987 DERAQ9Y315 318 aa11.6□□□□□ -0.55
SNCA-207ENST00000502987 PIAS3Q9Y6X2 628 aa11.6□□□□□ -0.55
SNCA-207ENST00000502987 MTMR11A4FU01 709 aa11.59□□□□□ -0.55
SNCA-207ENST00000502987 PIRO00625 290 aa11.59□□□□□ -0.55
SNCA-207ENST00000502987 NRG2O14511 850 aaPredicted RBP11.59□□□□□ -0.55
SNCA-207ENST00000502987 SPTLC1O15269 473 aa11.59□□□□□ -0.55
SNCA-207ENST00000502987 VNN2O95498 520 aa11.59□□□□□ -0.55
SNCA-207ENST00000502987 FGF19O95750 216 aa11.59□□□□□ -0.55
SNCA-207ENST00000502987 ADRB2P07550 413 aa11.59□□□□□ -0.55
SNCA-207ENST00000502987 IDEP14735 1019 aa11.59□□□□□ -0.55
SNCA-207ENST00000502987 CCNE1P24864 410 aa11.59□□□□□ -0.55
SNCA-207ENST00000502987 GABRR2P28476 465 aa11.59□□□□□ -0.55
SNCA-207ENST00000502987 RPS9P46781 194 aaKnown RBP11.59□□□□□ -0.55
SNCA-207ENST00000502987 TUFMP49411 452 aaKnown RBP11.59□□□□□ -0.55
SNCA-207ENST00000502987 TAF6P49848 677 aa11.59□□□□□ -0.55
SNCA-207ENST00000502987 EPHA5P54756 1037 aa11.59□□□□□ -0.55
SNCA-207ENST00000502987 FOXK2Q01167 660 aa11.59□□□□□ -0.55
SNCA-207ENST00000502987 MTAPQ13126 283 aa11.59□□□□□ -0.55
SNCA-207ENST00000502987 GPR158Q5T848 1215 aa11.59□□□□□ -0.55
SNCA-207ENST00000502987 ZNF720Q7Z2F6 126 aa11.59□□□□□ -0.55
SNCA-207ENST00000502987 ARID3BQ8IVW6 561 aaPredicted RBP11.59□□□□□ -0.55
SNCA-207ENST00000502987 TTC8Q8TAM2 541 aa11.59□□□□□ -0.55
SNCA-207ENST00000502987 GIPC2Q8TF65 315 aa11.59□□□□□ -0.55
SNCA-207ENST00000502987 KCNN1Q92952 543 aa11.59□□□□□ -0.55
SNCA-207ENST00000502987 SECISBP2LQ93073 1101 aaKnown RBP11.59□□□□□ -0.55
SNCA-207ENST00000502987 CLIC6Q96NY7 704 aa11.59□□□□□ -0.55
SNCA-207ENST00000502987 ACCSQ96QU6 501 aa11.59□□□□□ -0.55
SNCA-207ENST00000502987 ZSCAN32Q9NX65 697 aa11.59□□□□□ -0.55
SNCA-207ENST00000502987 STK17AQ9UEE5 414 aa11.59□□□□□ -0.55
SNCA-207ENST00000502987 ANO9A1A5B4 782 aa11.58□□□□□ -0.56
SNCA-207ENST00000502987 BHMG1C9JSJ3 638 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms